Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02012.2
CDS Infomation

gene=orange1.1t02012
Sequence

ATGAAGCCGGAGGCAGATCTGGAGAGCGACAGAAAAGCCATGCCGGAGATCGAAGCCGCC
GTCGACGGCGACGGCGACTCGAACCGATCCTTCAACGAGTCCAATTCCACTACCCAAAAG
GCCGAAACGACAAACAAGAAACAAAACGACGACGCGGAAGGGGAGGAAGAGAAAGAGCAG
AAAATGAAACCCGAACCGGATGTTGAAAATGATCCGGTCCAAAACAGAACCGAAAGTGGA
CCGGACCGGGAGGATCGAGACTGGTCATCCAACGGTAAATTAAATGAAAATGGAAATGGA
ACTGGAAATGTTAAAGAAGAAACCGACGAAGATAATGATAAAACTGCGTCGGAGGGGAAA
GTGGAAAGCGTTAAGAATAAAACGAGTGCAGTCGGTGGACTCAGTGAGTCGAACGAGTTG
TGGGACGAGTCGAAAAGGGAGGGAAAGCAGAGCAGCGATGTACAAAGCTCAGCTAGTTTG
TCGAGGAACAAACGTCGTCGTAGTGGCGAGGAGCCCTATGACGAGGAGGTTTCTCCCGCC
ACAAAAAAGGTATTGGCTGTAAAATCTGAGCCGTTAGTGAGGTTTCTTGGGATGATACGG
TCTCATCGGCTCAGCTCGCACTTTGAGCGGCGGCTTCGGAGCCAGGAATCTGAGAGGTAC
AAGAAGTTGGTAAGGCAGCACATTGATCTTCGAACAATTCAATCCAGGCTTGACAGAGGG
CTTTACTCCAATTGTTTCCAAAAATTCTTTAGAGATCTCCTTTTGTTATTCAACAACTTC
GTAATTTTCTTCAGAAAAAGCTCTCAGGAATATGCCGCAGCACAAGAACTCCGGACCCTA
GTCATTAAAGAAATGACCGATATGCTTCGTAAGCAACAACCCATTGCTGTTACTAAACCT
AAACCTAAACCCAAACCCGAACATCATCGACAACAACCACAGCCTCCGCCCGCTTCCCTT
TCAAAGCCTAACAGAGGTTCAACAATGGTGGTGTGTGGGAAACGCAGCTCTATTAAAGCA
ATATCCAAGAATGCGTATGGTAAAAAAGGAGATAGAAAGGATAGAGAAGTTGAAGAGAAA
CCGAAGGTGAACGAGAAGAAGGTTGATAGTTCGTTTGTGGGTATTGAGGATAAGGGTATT
AAGAAGAAGAGGAGCCAAGAGCGGTCTGTTTCGTTGCGGAGAAATTCAAGAAGTAGCAGT
AGGAGTGGTGACGTGAAGCATCAGTTTGGTGGTAATGAGCTTAGTTCTCATGATACTTTG
GAGGCTAAGACAGAGAATAAGAAAGAAAATGCTGTAAAGAAGAAGAAGCTAGGGGCGGCT
AGTTTCTTGAAAAGAATGAAGCAGAATTCACCTAGTGAAGTGATGGAAGATGACGACGAA
GAAGAAGATGAAAACGATAATGATAACGATGACGACGACTCGGGCGACGATAGCAAGGAT
AGTAAAGTAGAGGAGGAGAAGAAGAGGAGGTCGGTGACGAGGAGAGATGTAAATAGAGTT
ACAAGAAGTTCAAGGGGAAGAGGGGTGAGGGAAGAAAATAGAAGGAGAGGAGTGGGGAGG
CCGCCGAAGAGATCGGCTTCGGGGGCAATGAGTCCGCCGGAGAAGACGTCGGGGAAGAGG
GGCAGAGATAATGGTGAAAGCGAAGTTGGTGGTGGAGGCAGGAGTCGGAAAAGAACAAGG
AGGTGA

Peptide Sequence

PEP ID

orange1.1t02012.2
PEP Infomation
Sequence

MKPEADLESDRKAMPEIEAAVDGDGDSNRSFNESNSTTQKAETTNKKQNDDAEGEEEKEQ
KMKPEPDVENDPVQNRTESGPDREDRDWSSNGKLNENGNGTGNVKEETDEDNDKTASEGK
VESVKNKTSAVGGLSESNELWDESKREGKQSSDVQSSASLSRNKRRRSGEEPYDEEVSPA
TKKVLAVKSEPLVRFLGMIRSHRLSSHFERRLRSQESERYKKLVRQHIDLRTIQSRLDRG
LYSNCFQKFFRDLLLLFNNFVIFFRKSSQEYAAAQELRTLVIKEMTDMLRKQQPIAVTKP
KPKPKPEHHRQQPQPPPASLSKPNRGSTMVVCGKRSSIKAISKNAYGKKGDRKDREVEEK
PKVNEKKVDSSFVGIEDKGIKKKRSQERSVSLRRNSRSSSRSGDVKHQFGGNELSSHDTL
EAKTENKKENAVKKKKLGAASFLKRMKQNSPSEVMEDDDEEEDENDNDNDDDDSGDDSKD
SKVEEEKKRRSVTRRDVNRVTRSSRGRGVREENRRRGVGRPPKRSASGAMSPPEKTSGKR
GRDNGESEVGGGGRSRKRTRR*

Transcript Sequence

Transcript ID

orange1.1t02012.2
Transcript Infomation

gene=orange1.1t02012 CDS=824-2509
Sequence

AGCGAAATAAAAATCGAAAAGAGGCGAAACAGAGCCACGGCGCTCTCGAGTCTTGACTCT
CTTGCTCCCTCGTTCCCTATAAATATAAACATAAATCTCAAAAATTATAAAAAAAAAAAG
AAGAAGCATAAAACTGAAAACATAAACACAACAACAACGAACGGAATAAAAGCAAAAAGA
ACCCAATCAAAACGGCAAGGCCGAAACCCTAAAACGATAACTACGAAAACAAAACGAGAA
AATAAAACGTAGGCAGGGAAAAAAAAAAAGGAAGATAACAATCTAATGATTATAATGAAT
CGATGATGACATGAGCGTAGGCGTAGTAATATGAGTTATTAGCTTCTCTATTTCATGGCC
AGAGAACGCCACGGAACGACCTCGCAGCAGCAGCAACAGTGGGGCACGTTAGAGGAGTTG
TTGCTAGCGTGCGCCGTAAACCGCCACGGGACCAGGAGTTGGGACTCGATCGCTATGGAA
GTTCAGAACCGAAGTTCGGCTCTCTCGTCGCTCACTCCGCAGAGCTGTAGGGACAAGTTC
AATGAGATTAGACGGCGGTTCACGGTGAAAAACGGCGCCGAATCGACGAGTTTGGTCCCG
TTGGTTGACCAGCTCAGACAGATTCGTGTCCAAGAGCTCCGCGCCGAGGTTCAACGACGC
GACGTTTCGATCGTGTAAACTTGCTGTTTTTTTTTATTTGAGATCTGAGACTGAGGGATT
TTGCTTTATGTGATGAGATCTGTGAAACGACGGCGACGTTTTCGTGTTTTGCAGGTCATT
GGAATTGAAGGTGAAGAGATTGGAAGAGGAGAGGGAGAAGAGCATGAAGCCGGAGGCAGA
TCTGGAGAGCGACAGAAAAGCCATGCCGGAGATCGAAGCCGCCGTCGACGGCGACGGCGA
CTCGAACCGATCCTTCAACGAGTCCAATTCCACTACCCAAAAGGCCGAAACGACAAACAA
GAAACAAAACGACGACGCGGAAGGGGAGGAAGAGAAAGAGCAGAAAATGAAACCCGAACC
GGATGTTGAAAATGATCCGGTCCAAAACAGAACCGAAAGTGGACCGGACCGGGAGGATCG
AGACTGGTCATCCAACGGTAAATTAAATGAAAATGGAAATGGAACTGGAAATGTTAAAGA
AGAAACCGACGAAGATAATGATAAAACTGCGTCGGAGGGGAAAGTGGAAAGCGTTAAGAA
TAAAACGAGTGCAGTCGGTGGACTCAGTGAGTCGAACGAGTTGTGGGACGAGTCGAAAAG
GGAGGGAAAGCAGAGCAGCGATGTACAAAGCTCAGCTAGTTTGTCGAGGAACAAACGTCG
TCGTAGTGGCGAGGAGCCCTATGACGAGGAGGTTTCTCCCGCCACAAAAAAGGTATTGGC
TGTAAAATCTGAGCCGTTAGTGAGGTTTCTTGGGATGATACGGTCTCATCGGCTCAGCTC
GCACTTTGAGCGGCGGCTTCGGAGCCAGGAATCTGAGAGGTACAAGAAGTTGGTAAGGCA
GCACATTGATCTTCGAACAATTCAATCCAGGCTTGACAGAGGGCTTTACTCCAATTGTTT
CCAAAAATTCTTTAGAGATCTCCTTTTGTTATTCAACAACTTCGTAATTTTCTTCAGAAA
AAGCTCTCAGGAATATGCCGCAGCACAAGAACTCCGGACCCTAGTCATTAAAGAAATGAC
CGATATGCTTCGTAAGCAACAACCCATTGCTGTTACTAAACCTAAACCTAAACCCAAACC
CGAACATCATCGACAACAACCACAGCCTCCGCCCGCTTCCCTTTCAAAGCCTAACAGAGG
TTCAACAATGGTGGTGTGTGGGAAACGCAGCTCTATTAAAGCAATATCCAAGAATGCGTA
TGGTAAAAAAGGAGATAGAAAGGATAGAGAAGTTGAAGAGAAACCGAAGGTGAACGAGAA
GAAGGTTGATAGTTCGTTTGTGGGTATTGAGGATAAGGGTATTAAGAAGAAGAGGAGCCA
AGAGCGGTCTGTTTCGTTGCGGAGAAATTCAAGAAGTAGCAGTAGGAGTGGTGACGTGAA
GCATCAGTTTGGTGGTAATGAGCTTAGTTCTCATGATACTTTGGAGGCTAAGACAGAGAA
TAAGAAAGAAAATGCTGTAAAGAAGAAGAAGCTAGGGGCGGCTAGTTTCTTGAAAAGAAT
GAAGCAGAATTCACCTAGTGAAGTGATGGAAGATGACGACGAAGAAGAAGATGAAAACGA
TAATGATAACGATGACGACGACTCGGGCGACGATAGCAAGGATAGTAAAGTAGAGGAGGA
GAAGAAGAGGAGGTCGGTGACGAGGAGAGATGTAAATAGAGTTACAAGAAGTTCAAGGGG
AAGAGGGGTGAGGGAAGAAAATAGAAGGAGAGGAGTGGGGAGGCCGCCGAAGAGATCGGC
TTCGGGGGCAATGAGTCCGCCGGAGAAGACGTCGGGGAAGAGGGGCAGAGATAATGGTGA
AAGCGAAGTTGGTGGTGGAGGCAGGAGTCGGAAAAGAACAAGGAGGTGAAATCAAAGGGT
GCATGCATGAATGATTGTTGTATAATGTATATTATTGAGAGGTTTTTTGCTTTTTTTTTT
TTTTTGGGTTATGATTCCTTTTGATCAGTTTAGTGTTTTAGTTACTAAGAGATCAAGATA
GAAATGGTTCAATTAGAGAGAATGAAGT