Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02092.1
CDS Infomation

gene=orange1.1t02092
Sequence

ATGGGCACTTTAGTCGGTCATGTGGCACCTGGCTTTGCCTTCTTGGCACTTGGGTTATGG
CACCTTTTGAACCATATCAAGCTTCATTCTCTTCGCCCAAATTCCTACACATCAGCTCCA
TGGTTCCCCACATCAAGAATAAAGTACTTGGAGCTTTACATGATCATGTTAGGTAGCTTC
TTATCCATGGCTATGGAGCTTGTCATCGGCCCCGAAAAGCATCAACCCTTTGACACAGAT
GGAACAATTCCACCAAACCATCTTCACAACTTTGAGCATGCAACAATTTCACTCACTTTC
TTCACTTATGCAGCTCTTTCTATTGTTCTGGACAAAACTTGCTCCAAGCTCCAATATGGC
CTAACTCAATTTCTTGGAGCCATAGCCTTTGGGCAACAGTTTCTTCTTTTCCACCTTCAC
TCGGCTGATCATATGGGTGTTGAAGGCCAATATCACTTGCTTTTGCAAATTGTTGTTCTT
GTTTCTTTAATCACAACCCTTCTGGGGATTGGTTACCCAAAAAGCTTCTTGGTCAGCTTT
GTTAGGTCAGCAAGTATTTTCTTTCAAGGTGCTTGGTTTATACTCATGGGATACATGCTT
TGGACCCCGTCACTTATACCTAAAGGCTGCTTCATCAACAGTGAAGAAGGTCACCAAGTG
GTCAGATGCCATGGAGCTGAAGCTTTACATAGAGCAAAATCATTGGTCAATCTTCAATTC
AGCTGGTTCTTGATCGGTGTCACCATATTTTCAGTCTCTTTGTACTTGGTTTTGGACAAA
TTTTATGGTGATCAAAAGGTTGAGTACTCATCATTGACTAGAGAGGAAGATGAAGATTCA
GATGATGTCGAGTCACAAAAGGAACACAAACTTGATGAGTCCAAGAGTTTTATTGCCATG
GGAAAAAAAGTCTTTGCATCTGTTGACATGGAGAGGTAA

Peptide Sequence

PEP ID

orange1.1t02092.1
PEP Infomation
Sequence

MGTLVGHVAPGFAFLALGLWHLLNHIKLHSLRPNSYTSAPWFPTSRIKYLELYMIMLGSF
LSMAMELVIGPEKHQPFDTDGTIPPNHLHNFEHATISLTFFTYAALSIVLDKTCSKLQYG
LTQFLGAIAFGQQFLLFHLHSADHMGVEGQYHLLLQIVVLVSLITTLLGIGYPKSFLVSF
VRSASIFFQGAWFILMGYMLWTPSLIPKGCFINSEEGHQVVRCHGAEALHRAKSLVNLQF
SWFLIGVTIFSVSLYLVLDKFYGDQKVEYSSLTREEDEDSDDVESQKEHKLDESKSFIAM
GKKVFASVDMER*

Transcript Sequence

Transcript ID

orange1.1t02092.1
Transcript Infomation

gene=orange1.1t02092 CDS=104-1042
Sequence

CTTAAAACCCCAACCTCCCTCACAATTTTGGCTCACAATTCCTCTCCCTTGTTTGGCTCC
CGCAAAAACATATACCAATAGAGCCCCCCTCAATTAAAACATTATGGGCACTTTAGTCGG
TCATGTGGCACCTGGCTTTGCCTTCTTGGCACTTGGGTTATGGCACCTTTTGAACCATAT
CAAGCTTCATTCTCTTCGCCCAAATTCCTACACATCAGCTCCATGGTTCCCCACATCAAG
AATAAAGTACTTGGAGCTTTACATGATCATGTTAGGTAGCTTCTTATCCATGGCTATGGA
GCTTGTCATCGGCCCCGAAAAGCATCAACCCTTTGACACAGATGGAACAATTCCACCAAA
CCATCTTCACAACTTTGAGCATGCAACAATTTCACTCACTTTCTTCACTTATGCAGCTCT
TTCTATTGTTCTGGACAAAACTTGCTCCAAGCTCCAATATGGCCTAACTCAATTTCTTGG
AGCCATAGCCTTTGGGCAACAGTTTCTTCTTTTCCACCTTCACTCGGCTGATCATATGGG
TGTTGAAGGCCAATATCACTTGCTTTTGCAAATTGTTGTTCTTGTTTCTTTAATCACAAC
CCTTCTGGGGATTGGTTACCCAAAAAGCTTCTTGGTCAGCTTTGTTAGGTCAGCAAGTAT
TTTCTTTCAAGGTGCTTGGTTTATACTCATGGGATACATGCTTTGGACCCCGTCACTTAT
ACCTAAAGGCTGCTTCATCAACAGTGAAGAAGGTCACCAAGTGGTCAGATGCCATGGAGC
TGAAGCTTTACATAGAGCAAAATCATTGGTCAATCTTCAATTCAGCTGGTTCTTGATCGG
TGTCACCATATTTTCAGTCTCTTTGTACTTGGTTTTGGACAAATTTTATGGTGATCAAAA
GGTTGAGTACTCATCATTGACTAGAGAGGAAGATGAAGATTCAGATGATGTCGAGTCACA
AAAGGAACACAAACTTGATGAGTCCAAGAGTTTTATTGCCATGGGAAAAAAAGTCTTTGC
ATCTGTTGACATGGAGAGGTAAATATGAGAGATAATATACACAAAAGATAAAGCAGCTAG
AATCTATTCGAATATATTTGATTGTTAATTAGGTGTGTGTACAAAAGTAATTAGAGTTGG
TGGAATCCCACTTACTTTAATATTTAAGCCTTCAATAATGTTGGCTTAAAGAAAGCCCAT
GGCTTTGCTCTTGGTTTGCATTGAGTGTTGGAGTTCATATCTGTTTGTTTGTATAGAAAA
AAGTTACAAGTTCTTTTACTTTATATTTTTTAATTGTACCTCTCAATACCAACTTCTTGC
AGAAGATCTCTATTTGATTTGA