Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02020.1
CDS Infomation

gene=orange1.1t02020
Sequence

ATGGAGCTCGGTGGCGGCCGCAAGAGGGGAAGGCATGACGGTGCCTCGAATGGCAATGGC
GGCTTTAAGAAATCAAAGCAAGAAATGGAGAACTTTCCAACTGGTATAGGAAGCAAATCG
AAGCCATGCACAAAGTTTTTCAGTACTTCTGGGTGCCCTTTCGGAGAGGGATGTCACTTC
TTGCATTACGTTCCTGGTGGTTTCAAAGCTGTCTCCCAGATGCTGAATCTTGGTGGCACC
CCTGCTCATCCACCACCACCTCCTAGAAATTCAGGAGCCCCACCATCCTTTCCAGATGGC
TCATCTCCCCCAGCTGTGAAATCTCGTTTGTGCAACAAATACAACTCAGCTGAAGGTTGC
AAGTTTGGCGATAAATGCCATTTTGCTCATGGTGAATGGGAGCTTGGCAGGCCAACTGTG
CCATCCTATGAAGATCCTCGTGCCATGGGAGGACCGATGCATGGCAGGATGGGTGGTCGG
CTTGAGCCTCCTCCACAATCACTGGGAGCTGCAGCCAGTTTTGGGGCCTCGGCCACTGCT
AAGATTAGCATTGACGCTAAGCTTGCAGGAGCTATCATTGGCAAAAATGGTGTGAACTCC
AAGCAAATCTGTCGCCTTACCGGAGCCAAGCTTTCCATCAGAGATCATGAGGTTGATCCC
AACTTAAGGAACATTGAGCTTGAGGGGACATTCGATCAGATCAAGCAAGCCAGTGCTATG
GTTCGTGAGTTAATCGTAAATGTTGGTTCTGGTTCTGGACATTCAATGAAGTCAAATTCC
TCTTCTCAGTCAAACAACTTCAAGACGAAGCTCTGTGAGAACTTTGCAAAAGGGTCTTGT
ACCTTCGGCGATAGGTGCCACTTTGCACACGGATCTGAGGAATTGCGCAAATCAGTGATA
TGA

Peptide Sequence

PEP ID

orange1.1t02020.1
PEP Infomation
Sequence

MELGGGRKRGRHDGASNGNGGFKKSKQEMENFPTGIGSKSKPCTKFFSTSGCPFGEGCHF
LHYVPGGFKAVSQMLNLGGTPAHPPPPPRNSGAPPSFPDGSSPPAVKSRLCNKYNSAEGC
KFGDKCHFAHGEWELGRPTVPSYEDPRAMGGPMHGRMGGRLEPPPQSLGAAASFGASATA
KISIDAKLAGAIIGKNGVNSKQICRLTGAKLSIRDHEVDPNLRNIELEGTFDQIKQASAM
VRELIVNVGSGSGHSMKSNSSSQSNNFKTKLCENFAKGSCTFGDRCHFAHGSEELRKSVI
*

Transcript Sequence

Transcript ID

orange1.1t02020.1
Transcript Infomation

gene=orange1.1t02020 CDS=1-903
Sequence

ATGGAGCTCGGTGGCGGCCGCAAGAGGGGAAGGCATGACGGTGCCTCGAATGGCAATGGC
GGCTTTAAGAAATCAAAGCAAGAAATGGAGAACTTTCCAACTGGTATAGGAAGCAAATCG
AAGCCATGCACAAAGTTTTTCAGTACTTCTGGGTGCCCTTTCGGAGAGGGATGTCACTTC
TTGCATTACGTTCCTGGTGGTTTCAAAGCTGTCTCCCAGATGCTGAATCTTGGTGGCACC
CCTGCTCATCCACCACCACCTCCTAGAAATTCAGGAGCCCCACCATCCTTTCCAGATGGC
TCATCTCCCCCAGCTGTGAAATCTCGTTTGTGCAACAAATACAACTCAGCTGAAGGTTGC
AAGTTTGGCGATAAATGCCATTTTGCTCATGGTGAATGGGAGCTTGGCAGGCCAACTGTG
CCATCCTATGAAGATCCTCGTGCCATGGGAGGACCGATGCATGGCAGGATGGGTGGTCGG
CTTGAGCCTCCTCCACAATCACTGGGAGCTGCAGCCAGTTTTGGGGCCTCGGCCACTGCT
AAGATTAGCATTGACGCTAAGCTTGCAGGAGCTATCATTGGCAAAAATGGTGTGAACTCC
AAGCAAATCTGTCGCCTTACCGGAGCCAAGCTTTCCATCAGAGATCATGAGGTTGATCCC
AACTTAAGGAACATTGAGCTTGAGGGGACATTCGATCAGATCAAGCAAGCCAGTGCTATG
GTTCGTGAGTTAATCGTAAATGTTGGTTCTGGTTCTGGACATTCAATGAAGTCAAATTCC
TCTTCTCAGTCAAACAACTTCAAGACGAAGCTCTGTGAGAACTTTGCAAAAGGGTCTTGT
ACCTTCGGCGATAGGTGCCACTTTGCACACGGATCTGAGGAATTGCGCAAATCAGTGATA
TGACCTTGCTTTTGTTTCATCTTGTTCCCTTTATGTGTTAGGACTAATTTGTTGTCATAG
CCTTTGTATTTGGCGTGTCTATTAAGTTTTGCTTTTTCGGATGCAAAAATTAGACATACT
GCAGATGCACAAGAGTTAGTTTCTTTCTTATTAATTTTTTTAGTGTATTTGTTTTATGTG
AGACTTTCTAGTTTATATTTTCAT