Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02010.5
CDS Infomation

gene=orange1.1t02010
Sequence

ATGGACTTTGAGGTTTTCGACAGTAGTGGCACGGATGATGACCTTCCTCCTTCACATCAC
AATAGATTTCAGAGAGGGGTTCGCCCCACTGGGAATGGAAGATCTGCAGTTATAGGTTCC
GCTTCATTACCTAGGATGCAAAATGACATGGCAACTCAGATCCACAGCGTTGAGCAGGAT
GCATACAGTTCAGTCCTGCGGGCCTTTAAAGCTCAATCTGATGCCATTACTTGGGAGAAG
GAGAGTTTAATTACTGAACTTAGAAAGGAGTTGAGAGTATCGGACGAGGAACATAGGGAG
CTTCTATCAAAGGTTAATGCTGATGACATTATCCTGAGGATAAGGGAATGGAGAAAGGCA
AGTGGCCTCCAGCCTGGCATGCCCAGCATCCCTCAGCCGGTCCATGATCCTGCACCCAGT
CCTACCGTTTCTGCATCACGTAAGAAAACAAAAACATCGCAGTCAGTAGCTTCATTGTCA
ACTGGTGCGCCATCTCCTGGAATGCATCCATCTGTGCAACCATCTTCATCTGCCTTGAGA
CCAGGTCCACCACCTGGATCTAAGGGCAAGAAACCAAAATCATTTTCTACAGGTCTTGCT
GGGAGGGGCCAAGTTGCTAATCGGGGTTCTTCTGGCGCTTTTCCAGCAAATGGACCTTCT
GAGGCAGCAACTTATAATCCCTTAATTGGAAGGAAAGTTTGGACAAGGTGGCCTGAAGAC
AACCACTTCTATGAGGCTGTTATAACTGACTACAACCCCAATGAGGGGCGGCATGCTTTG
GTTTATGATATTAATACAGCTGATGAAACATGGGAGTGGGTCAATCTCAAAGAGATATCA
CCAGAAGATATTAAGTGGGAAGGTGATGAGCCTGGTATTTCTCGGAAAGGTGGCCGTCCA
GGACCCGGTCGTGGGACTAAGAAACCTTTGACGCGGGGTGGTGGTGTTTCTGGTGCAGGA
AGAGGTAGAGGGACCATGAAGCCCAAGAAAGGTTTTCCTTTCTCCCAGAATGGTATTGGC
AAGAAGCCTTTGGGTGATATTGAAATACTTCACACAGAAACTCTAATTAAGGAGGTTGAA
AAAGTTTTTGCTGCTAATCATCCTGATCCGACGGATGTCGAGAAAGCAAAGAGGGTACTT
AAAGAGCAAGAACTAGCCCTAGTCAATGCAATTGCAAAGCTTGAAGATGCATCTGACGGT
GAAAGTGGAACGAGGATGGCGAAAACGGCCATACAGTGA

Peptide Sequence

PEP ID

orange1.1t02010.5
PEP Infomation
Sequence

MDFEVFDSSGTDDDLPPSHHNRFQRGVRPTGNGRSAVIGSASLPRMQNDMATQIHSVEQD
AYSSVLRAFKAQSDAITWEKESLITELRKELRVSDEEHRELLSKVNADDIILRIREWRKA
SGLQPGMPSIPQPVHDPAPSPTVSASRKKTKTSQSVASLSTGAPSPGMHPSVQPSSSALR
PGPPPGSKGKKPKSFSTGLAGRGQVANRGSSGAFPANGPSEAATYNPLIGRKVWTRWPED
NHFYEAVITDYNPNEGRHALVYDINTADETWEWVNLKEISPEDIKWEGDEPGISRKGGRP
GPGRGTKKPLTRGGGVSGAGRGRGTMKPKKGFPFSQNGIGKKPLGDIEILHTETLIKEVE
KVFAANHPDPTDVEKAKRVLKEQELALVNAIAKLEDASDGESGTRMAKTAIQ*

Transcript Sequence

Transcript ID

orange1.1t02010.5
Transcript Infomation

gene=orange1.1t02010 CDS=296-1534
Sequence

CTTTCTCTCTCCTCGGCAACATTCCTTTGGCCTTTGCTCAATCAAAATCCCTAATTTTAT
CCCCAAATCAAACGAAATTGAATCGCAGGCCATAATTAGAATTTCTATCTAATTGATCCC
GATTTCACTTCTTTTGATCGATTCTGGCTTGAAATGTGAAAATTGCCGTGAAATTATCGG
CCTTTGGCGGTTAATGGTCCTCGAGCTTGAAATTTTTTTTCAGAGAAATCGGTCCACTTT
TGTCGTTTTTGAGCTGATTCGAAGTGTAATTTAAGGTTTTTTTGAAGAAACGGTGATGGA
CTTTGAGGTTTTCGACAGTAGTGGCACGGATGATGACCTTCCTCCTTCACATCACAATAG
ATTTCAGAGAGGGGTTCGCCCCACTGGGAATGGAAGATCTGCAGTTATAGGTTCCGCTTC
ATTACCTAGGATGCAAAATGACATGGCAACTCAGATCCACAGCGTTGAGCAGGATGCATA
CAGTTCAGTCCTGCGGGCCTTTAAAGCTCAATCTGATGCCATTACTTGGGAGAAGGAGAG
TTTAATTACTGAACTTAGAAAGGAGTTGAGAGTATCGGACGAGGAACATAGGGAGCTTCT
ATCAAAGGTTAATGCTGATGACATTATCCTGAGGATAAGGGAATGGAGAAAGGCAAGTGG
CCTCCAGCCTGGCATGCCCAGCATCCCTCAGCCGGTCCATGATCCTGCACCCAGTCCTAC
CGTTTCTGCATCACGTAAGAAAACAAAAACATCGCAGTCAGTAGCTTCATTGTCAACTGG
TGCGCCATCTCCTGGAATGCATCCATCTGTGCAACCATCTTCATCTGCCTTGAGACCAGG
TCCACCACCTGGATCTAAGGGCAAGAAACCAAAATCATTTTCTACAGGTCTTGCTGGGAG
GGGCCAAGTTGCTAATCGGGGTTCTTCTGGCGCTTTTCCAGCAAATGGACCTTCTGAGGC
AGCAACTTATAATCCCTTAATTGGAAGGAAAGTTTGGACAAGGTGGCCTGAAGACAACCA
CTTCTATGAGGCTGTTATAACTGACTACAACCCCAATGAGGGGCGGCATGCTTTGGTTTA
TGATATTAATACAGCTGATGAAACATGGGAGTGGGTCAATCTCAAAGAGATATCACCAGA
AGATATTAAGTGGGAAGGTGATGAGCCTGGTATTTCTCGGAAAGGTGGCCGTCCAGGACC
CGGTCGTGGGACTAAGAAACCTTTGACGCGGGGTGGTGGTGTTTCTGGTGCAGGAAGAGG
TAGAGGGACCATGAAGCCCAAGAAAGGTTTTCCTTTCTCCCAGAATGGTATTGGCAAGAA
GCCTTTGGGTGATATTGAAATACTTCACACAGAAACTCTAATTAAGGAGGTTGAAAAAGT
TTTTGCTGCTAATCATCCTGATCCGACGGATGTCGAGAAAGCAAAGAGGGTACTTAAAGA
GCAAGAACTAGCCCTAGTCAATGCAATTGCAAAGCTTGAAGATGCATCTGACGGTGAAAG
TGGAACGAGGATGGCGAAAACGGCCATACAGTGAGATGGGTGGAATGGTTGATGGTTCTG
CCGGCAACAACAGCGGGCAATAACGGCAGATAATCAATGCCGATGAGGCAATGATACCGT
CATTTGTAGATTGTTGTAACATGTTTTAAGCTCTATGACCAACTAGGCCAATGTACTTCA
GGCTAGTGGTGTACTTAATTTAAAGTGACTTAGGTTTGGTTTCGTACTGTCATTGTAAGC
TTATTTTTTCTCATTGCTCTTTAGATGCTTAATGTAAATTTTTTCTTTCCATGTAAAGAT
TATTTTCATATTGTTTGCTTCTCTCTTCTCTCTCAATC