Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01787.1
CDS Infomation

gene=orange1.1t01787
Sequence

ATGGGGAGGCACTCTTGTTGTTACAAGCAGAAGCTAAGGAAAGGTTTGTGGTCACCTGAA
GAAGATGAGAAGCTTTTGAGGCATATTACTAAGTATGGCCATGGTTGCTGGAGCTCTGTC
CCCAAGCAAGCTGGTTTACAGAGATGTGGTAAGAGTTGCAGACTTAGATGGATTAATTAT
TTGAGGCCTGATTTGAAGAGAGGCACATTCTCACAGCAAGAAGAGAACCTTATAATTGAG
CTTCATGCAGTTCTGGGGAATAGATGGTCTCAGATTGCGGCACAACTGCCCGGTAGAACC
GACAATGAAATAAAGAATCTGTGGAATTCTTGCTTAAAGAAGAAGCTCAGGCAGAGAGGC
ATTGACCCTGTAACGCATAAGCCACTTTCTGAAGTTGAAAATGGAGAAGACAAGAATCAA
ACAACAAACAGCCAAGACAAAGTCTCTGGGGTATCTGGTGAATTGAACCTCCTCAACACT
GAGCTTACCGCAAAGCATGGGACAACGGCAGCTTTAAATGAGCAGAAACCAACTTCAGTT
ACTGCACAAGCCTACCATTTGTCGGAAATACAAGGCTCTTCAATCCCCAGCACAGTCAAC
AACAATAGAAGCAATTTTTATACACACAGATTTGCAAGTTCCAACCAAGAAAGCAGCAGC
ATCACCAATAGCCAGCCTTCAGATTTTGTGGGGCATTTTCCTCTTCAACAATTGAATTGT
GCTTCCAATGCAAGACTTTCAACAGCAGCCTCAAATTCCCCTCTCTGGTTTATGCAAACC
AGTAAATCATTCGATATAAATTCTCAATTCTCGTCCAATGCAATGCCCACAATCCTGCCC
CCTGTATCTAGCTCATCATTATTTTCAGCTCCTATGAGCTACAAAACATCTGTCACTCTT
CCCTCAGATAATCATTCGATACCCTCTTTTACGGTCAATGGATCCCGGTACTGGGAAGCC
GGTGGTGCCTCAAACAGCAACAGTGTAAGCAGTAGCAGCACAGAGCTGCAGAGCACCAGC
TCCTTCCTTGAGAGCAGCATCTTCCCTTGGGGACTAGCAGATTGCAGCTCATCAGAGAAA
GAAGGTCAAATCAATCTTATTGATAGCCACCCTGACGATGTTAAGTGGCCAGAATATTTC
CAAACCCCATCATTGCTAATGGCCGCTGCTTTGCAAAATCAAACTTCTCAATCCTTATAC
AATGAGATAAAATCTGAAACACATATCCTGACTGATAGCTCGAGTGGTATATGGCCTCAA
AACCAGCAACAACCTTTACAAAATTCTGACATATGTGCTAAGGAGATCCAGAGACTTACT
GCAACGTATGGACATATTTAG

Peptide Sequence

PEP ID

orange1.1t01787.1
PEP Infomation
Sequence

MGRHSCCYKQKLRKGLWSPEEDEKLLRHITKYGHGCWSSVPKQAGLQRCGKSCRLRWINY
LRPDLKRGTFSQQEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLRQRG
IDPVTHKPLSEVENGEDKNQTTNSQDKVSGVSGELNLLNTELTAKHGTTAALNEQKPTSV
TAQAYHLSEIQGSSIPSTVNNNRSNFYTHRFASSNQESSSITNSQPSDFVGHFPLQQLNC
ASNARLSTAASNSPLWFMQTSKSFDINSQFSSNAMPTILPPVSSSSLFSAPMSYKTSVTL
PSDNHSIPSFTVNGSRYWEAGGASNSNSVSSSSTELQSTSSFLESSIFPWGLADCSSSEK
EGQINLIDSHPDDVKWPEYFQTPSLLMAAALQNQTSQSLYNEIKSETHILTDSSSGIWPQ
NQQQPLQNSDICAKEIQRLTATYGHI*

Transcript Sequence

Transcript ID

orange1.1t01787.1
Transcript Infomation

gene=orange1.1t01787 CDS=349-1689
Sequence

GAAAAAAATATTAAAGAGAGAGAGAAAAAAAAATGAAACTATAGCAGGTTATGTTATGAA
TAGGACTTTTCTCTCGTGAAAGATCCCTCTTATAATAAATTCAACTTCTCTTTCTGAGCT
GTTACTTCATTTTCTGATCTTCCCAATCAAAATTGTTTCTCTTTCTTCACTTACATATTT
TCTACCACCAAAACATCTTCTAGCAAAGCAAATCCATTCACAGTCGCAACAGCAGCAAGC
TCATTGCTGACAGTTAACCACAGAAATTAAACTTGCTGTTTTTGGAAATTAAACTTGCTT
TTCTCCCCTTCATTTGAAGTCGAAGTGTTGAGTCTCCTTTTTCCTCAAATGGGGAGGCAC
TCTTGTTGTTACAAGCAGAAGCTAAGGAAAGGTTTGTGGTCACCTGAAGAAGATGAGAAG
CTTTTGAGGCATATTACTAAGTATGGCCATGGTTGCTGGAGCTCTGTCCCCAAGCAAGCT
GGTTTACAGAGATGTGGTAAGAGTTGCAGACTTAGATGGATTAATTATTTGAGGCCTGAT
TTGAAGAGAGGCACATTCTCACAGCAAGAAGAGAACCTTATAATTGAGCTTCATGCAGTT
CTGGGGAATAGATGGTCTCAGATTGCGGCACAACTGCCCGGTAGAACCGACAATGAAATA
AAGAATCTGTGGAATTCTTGCTTAAAGAAGAAGCTCAGGCAGAGAGGCATTGACCCTGTA
ACGCATAAGCCACTTTCTGAAGTTGAAAATGGAGAAGACAAGAATCAAACAACAAACAGC
CAAGACAAAGTCTCTGGGGTATCTGGTGAATTGAACCTCCTCAACACTGAGCTTACCGCA
AAGCATGGGACAACGGCAGCTTTAAATGAGCAGAAACCAACTTCAGTTACTGCACAAGCC
TACCATTTGTCGGAAATACAAGGCTCTTCAATCCCCAGCACAGTCAACAACAATAGAAGC
AATTTTTATACACACAGATTTGCAAGTTCCAACCAAGAAAGCAGCAGCATCACCAATAGC
CAGCCTTCAGATTTTGTGGGGCATTTTCCTCTTCAACAATTGAATTGTGCTTCCAATGCA
AGACTTTCAACAGCAGCCTCAAATTCCCCTCTCTGGTTTATGCAAACCAGTAAATCATTC
GATATAAATTCTCAATTCTCGTCCAATGCAATGCCCACAATCCTGCCCCCTGTATCTAGC
TCATCATTATTTTCAGCTCCTATGAGCTACAAAACATCTGTCACTCTTCCCTCAGATAAT
CATTCGATACCCTCTTTTACGGTCAATGGATCCCGGTACTGGGAAGCCGGTGGTGCCTCA
AACAGCAACAGTGTAAGCAGTAGCAGCACAGAGCTGCAGAGCACCAGCTCCTTCCTTGAG
AGCAGCATCTTCCCTTGGGGACTAGCAGATTGCAGCTCATCAGAGAAAGAAGGTCAAATC
AATCTTATTGATAGCCACCCTGACGATGTTAAGTGGCCAGAATATTTCCAAACCCCATCA
TTGCTAATGGCCGCTGCTTTGCAAAATCAAACTTCTCAATCCTTATACAATGAGATAAAA
TCTGAAACACATATCCTGACTGATAGCTCGAGTGGTATATGGCCTCAAAACCAGCAACAA
CCTTTACAAAATTCTGACATATGTGCTAAGGAGATCCAGAGACTTACTGCAACGTATGGA
CATATTTAGCCCGCATTCGTGAAACAGAAGGGGCTTGAAACAATTGCCGTTTCCCAGTTC
TCTCATATATCAGGTGTGTGTGATAAAGATTTTTCTCTTGTATATAGGTCTGATACAAAC
ATTTCTTACTCTCTGGTTTAGCAAATTTGTGGGGGGCAACAAGAACAAACTGAAAAAAAA
AAAATGTTATTAGCTTTAATTTTCTTTGTGTGAGTGTGTTAGTAGAGTTGCAGATTAAGG
CTTGTTTCCGTGTCTTTTATTCTACTTTGCCTCATTGCATCTGCATTGTGTTGTTGCAAT
TCTCTATCGGTAAAGAATCAAGAGAAGGTATTTGTTATATTCATTCATGTTTTCTTTTAT
TTTATTTTATTTTCCTTCCCTCTTCGATATGTTTATGGGAATCACATGAAGCTTCTTTAA
TGAAAGCAGAAAATTTCCAGTTT