Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02015.1
CDS Infomation

gene=orange1.1t02015
Sequence

ATGGCGGCAACAGCAGCTTGTAGCCTTCAAATGGCAGCAGTAAAGCCATGCATTTCCTCT
TCTCACAGAGGTGTCAAAGCAGGTGTTGCAGTTGTTGGTGGCAACTCTAAGGGGGCATCG
TGGACCAAGCTTTCTAGTGCTTCTCACATATCATCTGGGCAACCTTTCCTGCGGAGTTTT
ACATCATCTTCAGTAAAATTTGATAAGGTTGTAACAAGGGCAATGGCTGAATCTAGCACT
AACAAGCCTATTTCCGGATTGCCTATTGATTTGAAAGGTAAGAGGGCATTTATTGCTGGT
GTAGCTGACGACAACGGATATGGTTGGGCTATAGCAAAATCTCTTGCTGCTGCAGGAGCT
GAAATTTTGGTTGGAACATGGGTTCCTGCTTTGAACATTTTTGAAACCAGTCTGCGACGT
GGAAAATTTGATGAATCTCGTGTGTTGCCAGATGGTTCTTTGATGGAAATCACTAAAATA
TATCCCCTAGATGCTATCTATGACAAGCTTGAGGATGTGCCTGAGGATGTAAAATCAAAC
AAGCGCTATTCAGGGTCCTCTAAATGGACTGTTCAGGAATGTGCTGAATCTGTCAAACAG
GATTTTGGCAGCATTGACATCCTAGTGCACTCACTTGCCAATGGACCAGAGGTGAGCAAG
CCTCTGTTGGAGACTTCAAGGAACGGGTATCTTGCGGCTTTATCTGCTTCGAGTTACTCT
TATGTTTCTCTACTCAAGCATTTCATTCCATTAATGAACCCAGGTGGTTCTTCACTTTCG
CTTACATACATTGCTTCCGAGAGGATCATTCCAGGATATGGTGGAGGAATGAGTTCTGCT
AAAGCTGCACTAGAGAGTGACACACGAGTGCTTGCTTTTGAAGCTGGGAGAAAACACAGA
ATCAGGGTCAACGCCATCTCGGCTGGTCCGCTGAGAAGTCGTGCTGCAAAAGCAATTGGA
TTCATTGATACAATGATTGAATATTCATTAGCCAATGCACCATTGCAGAAAGAATTATCT
GCAGATGAGGTGGGGAACACTGCTGCCTTCTTAGCATCACCTTTGGCCTCCGCCATCACC
GGTGCTGTAATCTATGTTGACAATGGTCTGAATGCAATGGGAGTCGGAGTCGACAGTCCA
ATATTTAAAGACCTTGACATTCCAACAGACAAGCACTAG

Peptide Sequence

PEP ID

orange1.1t02015.1
PEP Infomation
Sequence

MAATAACSLQMAAVKPCISSSHRGVKAGVAVVGGNSKGASWTKLSSASHISSGQPFLRSF
TSSSVKFDKVVTRAMAESSTNKPISGLPIDLKGKRAFIAGVADDNGYGWAIAKSLAAAGA
EILVGTWVPALNIFETSLRRGKFDESRVLPDGSLMEITKIYPLDAIYDKLEDVPEDVKSN
KRYSGSSKWTVQECAESVKQDFGSIDILVHSLANGPEVSKPLLETSRNGYLAALSASSYS
YVSLLKHFIPLMNPGGSSLSLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKHR
IRVNAISAGPLRSRAAKAIGFIDTMIEYSLANAPLQKELSADEVGNTAAFLASPLASAIT
GAVIYVDNGLNAMGVGVDSPIFKDLDIPTDKH*

Transcript Sequence

Transcript ID

orange1.1t02015.1
Transcript Infomation

gene=orange1.1t02015 CDS=315-1493
Sequence

AGTAGCTAAAACCCACAACTGCCTTTCAGTTTTCTCCATCTGTTTTGCACTTTTCGACAT
TTACGAAGCGTCCTCCATCAGTTTCTCTCCAAACAGGGACAGTCACGACACTACAAAGCC
TCGATCTCATCGAACTCAACTACTTTAAACTCTCGAAAGCTTCATCAGCTTTTGTTTTCT
TTCAGAGGAACCCCCCCAAAAGAGAAAGAAAAAAGCCATTTTTTTTAACTCAATACTTCT
CTCTTTTCCTCACATTGGCGCTTCCAATCGTTCAAAGGTATTTATTTTCCTCTGCAAGAG
TTGGTGCATTGAAAATGGCGGCAACAGCAGCTTGTAGCCTTCAAATGGCAGCAGTAAAGC
CATGCATTTCCTCTTCTCACAGAGGTGTCAAAGCAGGTGTTGCAGTTGTTGGTGGCAACT
CTAAGGGGGCATCGTGGACCAAGCTTTCTAGTGCTTCTCACATATCATCTGGGCAACCTT
TCCTGCGGAGTTTTACATCATCTTCAGTAAAATTTGATAAGGTTGTAACAAGGGCAATGG
CTGAATCTAGCACTAACAAGCCTATTTCCGGATTGCCTATTGATTTGAAAGGTAAGAGGG
CATTTATTGCTGGTGTAGCTGACGACAACGGATATGGTTGGGCTATAGCAAAATCTCTTG
CTGCTGCAGGAGCTGAAATTTTGGTTGGAACATGGGTTCCTGCTTTGAACATTTTTGAAA
CCAGTCTGCGACGTGGAAAATTTGATGAATCTCGTGTGTTGCCAGATGGTTCTTTGATGG
AAATCACTAAAATATATCCCCTAGATGCTATCTATGACAAGCTTGAGGATGTGCCTGAGG
ATGTAAAATCAAACAAGCGCTATTCAGGGTCCTCTAAATGGACTGTTCAGGAATGTGCTG
AATCTGTCAAACAGGATTTTGGCAGCATTGACATCCTAGTGCACTCACTTGCCAATGGAC
CAGAGGTGAGCAAGCCTCTGTTGGAGACTTCAAGGAACGGGTATCTTGCGGCTTTATCTG
CTTCGAGTTACTCTTATGTTTCTCTACTCAAGCATTTCATTCCATTAATGAACCCAGGTG
GTTCTTCACTTTCGCTTACATACATTGCTTCCGAGAGGATCATTCCAGGATATGGTGGAG
GAATGAGTTCTGCTAAAGCTGCACTAGAGAGTGACACACGAGTGCTTGCTTTTGAAGCTG
GGAGAAAACACAGAATCAGGGTCAACGCCATCTCGGCTGGTCCGCTGAGAAGTCGTGCTG
CAAAAGCAATTGGATTCATTGATACAATGATTGAATATTCATTAGCCAATGCACCATTGC
AGAAAGAATTATCTGCAGATGAGGTGGGGAACACTGCTGCCTTCTTAGCATCACCTTTGG
CCTCCGCCATCACCGGTGCTGTAATCTATGTTGACAATGGTCTGAATGCAATGGGAGTCG
GAGTCGACAGTCCAATATTTAAAGACCTTGACATTCCAACAGACAAGCACTAGAAGGGGG
TACCCGATTATCAGCACTACCCCACTCCATAGGACACCTAGGTCAGCGGCACCCCTTTTC
TTGTGAGAATTTCTGTATTACCTTTTCAGGGATTGAGCTTGAGTATAAACTTTTAGTCAA
GTCAACAACTTTAAATTGTGTTTTCAGTGTTAGTGCTTAGTTTGAACGTCTAAACTCAAG
GTTTCATTGTGCTTCAATTCAGTTGTAAGATTGCTTCCCAATCTAATAAAACATACCAAA
GGTAATCTGAATTCTGAGCCAGATGAGAATTTAAACTCAAAGATGGCAGGAACTATATCT
TTGCTCGCAGGTTTCAAAACTCAGATCTCAAATCAACTGAATTAATTGGTACTCGATAAT
GTGCTGGGATAAAGG