Gene sequences

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Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	orange1.1t02028.1
CDS Infomation	gene=orange1.1t02028
Sequence	ATGGCATCATTGGAAGAACTTCTATTAGCGGATGGATTTAAAGGGAGAAGATCATCGGTG ACAAGCTCGAGACCATCCTTTCGCGAAGAAGCTATGAGTATGCCCGTCTACCCTTTTGGT GACAAAAACAAAGCAGCTTCTTCATCAAGCAGCAGAATCAAGACTGAGAGGGCAAGGTCT GATCTGTCGCGATATACTTTGAAAAGTGATTCCCCAAGAATTAGTAATCTTAGTGGTAGA AGGCCGAGGGATAGTCTTGTTAGAAGAGAGAAAGTAGACAGCGGGTCAATGAAAGAACAC AGGGAGAGACTTGCAGGAAGACGATCTGTTGATGTACAAGAAAGAAGAAGATCAAATGCT AAGTCCTCAGAAACTTCTCAGGAAAATGAGATTGTTGAGGTTTCCGGGGAAGAAAGTCAG AGAGTTAGCATTAATTTGGACACGAGGCATAGCAATGTTGATAATAGGAAAAGCATGAAA GAGAATGAGCCTGGTAATGATAGATATAACCGAAGTTCAATGAGCAGAAAAAGTATTAAA GAAAATTATAGAAAGCATGAGAGTGTTTTGGCTCCAGCTTCTGAACCTGCTCTAGATGAA GTTGCTGTGCAGGCCATAGTATCTATCCTTAGTGGCTATGTCAAAAGTTTTCTGAAAAAT GAGGATTTTCGAGCCACCCTTCGCCGTAAGTGTTTCTCTTCCCTTAATTTTATCGAACCT GAGGATGAGGGTAATAGTAATGAAAGCAAGGTGATAGCTAGTCTTGAACAAGCAATTGAA ACTGTGCAAAGAGCAGCTGAGGAATCTGCAAGTTCAAAAGAATTAAAAAAGGCCTCGCTT CAGCTTAGCATGATCACGGGGATGAGTGCAAATGATTTGAAGGATGGCTCCACTTCTGGG GTTCCCAATTCTAAGCTGTCAGCCTGTGCTCATCTTTACCTCAGTGTGATATATAAGATA CAAAAGAAGGACCGAGTCTCAGCGAAGCACCTTTTACAAGTGTTTTGTGATTCACCATTT ATGGCAAGAACAACATTATTGCCTGAACTTTGGGACTATTTAATATCTCCGCATCTTGCA CATTTGAAGGCGTGGTATAAGCAGGAAGCTGATTCTTTAGCAGATGAGTCAAACAAGCCC AGGAAAATGAAGCTGCTTGAGAAAGTATACAATGAAATTTTGGATTCGGGCACTTATCAG TTTGCAGTTTACTACAAGGATTGGCTCACTGAAGGGATTGAAGATCCTTCCGTACCTACA ATCCAAATTCCATCGTTGTCTGTTCAAAGACATCAGCGAAAAGGTTCCTTTGGTAATTCT TCAGAGGTAGCTAGCCCTGCTGCTGCCTTCTCCCCACAGCCAACGGTCAGTAAGAAGCTA TACGACGCTGTATTTGAACGAGCAAGTAAACCCAGGGTTGACGCGGCTGAAGATGATGGC GAAATGGAGAACTTTGATAATTACGCAAGAAGCTCTGGTGGTTCTACCGTCGAAAAACGA ACATTAACATACTCTTCCGAAATTGTTAAATGTACATATCAAGATACCGAGGATGATTCA CCTAAGATTGCCCAAGATGATCTATTCCACCCAGAAGATGAACTATTATTGGCAGCTGAG GAAGGCTGGAGGTTGCCTGGAGTGAAATATCCGGCTGAAAGAAATATAAACAGTAACATT AACATCTGTTGTACGAGTAAAAAAATTCAAACTATTAAGCTATATACACCTCCAGATACA AAAGCAAATGAGCTCACACTCAAGAGGCTAGCAAAATCTGCTTTCGAACAGCAGCAAACT GAGGGTTGCACTGCTCTTACCATTTCTAGTCCTCCGAGTACTAGCGAGGCACCAGTCAAC TTGAGACCCTCCTTTGAAGAGTTGCATGAAAATGATGAATATTTTGATAAAGGATCCTTC TTGACAAGCATTCCTCAAGACTTCATTTGTCCCTTGACTGGACAGTTGTTCGAAGAACCA GTGACTTTGGAAAGTGGTCAAACATTTGAATGTGAGGCCATCAAAGAATGGATTGAACAA GGAAACAGAACATGTCCTGTGACAGGAAAATATTTGGCATGTCCATCATTGCCACTCACT AACTTTATTTTGAAGCGCGTAATTGATGGTTGGAAATCAGAGAATTGCATGCATCTCTTG GCTTTTGCCTTTCAAATAGTGGAGAAATCAAGGATGAATGAGTCAAAAAATGGCGATGAA ACAGCTATATTTATATTAGAGCAGCTTCTTACTGTTTTCAGTGATCAGGAGAGAATAACA AATGCGAAGCACCTTATTTCTATTGGAGGCTTGCAGTTTCTTATTTGCAGGTTTGAGTCC GGGAAGTTAGAAGAGAAGGCACGAGTGGCAGCTCTCATGTGCTGTTGTATTGAAGCAGAT GCAGGATGCAGAAACCAGATGGCAAGAAATATTAATGTATACTCTCTCCTCGAGCTGCTT CACAGCAAGCAAGTGAAGCCGAGAACAAATACGGTGTTGCTGCTGATTGACCTGATTTGC TTGAGCAGGAGGAGAGATGTTTCGACACTTCTAAGAAATGTGCAGAATGAAGAGTTAGTG AATGCAATGCATGTTTTACTTTTGTATCTCCAGCGCTCCCCACCTGAACAAAGACCCTTG TTTTCAATACTTCTGTTGCACTTAGATCTTCTGGTAGAACCTCGGAAGTACAGTATATAT AGAGAGGCAGCTGTGGATGCCATTACAGTGGCGCTGGAAGAAAGCCTAACAGATGAGAAG ATTCAAGAAAAGTGTTGCCGAGCACTCCTTATTCTTGGTGGACGGTTCTCTTTCTCCAGA GAAGTGGCGAATGAGAGTTGGATCCTAAAGCCAGCAGGATTTAATGATCGCTGTGAAGGG AATTCTCTCGACAATGATGAAAATGATTTACCCGTTGATGATTCTACTCCTTTGGATGAT GAAGAACAAGCCAGTGAAGAGTGGTTGCGTAAACTGTCCGCGTCATTGCTTGGTAACAGG AAAAGATCATTTCTAGAGACTGTCTCCAAGATCTTAGGTTCCAGGAACTCGGATTTGGTA AGTGTGTGCCTAACAACAGTGGCATGGTTGAGCCATGCACTTTCCGCGCAACCTGATGCT GAATTCCAGCTCTCGGCATTCTCAGCCGTCATCTCTCAGCTGAAAGAAATACTTCAAAAT GGGGAACAGCCTCAGCAAAAAGTTCTTGCCTCAATGTCATTACTCAATTTCAGCAAAATC CCAGAATGTGGTGCCGTGTTGAAGACAATTGCGGCGGAGATCAGGATTCCTTTACAAAGC CTAACTGAAGTAACATGGACGACGCAAGAGCTATGCGCCATCATTGCGGGAAGATCTCTA ATCTCGTAG

Peptide Sequence

PEP ID	orange1.1t02028.1
PEP Infomation
Sequence	MASLEELLLADGFKGRRSSVTSSRPSFREEAMSMPVYPFGDKNKAASSSSSRIKTERARS DLSRYTLKSDSPRISNLSGRRPRDSLVRREKVDSGSMKEHRERLAGRRSVDVQERRRSNA KSSETSQENEIVEVSGEESQRVSINLDTRHSNVDNRKSMKENEPGNDRYNRSSMSRKSIK ENYRKHESVLAPASEPALDEVAVQAIVSILSGYVKSFLKNEDFRATLRRKCFSSLNFIEP EDEGNSNESKVIASLEQAIETVQRAAEESASSKELKKASLQLSMITGMSANDLKDGSTSG VPNSKLSACAHLYLSVIYKIQKKDRVSAKHLLQVFCDSPFMARTTLLPELWDYLISPHLA HLKAWYKQEADSLADESNKPRKMKLLEKVYNEILDSGTYQFAVYYKDWLTEGIEDPSVPT IQIPSLSVQRHQRKGSFGNSSEVASPAAAFSPQPTVSKKLYDAVFERASKPRVDAAEDDG EMENFDNYARSSGGSTVEKRTLTYSSEIVKCTYQDTEDDSPKIAQDDLFHPEDELLLAAE EGWRLPGVKYPAERNINSNINICCTSKKIQTIKLYTPPDTKANELTLKRLAKSAFEQQQT EGCTALTISSPPSTSEAPVNLRPSFEELHENDEYFDKGSFLTSIPQDFICPLTGQLFEEP VTLESGQTFECEAIKEWIEQGNRTCPVTGKYLACPSLPLTNFILKRVIDGWKSENCMHLL AFAFQIVEKSRMNESKNGDETAIFILEQLLTVFSDQERITNAKHLISIGGLQFLICRFES GKLEEKARVAALMCCCIEADAGCRNQMARNINVYSLLELLHSKQVKPRTNTVLLLIDLIC LSRRRDVSTLLRNVQNEELVNAMHVLLLYLQRSPPEQRPLFSILLLHLDLLVEPRKYSIY REAAVDAITVALEESLTDEKIQEKCCRALLILGGRFSFSREVANESWILKPAGFNDRCEG NSLDNDENDLPVDDSTPLDDEEQASEEWLRKLSASLLGNRKRSFLETVSKILGSRNSDLV SVCLTTVAWLSHALSAQPDAEFQLSAFSAVISQLKEILQNGEQPQQKVLASMSLLNFSKI PECGAVLKTIAAEIRIPLQSLTEVTWTTQELCAIIAGRSLIS*

Transcript Sequence

Transcript ID	orange1.1t02028.1
Transcript Infomation	gene=orange1.1t02028 CDS=1-3369
Sequence	ATGGCATCATTGGAAGAACTTCTATTAGCGGATGGATTTAAAGGGAGAAGATCATCGGTG ACAAGCTCGAGACCATCCTTTCGCGAAGAAGCTATGAGTATGCCCGTCTACCCTTTTGGT GACAAAAACAAAGCAGCTTCTTCATCAAGCAGCAGAATCAAGACTGAGAGGGCAAGGTCT GATCTGTCGCGATATACTTTGAAAAGTGATTCCCCAAGAATTAGTAATCTTAGTGGTAGA AGGCCGAGGGATAGTCTTGTTAGAAGAGAGAAAGTAGACAGCGGGTCAATGAAAGAACAC AGGGAGAGACTTGCAGGAAGACGATCTGTTGATGTACAAGAAAGAAGAAGATCAAATGCT AAGTCCTCAGAAACTTCTCAGGAAAATGAGATTGTTGAGGTTTCCGGGGAAGAAAGTCAG AGAGTTAGCATTAATTTGGACACGAGGCATAGCAATGTTGATAATAGGAAAAGCATGAAA GAGAATGAGCCTGGTAATGATAGATATAACCGAAGTTCAATGAGCAGAAAAAGTATTAAA GAAAATTATAGAAAGCATGAGAGTGTTTTGGCTCCAGCTTCTGAACCTGCTCTAGATGAA GTTGCTGTGCAGGCCATAGTATCTATCCTTAGTGGCTATGTCAAAAGTTTTCTGAAAAAT GAGGATTTTCGAGCCACCCTTCGCCGTAAGTGTTTCTCTTCCCTTAATTTTATCGAACCT GAGGATGAGGGTAATAGTAATGAAAGCAAGGTGATAGCTAGTCTTGAACAAGCAATTGAA ACTGTGCAAAGAGCAGCTGAGGAATCTGCAAGTTCAAAAGAATTAAAAAAGGCCTCGCTT CAGCTTAGCATGATCACGGGGATGAGTGCAAATGATTTGAAGGATGGCTCCACTTCTGGG GTTCCCAATTCTAAGCTGTCAGCCTGTGCTCATCTTTACCTCAGTGTGATATATAAGATA CAAAAGAAGGACCGAGTCTCAGCGAAGCACCTTTTACAAGTGTTTTGTGATTCACCATTT ATGGCAAGAACAACATTATTGCCTGAACTTTGGGACTATTTAATATCTCCGCATCTTGCA CATTTGAAGGCGTGGTATAAGCAGGAAGCTGATTCTTTAGCAGATGAGTCAAACAAGCCC AGGAAAATGAAGCTGCTTGAGAAAGTATACAATGAAATTTTGGATTCGGGCACTTATCAG TTTGCAGTTTACTACAAGGATTGGCTCACTGAAGGGATTGAAGATCCTTCCGTACCTACA ATCCAAATTCCATCGTTGTCTGTTCAAAGACATCAGCGAAAAGGTTCCTTTGGTAATTCT TCAGAGGTAGCTAGCCCTGCTGCTGCCTTCTCCCCACAGCCAACGGTCAGTAAGAAGCTA TACGACGCTGTATTTGAACGAGCAAGTAAACCCAGGGTTGACGCGGCTGAAGATGATGGC GAAATGGAGAACTTTGATAATTACGCAAGAAGCTCTGGTGGTTCTACCGTCGAAAAACGA ACATTAACATACTCTTCCGAAATTGTTAAATGTACATATCAAGATACCGAGGATGATTCA CCTAAGATTGCCCAAGATGATCTATTCCACCCAGAAGATGAACTATTATTGGCAGCTGAG GAAGGCTGGAGGTTGCCTGGAGTGAAATATCCGGCTGAAAGAAATATAAACAGTAACATT AACATCTGTTGTACGAGTAAAAAAATTCAAACTATTAAGCTATATACACCTCCAGATACA AAAGCAAATGAGCTCACACTCAAGAGGCTAGCAAAATCTGCTTTCGAACAGCAGCAAACT GAGGGTTGCACTGCTCTTACCATTTCTAGTCCTCCGAGTACTAGCGAGGCACCAGTCAAC TTGAGACCCTCCTTTGAAGAGTTGCATGAAAATGATGAATATTTTGATAAAGGATCCTTC TTGACAAGCATTCCTCAAGACTTCATTTGTCCCTTGACTGGACAGTTGTTCGAAGAACCA GTGACTTTGGAAAGTGGTCAAACATTTGAATGTGAGGCCATCAAAGAATGGATTGAACAA GGAAACAGAACATGTCCTGTGACAGGAAAATATTTGGCATGTCCATCATTGCCACTCACT AACTTTATTTTGAAGCGCGTAATTGATGGTTGGAAATCAGAGAATTGCATGCATCTCTTG GCTTTTGCCTTTCAAATAGTGGAGAAATCAAGGATGAATGAGTCAAAAAATGGCGATGAA ACAGCTATATTTATATTAGAGCAGCTTCTTACTGTTTTCAGTGATCAGGAGAGAATAACA AATGCGAAGCACCTTATTTCTATTGGAGGCTTGCAGTTTCTTATTTGCAGGTTTGAGTCC GGGAAGTTAGAAGAGAAGGCACGAGTGGCAGCTCTCATGTGCTGTTGTATTGAAGCAGAT GCAGGATGCAGAAACCAGATGGCAAGAAATATTAATGTATACTCTCTCCTCGAGCTGCTT CACAGCAAGCAAGTGAAGCCGAGAACAAATACGGTGTTGCTGCTGATTGACCTGATTTGC TTGAGCAGGAGGAGAGATGTTTCGACACTTCTAAGAAATGTGCAGAATGAAGAGTTAGTG AATGCAATGCATGTTTTACTTTTGTATCTCCAGCGCTCCCCACCTGAACAAAGACCCTTG TTTTCAATACTTCTGTTGCACTTAGATCTTCTGGTAGAACCTCGGAAGTACAGTATATAT AGAGAGGCAGCTGTGGATGCCATTACAGTGGCGCTGGAAGAAAGCCTAACAGATGAGAAG ATTCAAGAAAAGTGTTGCCGAGCACTCCTTATTCTTGGTGGACGGTTCTCTTTCTCCAGA GAAGTGGCGAATGAGAGTTGGATCCTAAAGCCAGCAGGATTTAATGATCGCTGTGAAGGG AATTCTCTCGACAATGATGAAAATGATTTACCCGTTGATGATTCTACTCCTTTGGATGAT GAAGAACAAGCCAGTGAAGAGTGGTTGCGTAAACTGTCCGCGTCATTGCTTGGTAACAGG AAAAGATCATTTCTAGAGACTGTCTCCAAGATCTTAGGTTCCAGGAACTCGGATTTGGTA AGTGTGTGCCTAACAACAGTGGCATGGTTGAGCCATGCACTTTCCGCGCAACCTGATGCT GAATTCCAGCTCTCGGCATTCTCAGCCGTCATCTCTCAGCTGAAAGAAATACTTCAAAAT GGGGAACAGCCTCAGCAAAAAGTTCTTGCCTCAATGTCATTACTCAATTTCAGCAAAATC CCAGAATGTGGTGCCGTGTTGAAGACAATTGCGGCGGAGATCAGGATTCCTTTACAAAGC CTAACTGAAGTAACATGGACGACGCAAGAGCTATGCGCCATCATTGCGGGAAGATCTCTA ATCTCGTAGGAAAGTTAAAGAAACAGTACTCAGAAAACATTTTACATAAAACAATAATTG ACTGAATTTCTTGAGTAAATTTATCATCAACTTCTGAGGTTTTCTCTAGAGCAAAATCAA TGGCTTAGCTTCCTTTTGATCCTGAGGAGACAATTTCAGACTTGTATTATAAATCTTGTA CTGCTTTGGACATTTCCATGTTGAATATTTGTATGTACATTGGAGCTG