Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01784.2
CDS Infomation

gene=orange1.1t01784
Sequence

ATGGCCAGATCAGCAGCAACTCCAGAAATTTTGCTCAAAGATCATGTTATTCTAATGGAA
GTTTTGAAGGATAAAGCAGATGAAGTTATCAAACTTTTATCGGAAAGCCATTGGACTTCT
TCATGCATTATTACAATGAAGAAGTTCCAGGACAAGTGTGGAGGACAAGATGAAGCATCT
GCAGTTTTGAGTTTCTTGACTGGACGAGGGAAAGCACTGTATCTATCAATCAGCAAGAAT
GAGTTTACAGAGGGTGTAAAAGTGTCCCTTTCTCCAGCTGCTGTTTCCAGCATCTCAAGT
TTAGATTATGATGTTTTGCACTTGATTTGGACTGTGGAAAAGCTTCAGCTACAGCTTGAC
ATCATTGATAGGCACTATGAAATGTCAAGAAAATCAGCATTAGCTTCCTTGCATTCTGGA
AACAAGACAGTGGCCCTGAGACATGCAAAGCAATTAAAGCTGACCAAAGAGAGTCGAGAA
AAGTGTACATCGCTTTTGAACAGAGTGGAGGAAGTATTGAGTCTGATAGAAAATGCTGAA
TCAACCAAAAAAGTCTCTGAAGCAATCCAAATAGGAGCTCAAGCAATCAAGAAAAATAAG
ATCAGTGTGGAGGAACTTCAACTCTGTTTAGAAGAACTTGAGGAGAGCATTGATTTGCAA
AAGCAGGCTGAAAAAGTCATAGTGCCATCATACACAGGAATTGATGACGAAGACATAGAA
GAGGAGTTCAAGAAATTGGAGCAGGAAGTTGAGTGCGAAAGACCTAAACCTACAGTATCC
AAAACTGGAGTCAATGAACCAGCAGCTTCAGAATCTGCTGAGTCGTTGCGTGTTGCATTC
TCAACTATTGGCCTTAACGATGGTCAAGCTACAGCCTTAGCAATTAGTGATACTGTGGTA
CCAGACAGAAGCAATGAATCCAAACACCCCATGCTTGAATCTGCATAG

Peptide Sequence

PEP ID

orange1.1t01784.2
PEP Infomation
Sequence

MARSAATPEILLKDHVILMEVLKDKADEVIKLLSESHWTSSCIITMKKFQDKCGGQDEAS
AVLSFLTGRGKALYLSISKNEFTEGVKVSLSPAAVSSISSLDYDVLHLIWTVEKLQLQLD
IIDRHYEMSRKSALASLHSGNKTVALRHAKQLKLTKESREKCTSLLNRVEEVLSLIENAE
STKKVSEAIQIGAQAIKKNKISVEELQLCLEELEESIDLQKQAEKVIVPSYTGIDDEDIE
EEFKKLEQEVECERPKPTVSKTGVNEPAASESAESLRVAFSTIGLNDGQATALAISDTVV
PDRSNESKHPMLESA*

Transcript Sequence

Transcript ID

orange1.1t01784.2
Transcript Infomation

gene=orange1.1t01784 CDS=668-1615
Sequence

TTTACATACTAATATCAATTTATACAGCATCGATTTTTATTTTTTCTATAAGAAACGAAA
CAGTGTCGTTTTGGCCGATGAAAAGTGTCTCCGAGGGTGCAGCCCTGTAGGTGGAGAGCA
ACGAAACGACGTCGATTCCTTTTAGCTTCGCTTCGCTGTGCGGGGTTGAGTAAGGATCCG
GTCCAGAATCTAGACCCTTCTGTCATCGCGTGGGAATTCATAACATTCAAATTCAACCCA
TCAACAATTAAAAAAAAAAAAAAAGCCTATCGAGATTCGAGAGCGAACCGAATTTTCGTA
AATTCAAACTGATTTTGCCCTAGAATTCTAAAAAGATGAGTTCAACCTCTGTGCGCGAAT
TCGTATTAAAGGAAGTACCTGATTGGAACGACGAAGTAATCGCCACGGCCCGATTCAAAG
CTTTTAGTGGACAAAGATCCGATTGGGAGCCCAAATTCCAATTTTGGAAAAATTTGATCC
TCAAAATTGCGCGCCATTTTAGCCTTGCCATCATTCACCCTTCTCAGGTAAAGAACGAGT
GGTTTAATAGAGGAGGATTGACACCTCTGTGTTTTGACGATGTTCTGGTGATGTTGTGCG
AAGTGTGGATCTAGTGGATGCAGCTAGTGGCCGGCTCACCCAGTTGTTTAGAAAAGTAAG
AAGTTTAATGGCCAGATCAGCAGCAACTCCAGAAATTTTGCTCAAAGATCATGTTATTCT
AATGGAAGTTTTGAAGGATAAAGCAGATGAAGTTATCAAACTTTTATCGGAAAGCCATTG
GACTTCTTCATGCATTATTACAATGAAGAAGTTCCAGGACAAGTGTGGAGGACAAGATGA
AGCATCTGCAGTTTTGAGTTTCTTGACTGGACGAGGGAAAGCACTGTATCTATCAATCAG
CAAGAATGAGTTTACAGAGGGTGTAAAAGTGTCCCTTTCTCCAGCTGCTGTTTCCAGCAT
CTCAAGTTTAGATTATGATGTTTTGCACTTGATTTGGACTGTGGAAAAGCTTCAGCTACA
GCTTGACATCATTGATAGGCACTATGAAATGTCAAGAAAATCAGCATTAGCTTCCTTGCA
TTCTGGAAACAAGACAGTGGCCCTGAGACATGCAAAGCAATTAAAGCTGACCAAAGAGAG
TCGAGAAAAGTGTACATCGCTTTTGAACAGAGTGGAGGAAGTATTGAGTCTGATAGAAAA
TGCTGAATCAACCAAAAAAGTCTCTGAAGCAATCCAAATAGGAGCTCAAGCAATCAAGAA
AAATAAGATCAGTGTGGAGGAACTTCAACTCTGTTTAGAAGAACTTGAGGAGAGCATTGA
TTTGCAAAAGCAGGCTGAAAAAGTCATAGTGCCATCATACACAGGAATTGATGACGAAGA
CATAGAAGAGGAGTTCAAGAAATTGGAGCAGGAAGTTGAGTGCGAAAGACCTAAACCTAC
AGTATCCAAAACTGGAGTCAATGAACCAGCAGCTTCAGAATCTGCTGAGTCGTTGCGTGT
TGCATTCTCAACTATTGGCCTTAACGATGGTCAAGCTACAGCCTTAGCAATTAGTGATAC
TGTGGTACCAGACAGAAGCAATGAATCCAAACACCCCATGCTTGAATCTGCATAGTTTTT
TCTTGTCTAGAAGGAGGGGGGAAAAAGGTTCATAGTTAAGAGTATTCCTCGTTTGGCTTA
CGCTACAGTGATTCTATTTGCTTACTATATGTGGTGTAGTGACTGTAGTCCTCAATGTGA
TTCAGTTGATTTCTTTATGTAATTTTTGCGTGTAACATTCTCAGTATAATTTTATTTTGA
AAATGCGTATAGGCTGTGG