Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02024.2
CDS Infomation

gene=orange1.1t02024
Sequence

ATGGGAGCTGGTGGCCCTTCACTCCAGCGGGAGAAGAAGGAAAGCCTTATCCAGCCTGCA
CCACATACAAAGCCTCCATTCACCCTTAGCCAAATCAAGAAAGCTATCCCACCCCACTGC
TTCAAGCGCTCCCTCCTCCGATCATTCTCTTACGTCGTTTACGACCTCTCCTTTTCCTTC
CTCTTCTACTACACTGCCACCAATTACTTCCACCTCCTCCCTTCCCCATTTGCCTACCTT
GCTTGGCCCATTTACTGGATATTCCAAGGCTGTGTTCTTACCGGTGTTTGGGTCATTGCT
CACGAGTGTGGCCACCATGCCTTTAGTGACTACCAATGGGTTGACGATACCGTTGGCCTA
ATCCTGCACTCTGCCCTTTTAGTTCCATACTTCTCATGGAAGTACAGTCATCGCCGCCAC
CATTCCAACACCGCATCCCTTGAGCGCGATGAAGTGTTTGTCCCAAAAACCAAGTCCGAA
GTCCCATTTTACTCCAAATACTTCAACAACCCCCCAGGCCGAGCTCTCACCCTTCTAGTC
ACACTCACTCTTGGCTGGCCCTTATACTTAGCCTTGAATGTTTCCGGCAGGCCCTACGAC
CGTTTTGCTTGTCACTTTGATCCCAAGAGCCCCATCTACTCAGATCGCGAGAGGCTCCAG
ATATACATTTCTGATGCCGGAATCTTTGCTGCAACTTACGTCCTCTATCGCGTTGCCATG
GCAAAAGGACTGGCCTGGCTTATATGCGTGTATGGGGTACCGCTACTCATTGTGAATGGC
TTTCTTGTACTGATCACATACTTGCAGCACACGCATCCTGCACTGCCGCACTACAACTCA
TCCGAATGGGACTGGCTGAGGGGGGCTCTCTCGACTGTCGATAGAGATTACGGCGTGTTG
AACAAAGTCTTCCATAACATTACAGATACACATGTAGCTCACCATCTCTTCTCAACCATG
CCACATTACCATGCTATGGAGGCGACAATCGCGATGAAGCCAATCCTCGGCGAGTATTAC
CAGTTCGATGGGATGCCCTTTTACAAGGCGGCGTGGCGGGAGGCGAAAGAGTGTCTTTAC
GTAGAACCGGACGAGAATTCTCCGACCAAAGGCCTTTTCTGGTACAGGAACAAACTGTGA

Peptide Sequence

PEP ID

orange1.1t02024.2
PEP Infomation
Sequence

MGAGGPSLQREKKESLIQPAPHTKPPFTLSQIKKAIPPHCFKRSLLRSFSYVVYDLSFSF
LFYYTATNYFHLLPSPFAYLAWPIYWIFQGCVLTGVWVIAHECGHHAFSDYQWVDDTVGL
ILHSALLVPYFSWKYSHRRHHSNTASLERDEVFVPKTKSEVPFYSKYFNNPPGRALTLLV
TLTLGWPLYLALNVSGRPYDRFACHFDPKSPIYSDRERLQIYISDAGIFAATYVLYRVAM
AKGLAWLICVYGVPLLIVNGFLVLITYLQHTHPALPHYNSSEWDWLRGALSTVDRDYGVL
NKVFHNITDTHVAHHLFSTMPHYHAMEATIAMKPILGEYYQFDGMPFYKAAWREAKECLY
VEPDENSPTKGLFWYRNKL*

Transcript Sequence

Transcript ID

orange1.1t02024.2
Transcript Infomation

gene=orange1.1t02024 CDS=222-1361
Sequence

TAGCCAACTCAAAAAGAGTTACCAAAAGGGCAACTCATACACACACACACGCGCATTGAC
AGAGAAAGAGAAAGAGAGAGAGAGAGAGTGAGTGGAGAAGAAGAAGGCAAAAGGAGAGAG
AAAAAAGCGCTTCTTCTCAGCAAGAAGTGCTTCTAGGGAAAGCACTTCTTTTTCTTTTTT
TCTTTTTTTAAAAAGGTTTTTCAAAGCAAGCAGGCAACACAATGGGAGCTGGTGGCCCTT
CACTCCAGCGGGAGAAGAAGGAAAGCCTTATCCAGCCTGCACCACATACAAAGCCTCCAT
TCACCCTTAGCCAAATCAAGAAAGCTATCCCACCCCACTGCTTCAAGCGCTCCCTCCTCC
GATCATTCTCTTACGTCGTTTACGACCTCTCCTTTTCCTTCCTCTTCTACTACACTGCCA
CCAATTACTTCCACCTCCTCCCTTCCCCATTTGCCTACCTTGCTTGGCCCATTTACTGGA
TATTCCAAGGCTGTGTTCTTACCGGTGTTTGGGTCATTGCTCACGAGTGTGGCCACCATG
CCTTTAGTGACTACCAATGGGTTGACGATACCGTTGGCCTAATCCTGCACTCTGCCCTTT
TAGTTCCATACTTCTCATGGAAGTACAGTCATCGCCGCCACCATTCCAACACCGCATCCC
TTGAGCGCGATGAAGTGTTTGTCCCAAAAACCAAGTCCGAAGTCCCATTTTACTCCAAAT
ACTTCAACAACCCCCCAGGCCGAGCTCTCACCCTTCTAGTCACACTCACTCTTGGCTGGC
CCTTATACTTAGCCTTGAATGTTTCCGGCAGGCCCTACGACCGTTTTGCTTGTCACTTTG
ATCCCAAGAGCCCCATCTACTCAGATCGCGAGAGGCTCCAGATATACATTTCTGATGCCG
GAATCTTTGCTGCAACTTACGTCCTCTATCGCGTTGCCATGGCAAAAGGACTGGCCTGGC
TTATATGCGTGTATGGGGTACCGCTACTCATTGTGAATGGCTTTCTTGTACTGATCACAT
ACTTGCAGCACACGCATCCTGCACTGCCGCACTACAACTCATCCGAATGGGACTGGCTGA
GGGGGGCTCTCTCGACTGTCGATAGAGATTACGGCGTGTTGAACAAAGTCTTCCATAACA
TTACAGATACACATGTAGCTCACCATCTCTTCTCAACCATGCCACATTACCATGCTATGG
AGGCGACAATCGCGATGAAGCCAATCCTCGGCGAGTATTACCAGTTCGATGGGATGCCCT
TTTACAAGGCGGCGTGGCGGGAGGCGAAAGAGTGTCTTTACGTAGAACCGGACGAGAATT
CTCCGACCAAAGGCCTTTTCTGGTACAGGAACAAACTGTGATAACATGTCTGCTGGTAAG
TTTGATGAAGATGTAGTTACAGTTTAATTAAGTACTATTTGAGCAGTGGTTTCCAAAGTT
GTTCAGCAAATAAATAAATTTTTTTTTTAAAAAAAAGCTCTCGGTACTTGGTTTGTAATG
GTCCTGTATTAAACATTTTAAGTACTTAAGAACTCTAATTATGTGTGTGTGACATAAAAT
TTCTCCTAATCTGCAATTACTAAGCACAGTGAATAGTAGAATTGTTGAATGCAGTTAATT
ATTTTTCACAG