Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01791.2
CDS Infomation

gene=orange1.1t01791
Sequence

ATGAGTTGGTTAAACGACGTAGGTAAGCTCATCAACGGCCTCTCTCTTGTGGCCAAAGAA
ATCACCAAACGCTCACAAGCACTCCAGACCGCAAGAACGGGAGATGTTGAAACCCTAATT
TCTTCATCTCTCAAGAAAGCCTTGGTTTCGGCCACCGAAATATCGGGTCTCACAAGAGGG
ACGGTTCGCGAGTTCACAAACCCTAAGCCGAAAGAATCCATCGTTTATTTTAACGATTCG
TCTGACGTGGCACAGTCCGCACCATCTACTGATAAAGATGGCGCCGTTGATCAATTTGCA
GCGTCGGTTAGAGATGTTTCAAATGACGGGGGGAAATTGGATGGGGAAAATGAAGCGAAG
GTTCTTGAATCTTCTGTAGAGAAAGAAAGTTTGGTGAAAGAATTTGAGTCCATTGATTTG
GGTGATAGGGTTGATGTGGACATAGAAAGAGAAGCGACCGCGAAGAGGCGGCGGCCGAGA
GAAAGAAAAGTTCCTTCCACGCCCTTTTCTAGATTACTCGGGTTTGCTGGTTTAGGAGCT
GGTCTTGCTTGGGGAACAGTCCAGGAATCTACCAAGAGAATCATGTATGGTACACCAAGC
TCTCAAGACAAGCAAGCTGCAATTTCCCCATTCTTATCTGATCAAAATGCAGAACGTTTA
GCTTATGCACTATGTAGAATGCGTGGAGCAGCACTCAAGATTGGGCAGATGTTGAGCATA
CAGGATGAATCTCTTGTCCCTGCCCCGATCTTGGCTGCTCTGGATATCGTCCGTCAAGGT
GCAGACGTAATGCCAAGGTGGCAGCTTAATCAAGTTTTGGATGCTGAATTAGGTTCTGAT
TGGCAATCAAAGTTGACTAGTTTTGATTATGAACCAATGGCTGCTGCAAGTATAGGCCAG
GTCCATCGAGCTGTCACAAAGGATGGTATGCAGGTTGCAATGAAAATTCAGTATCCTGGT
GTTGCAGATAGTATTGAAAGTGACATTCAGAATGTAAAAATTTTGTTAGATTATACAAAT
CTAATTCCAAAAGGGCTTTATCTTGACAGCGCAATGAAGGTGGCAAGAGAAGAATTATCA
CGTGAATGTGACTATGAAATGGAGGCAGCCAATCAGAAACGCTTCAGAGATGTGCTATCA
AATGCAAAAGGGTTTTATGTCCCATATGTTGTGGATGATACTTCTAGCAAAAGAGTTCTA
ACTACAGAACTTGTTTCCGGCATACCAATTGATAAGGTGGCACAACTAAGCCAGGAAACT
CGAAATTATGTTGGGAAAAAGTTGCTGGAACTCACTTTAATGGAGCTTTTTGTCTTCCGG
TTCATGCAGACTGATCCCAATTGGAGTAACTTCTTATATGATGAGGCTACAAAAACAATC
AATCTCATCGACTTTGGAGCAGCTCGGGCATACCCTAAAAGCTTCGTTGATGAGTATTTG
AGAATGGTATATTCTGCTTCCCATGCACTTGCGAGTAACTAA

Peptide Sequence

PEP ID

orange1.1t01791.2
PEP Infomation
Sequence

MSWLNDVGKLINGLSLVAKEITKRSQALQTARTGDVETLISSSLKKALVSATEISGLTRG
TVREFTNPKPKESIVYFNDSSDVAQSAPSTDKDGAVDQFAASVRDVSNDGGKLDGENEAK
VLESSVEKESLVKEFESIDLGDRVDVDIEREATAKRRRPRERKVPSTPFSRLLGFAGLGA
GLAWGTVQESTKRIMYGTPSSQDKQAAISPFLSDQNAERLAYALCRMRGAALKIGQMLSI
QDESLVPAPILAALDIVRQGADVMPRWQLNQVLDAELGSDWQSKLTSFDYEPMAAASIGQ
VHRAVTKDGMQVAMKIQYPGVADSIESDIQNVKILLDYTNLIPKGLYLDSAMKVAREELS
RECDYEMEAANQKRFRDVLSNAKGFYVPYVVDDTSSKRVLTTELVSGIPIDKVAQLSQET
RNYVGKKLLELTLMELFVFRFMQTDPNWSNFLYDEATKTINLIDFGAARAYPKSFVDEYL
RMVYSASHALASN*

Transcript Sequence

Transcript ID

orange1.1t01791.2
Transcript Infomation

gene=orange1.1t01791 CDS=360-1841
Sequence

AACCGACCCAAGCATACGGTATCACCCTTCATATACCCTCTTAGAGCCCCATCTTTTTTG
CAGTGAAACTGTATGCTCAGGTCTGCTACACACCCTTACCCTGAAAGAAAGGGGTGCATT
TAGCACTGCTCTTTCCTGGAAAGAATAATTTACTGTTGTCCAAGCTTCCTGCTTCTCGTT
CGGACACAACGCTTCACAGTTGGCCACTAAATTTTTGTGTTAGAATTTTAAAATGATTCA
CTTTCCGACATACACGTATCACATATAACACAAAACAAAAATGCAATTGCAAGAATCAGA
AATTAAAATCAAAATTAGGAACCAAATTTGAATTTCGCAGCCAATTTGCGCGCGCATGAA
TGAGTTGGTTAAACGACGTAGGTAAGCTCATCAACGGCCTCTCTCTTGTGGCCAAAGAAA
TCACCAAACGCTCACAAGCACTCCAGACCGCAAGAACGGGAGATGTTGAAACCCTAATTT
CTTCATCTCTCAAGAAAGCCTTGGTTTCGGCCACCGAAATATCGGGTCTCACAAGAGGGA
CGGTTCGCGAGTTCACAAACCCTAAGCCGAAAGAATCCATCGTTTATTTTAACGATTCGT
CTGACGTGGCACAGTCCGCACCATCTACTGATAAAGATGGCGCCGTTGATCAATTTGCAG
CGTCGGTTAGAGATGTTTCAAATGACGGGGGGAAATTGGATGGGGAAAATGAAGCGAAGG
TTCTTGAATCTTCTGTAGAGAAAGAAAGTTTGGTGAAAGAATTTGAGTCCATTGATTTGG
GTGATAGGGTTGATGTGGACATAGAAAGAGAAGCGACCGCGAAGAGGCGGCGGCCGAGAG
AAAGAAAAGTTCCTTCCACGCCCTTTTCTAGATTACTCGGGTTTGCTGGTTTAGGAGCTG
GTCTTGCTTGGGGAACAGTCCAGGAATCTACCAAGAGAATCATGTATGGTACACCAAGCT
CTCAAGACAAGCAAGCTGCAATTTCCCCATTCTTATCTGATCAAAATGCAGAACGTTTAG
CTTATGCACTATGTAGAATGCGTGGAGCAGCACTCAAGATTGGGCAGATGTTGAGCATAC
AGGATGAATCTCTTGTCCCTGCCCCGATCTTGGCTGCTCTGGATATCGTCCGTCAAGGTG
CAGACGTAATGCCAAGGTGGCAGCTTAATCAAGTTTTGGATGCTGAATTAGGTTCTGATT
GGCAATCAAAGTTGACTAGTTTTGATTATGAACCAATGGCTGCTGCAAGTATAGGCCAGG
TCCATCGAGCTGTCACAAAGGATGGTATGCAGGTTGCAATGAAAATTCAGTATCCTGGTG
TTGCAGATAGTATTGAAAGTGACATTCAGAATGTAAAAATTTTGTTAGATTATACAAATC
TAATTCCAAAAGGGCTTTATCTTGACAGCGCAATGAAGGTGGCAAGAGAAGAATTATCAC
GTGAATGTGACTATGAAATGGAGGCAGCCAATCAGAAACGCTTCAGAGATGTGCTATCAA
ATGCAAAAGGGTTTTATGTCCCATATGTTGTGGATGATACTTCTAGCAAAAGAGTTCTAA
CTACAGAACTTGTTTCCGGCATACCAATTGATAAGGTGGCACAACTAAGCCAGGAAACTC
GAAATTATGTTGGGAAAAAGTTGCTGGAACTCACTTTAATGGAGCTTTTTGTCTTCCGGT
TCATGCAGACTGATCCCAATTGGAGTAACTTCTTATATGATGAGGCTACAAAAACAATCA
ATCTCATCGACTTTGGAGCAGCTCGGGCATACCCTAAAAGCTTCGTTGATGAGTATTTGA
GAATGGTATATTCTGCTTCCCATGCACTTGCGAGTAACTAAGGTTCATGTTAAGTTACTC
TAACCTAGGCTTGTGTTATCAACTAATAGGATGTTGACACGAGTT