Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02053.2
CDS Infomation

gene=orange1.1t02053
Sequence

ATGGATCGTGATTCGGGTTCGCAGCCGCTGCTGCGGAGGACGTCGAGTAGTAGTAGGGAG
AGGAAGAGAAGCGGGAGCGGAAGGCTGAGCCTGAGTCGACGTAACTCGGTGAACGCACTC
AGGCACGAGTTTGTTTCCAAGTTGCCTGAGAAGGTGTTGGCTGGTATTGATGCCGAGGCT
CCTTTTGATGTTGACACCTCTAAAACCATAGCCTTAAGTGAAGGAGAAAAGGAATACTAT
GAATCACAATTTGCTACTCTGAAATCCTTTGAGGAAGTTGATGTTTTGGTGGATTCTGAT
TGCTTCATCGAGGAAGATCTTCAGGAACAAGTTCAACATGAAAGAGCAATGAAGATTTCT
AATTATGCCAATATTGTTTTGCTGGCGTGTAAGATATTTGCTACAATAAAGAGTGGATCC
ATAGCCATTGCTGCATCGACACTGGATTCTTTACTTGATCTAATGGCCGGTGGCATACTT
TGGTTCACTCATGTAGCGATGAAAAACATAAATATCTATAAATATCCTATTGGGAAATTG
AGGGTGCAGCCAGTAGGCATAATCATCTTTGCTGCTATAATGGCTACACTCGGGTTTCAG
GTGTTGATCGAGGCTGTAGAAAAGCTAGTTAAAGATGAACCGCCTAAAAAGATGAATACA
GTCCAATTGGAATGGTTATACTCGATCATGATCGGTGCTACTGTAGTAAAACTTGCCCTC
TGGATTTACTGCAAAAGCTCAGGAAACAAGATTGTCCGCGCATATGCTAAGGATCACTAT
TTTGATGTGGTAACAAATGTAGTAGGATTAGTTGCTGCTGTTCTTGGTGATAGTTTCTAT
TGGTGGATTGATCCTGCAGGTGCCATTCTTCTGGCAGTTTACACAATTACAAATTGGTCC
GAAACTGTTATGGAAAATGCAGTTTCACTTGTGGGACAATCGGCTCCTCCTGAAATCTTG
CAGAAATTGACATATCTTGTCATAAGGCACCCTGAAGTCAAGCGTATCGACACAGTTCGA
GCTTACACTTTCGGCGTTCTTTATTTTGTAGAGGTTGACATTGAGCTACCAGAAGAGTTA
CCGTTAAAAGAAGCACATGCAATAGGAGAGAGCTTGCAGAACAAGATTGAGAAACTCCCT
GAAGTTGAACGAGCATTTGTTCATCTTGACTATGAATGCGATCATAAGCCAGAGCACACA
GTTCTCAACAAGCTGCCCAGCAGTCAGCCCTGA

Peptide Sequence

PEP ID

orange1.1t02053.2
PEP Infomation
Sequence

MDRDSGSQPLLRRTSSSSRERKRSGSGRLSLSRRNSVNALRHEFVSKLPEKVLAGIDAEA
PFDVDTSKTIALSEGEKEYYESQFATLKSFEEVDVLVDSDCFIEEDLQEQVQHERAMKIS
NYANIVLLACKIFATIKSGSIAIAASTLDSLLDLMAGGILWFTHVAMKNINIYKYPIGKL
RVQPVGIIIFAAIMATLGFQVLIEAVEKLVKDEPPKKMNTVQLEWLYSIMIGATVVKLAL
WIYCKSSGNKIVRAYAKDHYFDVVTNVVGLVAAVLGDSFYWWIDPAGAILLAVYTITNWS
ETVMENAVSLVGQSAPPEILQKLTYLVIRHPEVKRIDTVRAYTFGVLYFVEVDIELPEEL
PLKEAHAIGESLQNKIEKLPEVERAFVHLDYECDHKPEHTVLNKLPSSQP*

Transcript Sequence

Transcript ID

orange1.1t02053.2
Transcript Infomation

gene=orange1.1t02053 CDS=204-1436
Sequence

GTAAGATCTTAAAAATGCTTTTAAAGAGTTGTGCCTTGCAATCATTATTGTCTCATCAAC
AAAACAGAAAGGCAAAATCTAATCACACTTTTCTGTTATTAAAAACCATAACTTTGAATA
GTCTATCCATCTATCTATCATCATTGGGAGGCGAGAGAGAAAGAGAGAAACACACACGTG
GGATATTGGGCCGGGTATAGAGAATGGATCGTGATTCGGGTTCGCAGCCGCTGCTGCGGA
GGACGTCGAGTAGTAGTAGGGAGAGGAAGAGAAGCGGGAGCGGAAGGCTGAGCCTGAGTC
GACGTAACTCGGTGAACGCACTCAGGCACGAGTTTGTTTCCAAGTTGCCTGAGAAGGTGT
TGGCTGGTATTGATGCCGAGGCTCCTTTTGATGTTGACACCTCTAAAACCATAGCCTTAA
GTGAAGGAGAAAAGGAATACTATGAATCACAATTTGCTACTCTGAAATCCTTTGAGGAAG
TTGATGTTTTGGTGGATTCTGATTGCTTCATCGAGGAAGATCTTCAGGAACAAGTTCAAC
ATGAAAGAGCAATGAAGATTTCTAATTATGCCAATATTGTTTTGCTGGCGTGTAAGATAT
TTGCTACAATAAAGAGTGGATCCATAGCCATTGCTGCATCGACACTGGATTCTTTACTTG
ATCTAATGGCCGGTGGCATACTTTGGTTCACTCATGTAGCGATGAAAAACATAAATATCT
ATAAATATCCTATTGGGAAATTGAGGGTGCAGCCAGTAGGCATAATCATCTTTGCTGCTA
TAATGGCTACACTCGGGTTTCAGGTGTTGATCGAGGCTGTAGAAAAGCTAGTTAAAGATG
AACCGCCTAAAAAGATGAATACAGTCCAATTGGAATGGTTATACTCGATCATGATCGGTG
CTACTGTAGTAAAACTTGCCCTCTGGATTTACTGCAAAAGCTCAGGAAACAAGATTGTCC
GCGCATATGCTAAGGATCACTATTTTGATGTGGTAACAAATGTAGTAGGATTAGTTGCTG
CTGTTCTTGGTGATAGTTTCTATTGGTGGATTGATCCTGCAGGTGCCATTCTTCTGGCAG
TTTACACAATTACAAATTGGTCCGAAACTGTTATGGAAAATGCAGTTTCACTTGTGGGAC
AATCGGCTCCTCCTGAAATCTTGCAGAAATTGACATATCTTGTCATAAGGCACCCTGAAG
TCAAGCGTATCGACACAGTTCGAGCTTACACTTTCGGCGTTCTTTATTTTGTAGAGGTTG
ACATTGAGCTACCAGAAGAGTTACCGTTAAAAGAAGCACATGCAATAGGAGAGAGCTTGC
AGAACAAGATTGAGAAACTCCCTGAAGTTGAACGAGCATTTGTTCATCTTGACTATGAAT
GCGATCATAAGCCAGAGCACACAGTTCTCAACAAGCTGCCCAGCAGTCAGCCCTGATTTT
TGGCTACCCATTGCAAGCTTTCACTCAAGTTCCACGAGTATTTTCTTTCTTCCATCGCTT
AAGTTGTTTGTATTGAGAAACAATCCAATTTTGTTGTTGAAAGATGTGCTGGTGAAGCAT
TTATGTTCCTGTTGAGTGAATCAGGTACATGACGAAGAGAATGGCACAGCGTATGTTGTA
AATCAAAAGCTTCCAGCATATACAAGATTACTTGGGTATATATATTGATTTATTCTCTTG
AAATAGCAAATGAAATGTATACATAAGTTGCTTGTTGAAGACAATAGCATTCATTGTCTC
CACTGAATCTGAAGAGAGATTCAATGTGCAGGAATGTTCTTTTTCATATCATTTTCATAA
GATAAAATTTAAGTGCATTTAGACTTTAGAGTGTCCTCCTTTTATTTTATACTTGGGCTC
CGAAAAATATTGTAAATCAGACTGAAGCTAATATTTATCATTTATCATTCTGTGATTGAG
TGGCAATGATAAGCTGAGTAAGTTTTTAATCCTAAAATGGCAGTAATTGCCTCCAAATAT
TGCATAATTCATGGTACATTTAGCTACTTGGAATCAGGTCGCATAAGAGAAATAAACAAA
TCAACACAAGGAGTAATTGCCTATCGTAAATGAACTCTGGTCACTTCAGGGCTTCCGTTC
AGTGTTCAGGACAAAACTGTAGTAATAGCAAGATTGATCGTGTGTACTGCTCCAGTACAC
AGGCTTCATTCATCTTGTCAAGGCATAATCAATCAAAACATTCCACCCAACAGAATTCCA
GAAAACACAGGTTAACGAATATCCACTTCAATCAAACCTATGTGGGTTGCAAAGGATTAA
GCTGGCATGGTAGTCAGTTGTACAAAAATTGCTGACTGTGAAACAAATTGATAAACACGA
ACGATTATCATTGCTATAGCAGTTCACATTACAGACACCAAGGTGAAAGGCCATACTTAA
GAATTTGGTAATAATCGACCATTGTACATCTTGTCAAGTAATTTCCGTGCATCGGGCCTC
CTAAGAAGACCTTTGTTATTCGGTAAACCAGTGCCTAAGCATACTGGACACACAAGTTTC
CCACGACCTGCCCACAGAAAGTATTAGTAATGG