Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01884.1
CDS Infomation

gene=orange1.1t01884
Sequence

ATGGCTTCTCCGCCAGACACAAGCAAAACCATTAAGCTAGAACGCTACAACAGTTACCTC
CGGAGGCTACATGTCACAAAAATGTTGCACTCTTCTTCAAAACTCTTTTTTCGTGCCACA
ATTCTGATTGCACTTGTTCTAATCCTTTTCTTCACACTCAATCACCCTCCACTTTCTGAC
AATACTGGTGAGAGTGGTGACAATAACAGTAATAATAAAAATAACCCACGTAATTTATTC
ACTCATCAGCACAGTCTTCTCTCCTCTTCGTTCTTCTCCTCTTCCTTTTCCACTGGCGGG
GCAGAGTGGGAGAAGCAGGTCCGCCACTCTGCCACCCCTCGCCGCCCCAACGGGATGACC
GTTTTGGTCACCGGAGCTGCCGGTTTCGTCGGATCTCACTGCTCCCTCGCTCTCAAAAAG
CGAGGCGATGGCGTTTTGGGGTTGGATAATTTCAACAGCTATTACGATCCGTCGCTTAAA
CGGGCGAGGCAAAAGCTGCTTCAAAAGCATCAAGTCTTCATCGTCGAAGGGGACCTGAAT
GACGCTCCCCTGTTAACAAAGCTTTTCGACGTTGTACCTTTCACCCACGTACTGCACTTA
GCAGCACAGGCCGGGGTTCGCTACGCCATGCAGAATCCGCAATCTTACGTGGCATCCAAC
ATCGCTGGATTCGTCAACCTGCTCGAAGTTTGCAAATCGGTGAACCCTCAGCCGTCGATC
GTGTGGGCCTCATCGAGCTCGGTGTACGGCCTCAACACCCAGGTCCCCTTCTCCGAGTCG
CACAGAACCGACCAGCCCGCGAGTTTGTACGCGGCGACTAAGAAAGCCGGGGAGGAAATC
GCCCACACTTACAACCATATTTACGGTCTTGCCCTCACGGGCCTAAGGTTCTTCACCGTG
TACGGCCCCTGGGGGAGACCCGACATGGCTTACTTCTTCTTCACCAAAGATATCTTACAG
GGCAAAACCATTGATGTGTACAAGACGCAAGATGACAGGGAGGTGGCGCGTGACTTCACA
TACATAGATGACGTAGTGAAGGGCTGTGTCGGGGCGTTGGACACGGCGGGGAAGAGCACG
GGGAGCGGGGGGAAGAAGCGGGGCCCCGCTCAGCTGAGAGTTTACAATCTCGGAAACACG
TCGCCAGTGCCCGTGGGGAGATTGGTGTCGATATTGGAGAATCTGTTGAACACTAAGGCC
AAAAAGCATGTGATAAGAATGCCGAGAAATGGGGACGTGCCGTATACGCATGCCAACGTG
AGCTTGGCTTACAAAGACTTCGGGTACAAGCCCACCACTGATCTGGCCGCCGGCCTGAGG
AAGTTCGTCAAATGGTACGTTAGTTATTATGGGATTCAACCGAGGGTAAAAAAGGAAAAT
GGTTTTAGTACTACTACTTCTACTATTCAGCATCCCGATGAGTCCGCTTGA

Peptide Sequence

PEP ID

orange1.1t01884.1
PEP Infomation
Sequence

MASPPDTSKTIKLERYNSYLRRLHVTKMLHSSSKLFFRATILIALVLILFFTLNHPPLSD
NTGESGDNNSNNKNNPRNLFTHQHSLLSSSFFSSSFSTGGAEWEKQVRHSATPRRPNGMT
VLVTGAAGFVGSHCSLALKKRGDGVLGLDNFNSYYDPSLKRARQKLLQKHQVFIVEGDLN
DAPLLTKLFDVVPFTHVLHLAAQAGVRYAMQNPQSYVASNIAGFVNLLEVCKSVNPQPSI
VWASSSSVYGLNTQVPFSESHRTDQPASLYAATKKAGEEIAHTYNHIYGLALTGLRFFTV
YGPWGRPDMAYFFFTKDILQGKTIDVYKTQDDREVARDFTYIDDVVKGCVGALDTAGKST
GSGGKKRGPAQLRVYNLGNTSPVPVGRLVSILENLLNTKAKKHVIRMPRNGDVPYTHANV
SLAYKDFGYKPTTDLAAGLRKFVKWYVSYYGIQPRVKKENGFSTTTSTIQHPDESA*

Transcript Sequence

Transcript ID

orange1.1t01884.1
Transcript Infomation

gene=orange1.1t01884 CDS=458-1888
Sequence

ATGTAATTCAGTAAATTGAATAATCATACATTTTTAAAAACTCAAATTTTGGAGCATTTA
GGATCCTGATAAAAATTTTCAGATATCCCAAATATTGACCAAATAGTAAATTGAGATAAA
ATTTTATCTCGAATTCATCCTAAATGGGTCGGGATCCCGAATCTTGATCAGAATTTGGGA
AATTTTACCAATCCTATTTGAGATTACAGTGATTCAACTTTATTGCAGATCATTTCTAAA
AGTAAGGAAGTCTCTGTAGTTATTTTGTTAAACTGCGAGGGGGCAATTGTTATTTTCCCT
TAAAAGTAGCAAAGGAAATGAGGAAAAGGAAAGTGGTCTCCAACCCATTTTGGTCCACCA
CACTCGTCTGTCACTTTATAATATAATCTTGTTAGCGAGAGGCTCTCTCACAAAAGTTTA
GAACAAAGCAATAAACCCAACAAACAAAATCCCAATAATGGCTTCTCCGCCAGACACAAG
CAAAACCATTAAGCTAGAACGCTACAACAGTTACCTCCGGAGGCTACATGTCACAAAAAT
GTTGCACTCTTCTTCAAAACTCTTTTTTCGTGCCACAATTCTGATTGCACTTGTTCTAAT
CCTTTTCTTCACACTCAATCACCCTCCACTTTCTGACAATACTGGTGAGAGTGGTGACAA
TAACAGTAATAATAAAAATAACCCACGTAATTTATTCACTCATCAGCACAGTCTTCTCTC
CTCTTCGTTCTTCTCCTCTTCCTTTTCCACTGGCGGGGCAGAGTGGGAGAAGCAGGTCCG
CCACTCTGCCACCCCTCGCCGCCCCAACGGGATGACCGTTTTGGTCACCGGAGCTGCCGG
TTTCGTCGGATCTCACTGCTCCCTCGCTCTCAAAAAGCGAGGCGATGGCGTTTTGGGGTT
GGATAATTTCAACAGCTATTACGATCCGTCGCTTAAACGGGCGAGGCAAAAGCTGCTTCA
AAAGCATCAAGTCTTCATCGTCGAAGGGGACCTGAATGACGCTCCCCTGTTAACAAAGCT
TTTCGACGTTGTACCTTTCACCCACGTACTGCACTTAGCAGCACAGGCCGGGGTTCGCTA
CGCCATGCAGAATCCGCAATCTTACGTGGCATCCAACATCGCTGGATTCGTCAACCTGCT
CGAAGTTTGCAAATCGGTGAACCCTCAGCCGTCGATCGTGTGGGCCTCATCGAGCTCGGT
GTACGGCCTCAACACCCAGGTCCCCTTCTCCGAGTCGCACAGAACCGACCAGCCCGCGAG
TTTGTACGCGGCGACTAAGAAAGCCGGGGAGGAAATCGCCCACACTTACAACCATATTTA
CGGTCTTGCCCTCACGGGCCTAAGGTTCTTCACCGTGTACGGCCCCTGGGGGAGACCCGA
CATGGCTTACTTCTTCTTCACCAAAGATATCTTACAGGGCAAAACCATTGATGTGTACAA
GACGCAAGATGACAGGGAGGTGGCGCGTGACTTCACATACATAGATGACGTAGTGAAGGG
CTGTGTCGGGGCGTTGGACACGGCGGGGAAGAGCACGGGGAGCGGGGGGAAGAAGCGGGG
CCCCGCTCAGCTGAGAGTTTACAATCTCGGAAACACGTCGCCAGTGCCCGTGGGGAGATT
GGTGTCGATATTGGAGAATCTGTTGAACACTAAGGCCAAAAAGCATGTGATAAGAATGCC
GAGAAATGGGGACGTGCCGTATACGCATGCCAACGTGAGCTTGGCTTACAAAGACTTCGG
GTACAAGCCCACCACTGATCTGGCCGCCGGCCTGAGGAAGTTCGTCAAATGGTACGTTAG
TTATTATGGGATTCAACCGAGGGTAAAAAAGGAAAATGGTTTTAGTACTACTACTTCTAC
TATTCAGCATCCCGATGAGTCCGCTTGATAATCAATCATATGGCTGTTTTTTTTTTTTCT
AAATTTTTTGGGTGAATTAAATTATATTGTTGTGGTGATCAATCGTTGCAAGCTGTTGAT
GGTGTGTAGCATAATAGATGTAGACTAAATTTTTTGGGTGAATTAAATTATATTGGCTGT
TTTTTTTTTTTCTAAATTTTTTGGGTGAATTAAATTATATTGTTGTGGTGATCAATCGTT
GCAAGCTGTTGATGGTGTGTAGCATAATAGATGTAGATTTTATGATGCTGATGATATATA
CATACAACAGATAACTGTGTATTAAATCTGTGAAATCAAGTGTAATAATGTGGTGTGGGG
TCTGCTAGAATGGGTGCAGATCTTAGCCGTTGGATTTATATTTAGAAAAAAAGAATTTGT
ATGAACAACAGTCATTAATTACATCAAGAATCAAGATTCTTCTTTGCCTTTATTTTATAT
ATATATATATATATATAAAATTTATTTTTGCATTTGCTTAGCTTGCTAGTTTGCTTACTG
CCTTTTGGTTTATTAGTTGTTAGTTCAATATTGATTGATTGAGCTCTTTTCTTTTGGAGT
ACAAGTGGGTGAGATGTTGAATATATTTAGCTTTTGAAGATGCTGTTCTCATGAATGAAG
AAGATTGAAGCAAGGATATGGATAGGGATATTTCCATACAATTATTTGGAACTTAACCC