Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02040.1
CDS Infomation

gene=orange1.1t02040
Sequence

ATGGCTTCTCTTCGTTTTCTCCTTGCAGCTGCTCTTGTAGTTGCATTTGTGCTTGAGGGA
TCATCACCAGCTCAAGCTCAACTTTCTCCCTCTTTTTATAATTCCACATGCCCTAATGTA
GCCAACATAATTCGGGAGGTGCTTCAGAATGCTTTCTTGTCCGATATTCGCATCGGTGCC
AGCCTCATCAGGCTTCATTTCCATGACTGTTTTGTTAATGGCTGTGATGCATCGATTTTG
CTGGACAATACTACTACCATAGTAAGCGAGAAATTTGCTGCGCCAAATAATAATTCGGCG
AGGGGTTTTGAAGTTGTTGATGACATGAAAGCTGCCGTTGAAAGGGCCTGTCCAGGCGTT
GTTTCCTGTGCTGATATTCTTACTATTGCAGCTGAACAATCTGTTGCTCTGTCAGGGGGT
CCTTCATGGACAAATCTATTGGGAAGGAGAGACAGCAGAACAGCCAACAGGACTCTTGCA
AATGAAAATCTTCCAGGACCGAACAATAGTCTTGAGAGGCTCAAAGATAGATTCAGAAAT
GTTGGCCTCAACGATAATTTTGATCTTGTTGCACTCTCCGGAGCTCACACATTTGGAAGG
GCTCAGTGCCGAACTTTTAGCGATAGGTTATTCAATTTCAACAGCACTGGCAATCCAGAC
CCAACACTTAACACAACCCTCTTACAACAACTAAGGCAACTATGCCCACAAGGTGGAAAC
GGCAGCGTTCTAACTAATCTTGATGTCACAACACCTGATGTGTTTGACAACAAATACTTC
TTCAATCTTCAAATACACAAGGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCC
GGGGCCGATACCGCTGCCATTGTCAATAACTTTGGCAGGAACCAGACTGCTTTCTTTGAA
AACTTTGTGACTTCAATGATAAGAATGGGCAATTTGAAACCACTGACAGGAAATCAAGGG
GAGATTAGATTGAACTGCAGGAGGGTCAACGGAAACAGCAATATCGCAACAAGATCATCA
TCATCGGAGGGTGATTTGGTCAGCTCTTTCTGA

Peptide Sequence

PEP ID

orange1.1t02040.1
PEP Infomation
Sequence

MASLRFLLAAALVVAFVLEGSSPAQAQLSPSFYNSTCPNVANIIREVLQNAFLSDIRIGA
SLIRLHFHDCFVNGCDASILLDNTTTIVSEKFAAPNNNSARGFEVVDDMKAAVERACPGV
VSCADILTIAAEQSVALSGGPSWTNLLGRRDSRTANRTLANENLPGPNNSLERLKDRFRN
VGLNDNFDLVALSGAHTFGRAQCRTFSDRLFNFNSTGNPDPTLNTTLLQQLRQLCPQGGN
GSVLTNLDVTTPDVFDNKYFFNLQIHKGLLQSDQELFSTPGADTAAIVNNFGRNQTAFFE
NFVTSMIRMGNLKPLTGNQGEIRLNCRRVNGNSNIATRSSSSEGDLVSSF*

Transcript Sequence

Transcript ID

orange1.1t02040.1
Transcript Infomation

gene=orange1.1t02040 CDS=114-1166
Sequence

TGTGAAACTTCTTAGTCGTTCCCAAGTCTACTCCTGTTTAGCTTGGTTGGCTATAAATAA
AGAGGCGCATATATAGAAGGCTTAGAAATAACTCTCATTCTCATCATTGCAAAATGGCTT
CTCTTCGTTTTCTCCTTGCAGCTGCTCTTGTAGTTGCATTTGTGCTTGAGGGATCATCAC
CAGCTCAAGCTCAACTTTCTCCCTCTTTTTATAATTCCACATGCCCTAATGTAGCCAACA
TAATTCGGGAGGTGCTTCAGAATGCTTTCTTGTCCGATATTCGCATCGGTGCCAGCCTCA
TCAGGCTTCATTTCCATGACTGTTTTGTTAATGGCTGTGATGCATCGATTTTGCTGGACA
ATACTACTACCATAGTAAGCGAGAAATTTGCTGCGCCAAATAATAATTCGGCGAGGGGTT
TTGAAGTTGTTGATGACATGAAAGCTGCCGTTGAAAGGGCCTGTCCAGGCGTTGTTTCCT
GTGCTGATATTCTTACTATTGCAGCTGAACAATCTGTTGCTCTGTCAGGGGGTCCTTCAT
GGACAAATCTATTGGGAAGGAGAGACAGCAGAACAGCCAACAGGACTCTTGCAAATGAAA
ATCTTCCAGGACCGAACAATAGTCTTGAGAGGCTCAAAGATAGATTCAGAAATGTTGGCC
TCAACGATAATTTTGATCTTGTTGCACTCTCCGGAGCTCACACATTTGGAAGGGCTCAGT
GCCGAACTTTTAGCGATAGGTTATTCAATTTCAACAGCACTGGCAATCCAGACCCAACAC
TTAACACAACCCTCTTACAACAACTAAGGCAACTATGCCCACAAGGTGGAAACGGCAGCG
TTCTAACTAATCTTGATGTCACAACACCTGATGTGTTTGACAACAAATACTTCTTCAATC
TTCAAATACACAAGGGCCTTCTGCAGAGTGATCAAGAGTTGTTTTCGACTCCCGGGGCCG
ATACCGCTGCCATTGTCAATAACTTTGGCAGGAACCAGACTGCTTTCTTTGAAAACTTTG
TGACTTCAATGATAAGAATGGGCAATTTGAAACCACTGACAGGAAATCAAGGGGAGATTA
GATTGAACTGCAGGAGGGTCAACGGAAACAGCAATATCGCAACAAGATCATCATCATCGG
AGGGTGATTTGGTCAGCTCTTTCTGAATAAGCTAGTTTGCAGCTAACGCGAGAGAAAGAG
TTTGTGGGTAACAAACTCATGAATTTACTCCTATGTTTTGCCTGAAACATGCTTTGTATT
TTCAATAAACTAAAGTTGTGGTTGTGTATTCACGTCCTGCTTTCTATGTATCAGAAATCC
TTGTCATATTGTATGTGTTTCTTTTTTCTTTTCTTTTTTTTCTCCCGAAGTCATCGATAT
GTATTTTCATTTGAGTCACTTACAAGTTTTTAATAACCCACTTTATCCTCTAGCTTTAAA
ACATTAACCGGAAAAACACCTTC