Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02009.1
CDS Infomation

gene=orange1.1t02009
Sequence

ATGCTCCTCCTCCCTCATTTCTCAACTAAACCACACCTCCTCTTCTCTTCACTCTCTTCT
TCTTCTTCTTCTCTCCGCCCTCGCCTCCCCAAATTCCCGTTCTACCCCGCCTACTTTACA
AAGTCTCCATCCTGTCCTTCCATCGCATGCCACGTCAGCACGACAGGCGGCGGCGGTGCT
GCGCAGATGGAGTCGAGTGCGTCTGTCGATTCGGTGACGCATGATTTGAAGAATCAGAGA
TTGGATACGGAAACGGAAACGGACGGCGGAGATGAGAGCAAGATGACGAAGAAGCTGAAA
GCTCTTGAGGATCTGAATTGGGACCACTCGTTTGTTCGAGAGTTGCCTGGTGATCCCAGG
ACTGATTCTATCCCTCGTGAGGTATTGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCT
GAAGTAGAAAATCCTCAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTCTCTTGAGTTG
GATCCTAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTTTTTCTGGGGCTACTCCTTTG
GCGGGAGCGGTGCCATATGCTCAATGCTACGGTGGACATCAATTTGGCATGTGGGCTGGT
CAGCTGGGTGATGGTCGGGCAATAACTCTTGGCGAGATCCTGAATTTGAAGTCGGAAAGG
TGGGAATTGCAGCTTAAAGGAGCTGGGAAGACTCCATATAGCCGCTTTGCTGATGGCCTT
GCAGTACTGCGTAGTAGCATCAGGGAGTTCCTTTGCAGTGAAGCCATGCACTTTTTAGGA
ATCCCAACAACTCGTGCACTTTGTCTTGTGACAACAGGAAAATTTGTTACTCGAGACATG
TTTTACGATGGCAATCCAAAGGAAGAACCTGGTGCAATTGTTTGCAGAGTTGCTCAATCT
TTTTTGCGCTTTGGTTCATATCAAATACATGCTTCAAGAGGACAAGAGGACCTTGATATA
GTCCGTACTTTAGCTGACTATGCTATTAGACATCATTTTCGTCATATTGAGAATATGAAT
AAAAGCGAGAGCTTATCTTTTAGCACAGGCGATGAGGATCATTCCGTTGTTGACCTAACT
TCAAATAAGTATGCAGCATGGGCAGTGGAGGTTGCTGAGCGTACGGCTTCGTTGGTTGCA
CAGTGGCAAGGTGTTGGTTTCACCCATGGTGTGCTGAACACTGACAACATGAGCATTTTG
GGGCTCACTATTGATTATGGACCTTTTGGGTTTCTGGATGCATTCGATCCAAGTTTCACC
CCAAACACTACGGATCTTCCTGGAAGAAGATACTGTTTTGCAAACCAGCCTGATATTGGC
TTGTGGAACATTGCACAGTTTTCCACAACTCTAGCAGCAGCTAAATTGATAGATGATAAA
GAGGCAAATTATGTCATGGAAAGATATGGAACAAAGTTTATGGATGAATATCAAGCCATT
ATGACAAAGAAACTTGGTCTTCCAAAATACAATAAACAGATTATTAGTAAACTTCTAAAC
AATATGGCTGTTGACAAAGTTGATTACACAAATTTCTTTCGTGCACTTTCCAATGTCAAA
GCTGATCCCAGCATTCCAGAGGATGAGTTGTTAGTTCCACTGAAGGCTGTTTTGTTAGAT
ATCGGAAAGGAGCGGAAGGAGGCATGGATCAGCTGGGTGTTATCGTACATACAAGAGCTG
TTGTCTAGTGGCATCTCAGATGAGGAAAGGAAGGCATTGATGAATTCTGTGAACCCAAAA
TATGTTCTTAGAAACTACTTGTGCCAGAGTGCTATCGATGCAGCTGAGCTCGGAGATTTT
GGTGAGGTGCGGAGGTTGCTTAAACTTATGGAACGCCCATATGACGAGCAACCAGGAATG
GAAAAGTATGCTCGCCTGCCCCCGGCATGGGCTTATCGACCAGGTGTTTGCATGCTTTCC
TGTTCATCGTAA

Peptide Sequence

PEP ID

orange1.1t02009.1
PEP Infomation
Sequence

MLLLPHFSTKPHLLFSSLSSSSSSLRPRLPKFPFYPAYFTKSPSCPSIACHVSTTGGGGA
AQMESSASVDSVTHDLKNQRLDTETETDGGDESKMTKKLKALEDLNWDHSFVRELPGDPR
TDSIPREVLHACYTKVSPSAEVENPQLVAWSESVADSLELDPKEFERPDFPLFFSGATPL
AGAVPYAQCYGGHQFGMWAGQLGDGRAITLGEILNLKSERWELQLKGAGKTPYSRFADGL
AVLRSSIREFLCSEAMHFLGIPTTRALCLVTTGKFVTRDMFYDGNPKEEPGAIVCRVAQS
FLRFGSYQIHASRGQEDLDIVRTLADYAIRHHFRHIENMNKSESLSFSTGDEDHSVVDLT
SNKYAAWAVEVAERTASLVAQWQGVGFTHGVLNTDNMSILGLTIDYGPFGFLDAFDPSFT
PNTTDLPGRRYCFANQPDIGLWNIAQFSTTLAAAKLIDDKEANYVMERYGTKFMDEYQAI
MTKKLGLPKYNKQIISKLLNNMAVDKVDYTNFFRALSNVKADPSIPEDELLVPLKAVLLD
IGKERKEAWISWVLSYIQELLSSGISDEERKALMNSVNPKYVLRNYLCQSAIDAAELGDF
GEVRRLLKLMERPYDEQPGMEKYARLPPAWAYRPGVCMLSCSS*

Transcript Sequence

Transcript ID

orange1.1t02009.1
Transcript Infomation

gene=orange1.1t02009 CDS=180-2111
Sequence

AAATTCTTTCTACAGCTTTCCGTTCCCACACAACCCCCAAAAATATCTACCCAAAATAAT
AATAAAAATAATAATGAAAAAATAAAATCGCTTTTATCAAAATTAAAAACCCACGCATAA
AATTTATTAATAATTGTTTTTTTTTTTTAGTATCTGTTTAATAAACAACAAAACAAACAA
TGCTCCTCCTCCCTCATTTCTCAACTAAACCACACCTCCTCTTCTCTTCACTCTCTTCTT
CTTCTTCTTCTCTCCGCCCTCGCCTCCCCAAATTCCCGTTCTACCCCGCCTACTTTACAA
AGTCTCCATCCTGTCCTTCCATCGCATGCCACGTCAGCACGACAGGCGGCGGCGGTGCTG
CGCAGATGGAGTCGAGTGCGTCTGTCGATTCGGTGACGCATGATTTGAAGAATCAGAGAT
TGGATACGGAAACGGAAACGGACGGCGGAGATGAGAGCAAGATGACGAAGAAGCTGAAAG
CTCTTGAGGATCTGAATTGGGACCACTCGTTTGTTCGAGAGTTGCCTGGTGATCCCAGGA
CTGATTCTATCCCTCGTGAGGTATTGCATGCCTGTTATACTAAAGTTTCTCCGTCAGCTG
AAGTAGAAAATCCTCAGCTTGTTGCGTGGTCAGAATCAGTGGCCGATTCTCTTGAGTTGG
ATCCTAAAGAATTTGAAAGACCAGATTTTCCCCTCTTTTTTTCTGGGGCTACTCCTTTGG
CGGGAGCGGTGCCATATGCTCAATGCTACGGTGGACATCAATTTGGCATGTGGGCTGGTC
AGCTGGGTGATGGTCGGGCAATAACTCTTGGCGAGATCCTGAATTTGAAGTCGGAAAGGT
GGGAATTGCAGCTTAAAGGAGCTGGGAAGACTCCATATAGCCGCTTTGCTGATGGCCTTG
CAGTACTGCGTAGTAGCATCAGGGAGTTCCTTTGCAGTGAAGCCATGCACTTTTTAGGAA
TCCCAACAACTCGTGCACTTTGTCTTGTGACAACAGGAAAATTTGTTACTCGAGACATGT
TTTACGATGGCAATCCAAAGGAAGAACCTGGTGCAATTGTTTGCAGAGTTGCTCAATCTT
TTTTGCGCTTTGGTTCATATCAAATACATGCTTCAAGAGGACAAGAGGACCTTGATATAG
TCCGTACTTTAGCTGACTATGCTATTAGACATCATTTTCGTCATATTGAGAATATGAATA
AAAGCGAGAGCTTATCTTTTAGCACAGGCGATGAGGATCATTCCGTTGTTGACCTAACTT
CAAATAAGTATGCAGCATGGGCAGTGGAGGTTGCTGAGCGTACGGCTTCGTTGGTTGCAC
AGTGGCAAGGTGTTGGTTTCACCCATGGTGTGCTGAACACTGACAACATGAGCATTTTGG
GGCTCACTATTGATTATGGACCTTTTGGGTTTCTGGATGCATTCGATCCAAGTTTCACCC
CAAACACTACGGATCTTCCTGGAAGAAGATACTGTTTTGCAAACCAGCCTGATATTGGCT
TGTGGAACATTGCACAGTTTTCCACAACTCTAGCAGCAGCTAAATTGATAGATGATAAAG
AGGCAAATTATGTCATGGAAAGATATGGAACAAAGTTTATGGATGAATATCAAGCCATTA
TGACAAAGAAACTTGGTCTTCCAAAATACAATAAACAGATTATTAGTAAACTTCTAAACA
ATATGGCTGTTGACAAAGTTGATTACACAAATTTCTTTCGTGCACTTTCCAATGTCAAAG
CTGATCCCAGCATTCCAGAGGATGAGTTGTTAGTTCCACTGAAGGCTGTTTTGTTAGATA
TCGGAAAGGAGCGGAAGGAGGCATGGATCAGCTGGGTGTTATCGTACATACAAGAGCTGT
TGTCTAGTGGCATCTCAGATGAGGAAAGGAAGGCATTGATGAATTCTGTGAACCCAAAAT
ATGTTCTTAGAAACTACTTGTGCCAGAGTGCTATCGATGCAGCTGAGCTCGGAGATTTTG
GTGAGGTGCGGAGGTTGCTTAAACTTATGGAACGCCCATATGACGAGCAACCAGGAATGG
AAAAGTATGCTCGCCTGCCCCCGGCATGGGCTTATCGACCAGGTGTTTGCATGCTTTCCT
GTTCATCGTAATCTGCCATTCTCTGCATTATGTTATACCTATACCAGAAAGAGGATTGTA
ACTTCATGTATATAATAGTCGAATCATTATTATTATTATTATTTTTGTGGCTGCAGAAAA
AAGTAGAAATAATTTGTATGGCATTATTTCTTTGCAGAATTTTAACAGTTTATGCATTTC
GAAATCATTTTATTTATTACAATTTTTTATTTTATGACTTCTTGCAATTGGCTTCACAAG
GATTCGTACAAAATTGTAGGTTAAGAATATTTTATCTTATAGAAAGGCAGGAGTTTAGAA
ATGTTTAGATCTTCTATCACCTTTATTTCGCAACTTATGCAGTGTGTAAATTCCATTATA
GT