Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t02003.1
CDS Infomation

gene=orange1.1t02003
Sequence

ATGGCTCCTATTTACAGTTTTCCCATCCTCTTCCTATTCTGTTCTACTCTTATCTCTCCC
ACTCTTTCCACTACGAGAAAACTCAACGCTTTAGTTCAAGAACAACCGCTCGTCCTGAAA
TACCACAACGGCGCTCTTCTAAAAGGCAACGTCACCGTTAATCTCATCTGGTACGGCAAG
TTCACTCCCATCCAACGCTCGATAATAGTTGACTTCATCCACTCCCTAAATTTCAACAGG
GCCCCGCAGCCCTCCACGTCATCGTGGTGGAAAACAACTGAAAATTACAAAGGAGGTTCG
TCTAACCTCGTCGTACGGCATCAAGTCCTCTTGGAAAACTACTCCCTTGGCAAAGCACTG
AAGAAGGTTCATTTGCTTGCTTTGTCCAAGAAAGTAACGAACACTCTCCCTACGTCAATT
AACGTCGTTTTGACGGCGAAGGATGTGGCCGTAGACGGCTTCTGCATGAACAGGTGTGGG
ACCCACGGGTCTGCTCTGCCGGGTCGTGGGTTGGCCAGCCGTGGAACCTATATCTGGGTT
GGAAACTCCGAGACTCAGTGCCCTGGCTACTGTGCCTGGCCTTTCCACCAGCCCATTTAC
GGCCCTCAAACCCCGCCATTAGTCGCGCCTAACGGAGACGTCGGCGTTGATGGAATGATT
ATCAATTTAGCTACCCTTTTGGCCAACACCGTCACTAACCCGTTCAATAACGGGTATTTC
CAAGGCCCGCCAACGGCGCCGATTGAGGCGGCCACGGCATGTACGGGTGTGTTTGGGTCA
GGTTCTTATCCGGGATATCCGGGTCGGGTCTTGGTGGATAAGGTAAGTGGAGCGAGCTAC
AACGCTCACGGGATAAATGGGCGCAAGTACTTGGTGCCGGCGATGTGGGACCCCCAGACA
TCGGGATGTAAGACCACGGTTTGA

Peptide Sequence

PEP ID

orange1.1t02003.1
PEP Infomation
Sequence

MAPIYSFPILFLFCSTLISPTLSTTRKLNALVQEQPLVLKYHNGALLKGNVTVNLIWYGK
FTPIQRSIIVDFIHSLNFNRAPQPSTSSWWKTTENYKGGSSNLVVRHQVLLENYSLGKAL
KKVHLLALSKKVTNTLPTSINVVLTAKDVAVDGFCMNRCGTHGSALPGRGLASRGTYIWV
GNSETQCPGYCAWPFHQPIYGPQTPPLVAPNGDVGVDGMIINLATLLANTVTNPFNNGYF
QGPPTAPIEAATACTGVFGSGSYPGYPGRVLVDKVSGASYNAHGINGRKYLVPAMWDPQT
SGCKTTV*

Transcript Sequence

Transcript ID

orange1.1t02003.1
Transcript Infomation

gene=orange1.1t02003 CDS=161-1084
Sequence

ATTTCCACGTGTCACTCCTCAATGTTGACGCCTTCCCTCTTCTACAGCTGTCTTCCTATA
AACCCCTAGTATAAATACCATCTCAACCTCACGTTCTCTCTCGGCCTCTCCAGACGTTCC
TATTTCTGTCAGCCTCGTTATCAACTTCTTTGCCGGAGTCATGGCTCCTATTTACAGTTT
TCCCATCCTCTTCCTATTCTGTTCTACTCTTATCTCTCCCACTCTTTCCACTACGAGAAA
ACTCAACGCTTTAGTTCAAGAACAACCGCTCGTCCTGAAATACCACAACGGCGCTCTTCT
AAAAGGCAACGTCACCGTTAATCTCATCTGGTACGGCAAGTTCACTCCCATCCAACGCTC
GATAATAGTTGACTTCATCCACTCCCTAAATTTCAACAGGGCCCCGCAGCCCTCCACGTC
ATCGTGGTGGAAAACAACTGAAAATTACAAAGGAGGTTCGTCTAACCTCGTCGTACGGCA
TCAAGTCCTCTTGGAAAACTACTCCCTTGGCAAAGCACTGAAGAAGGTTCATTTGCTTGC
TTTGTCCAAGAAAGTAACGAACACTCTCCCTACGTCAATTAACGTCGTTTTGACGGCGAA
GGATGTGGCCGTAGACGGCTTCTGCATGAACAGGTGTGGGACCCACGGGTCTGCTCTGCC
GGGTCGTGGGTTGGCCAGCCGTGGAACCTATATCTGGGTTGGAAACTCCGAGACTCAGTG
CCCTGGCTACTGTGCCTGGCCTTTCCACCAGCCCATTTACGGCCCTCAAACCCCGCCATT
AGTCGCGCCTAACGGAGACGTCGGCGTTGATGGAATGATTATCAATTTAGCTACCCTTTT
GGCCAACACCGTCACTAACCCGTTCAATAACGGGTATTTCCAAGGCCCGCCAACGGCGCC
GATTGAGGCGGCCACGGCATGTACGGGTGTGTTTGGGTCAGGTTCTTATCCGGGATATCC
GGGTCGGGTCTTGGTGGATAAGGTAAGTGGAGCGAGCTACAACGCTCACGGGATAAATGG
GCGCAAGTACTTGGTGCCGGCGATGTGGGACCCCCAGACATCGGGATGTAAGACCACGGT
TTGATGGATGGGATGAAATGTTCACAAGCAACAAAATCTATGTGGAGCTATGGACGCATG
CGGCCACGGAACTGTATGTATGTAGATAGTTATGAATATGGTTTTGTCGTTTTGTGTGAC
GTGTAAATTAAGTTCCAAAAAAGAGGAAAATTACAAAAAAAAATGAAAAATATAGTTTAT
ATAAAGTAAAGTTGTGGGGAAACTGTTCTTCAGCGTGTTTGTTTATGGGTAATGATGAAA
ATAAAGGTTAATTTTTAGGGGTGCTGCTGGGGGGCCTGGTAAAACCAGAGACCATCATTG
CTTTGGATTGGAATAGAGAAATATTCGATGCATCTCACCACCATTACAAGAACTGTCAAC
GCCGATTTCAGAACCTTTTACTAATAAACTTAAAATTGTATGCAGAAGCATGAAGTCACA
CAGGGAGATTTGTCGCTGATGAAAAATAAATCAAAGTTTTATCTACATGCAGTACTTAAG
TTTCTACAAATATTTTTAATAATGATTTTAGTGCAAAGAAAATAAATTTGAAGAAAGAGG
TGGTTATCAATTTAATTAAGAGTTGGTATAAGTAATTTTTAAAATTTATTGGAAGTGTTA
AAATTTTTAATTTCAACAAAACCATAACGTAACA