Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01779.2
CDS Infomation

gene=orange1.1t01779
Sequence

ATGTATGAATTCTTACAGATAGGATTAAATCTCCACACTTCATGTTCTGGAATTTCAAGA
ACAGCAAATGATGATAAATCCCACACAGAACTGAGTGAGCTTAAAGGCGAGTTACAAAGG
TTGCACGAAGAGAACAGAAAGCTGAGAAACATGTTGGATCAGACAACCAAAAGTTACAAT
GATTTGCAGAGTCAACTACTCTTGGCAATGCAAAAACTGGCACATGGGAGCCCTCAAGGG
CAGGTGAATTTGAAGGCTGGTGCTTTCAATGGCATGCCAAGTCCTTTAATGTTAGCTCAA
CAATTTATGGACCCACGGCCTTCTGCTGCATTGAATGTCAACGAGCCTTCGGTATCCGAT
GACAAGACACGAGAGCTGTCAGCTTCTCCAGCAAATACTGCTGAAGTAATTTCAAAGGAG
CTTGACCATCCTTTGACTAAGAATAATATTCCAGGGAAGCAAGTTTCTAATAGTGAAGAT
GGTGCCGAAACGTCTCAGAGTTGGGGCTCTCCTAAAAGTCCTAAACTTGATCATCAACCA
AAGAACGATGAGCAAGTTTCTGAAGTGCCTTTTCGTAAGGCTAGGGTTTCTGTAAGAGCA
AGATCAGAAGCTCCTTTGATCAGTGATGGATGTCAATGGAGAAAATATGGTCAAAAGATG
GCCAAGGGTAACCCTTGTCCACGCGCCTACTATCGGTGCACCATGGCCGTTGGATGCCCA
GTTCGCAAGCAGGTGCAACGATGCGCTGAGGATAGGACCATTCTCATCACAACTTATGAA
GGAAACCACAATCACCCGCTGCCACCAGCAGCAACAGCCATGGCCAATACAACCTCAGCT
GCGGCCGCCATGCTCCTGTCAGGTTCGAGCACAAGCAAAGACGGTCTAACAAGTTCTGGT
TTCTTTCACTCGGTGCCATTTGCATCAACAATGGCAACTCTATCTGCTTCTGCACCATTT
CCCACCATTACCCTTGACTTAACGCAGAGCCCAAACCCAATGCAATTCCTCCGGGGACCT
TCTTCGTCGTCCACATTTCCTCTACCTTTGCATGGCTACCCACAACTTTTAAGGTACGGC
CCTGCTGCCGGAATGCCAAATAATATGCAATTAGGGCAACGCCATGCTTCAATGGTTGAG
ACGGTCACCGCAGCCATTACTTCCGACCCGAATTTCACAGCTGCCTTAGCTGCAGCAATC
TCAACGATAATTGGGAGCAATAACGGAAACAATGGTAATAACGGGACAAGCGGGAAGCAG
CCTGGCTCTCCACAGCTTCCTCAATCTTGCACTACTTTCTCCACAAATTAA

Peptide Sequence

PEP ID

orange1.1t01779.2
PEP Infomation
Sequence

MYEFLQIGLNLHTSCSGISRTANDDKSHTELSELKGELQRLHEENRKLRNMLDQTTKSYN
DLQSQLLLAMQKLAHGSPQGQVNLKAGAFNGMPSPLMLAQQFMDPRPSAALNVNEPSVSD
DKTRELSASPANTAEVISKELDHPLTKNNIPGKQVSNSEDGAETSQSWGSPKSPKLDHQP
KNDEQVSEVPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCP
VRKQVQRCAEDRTILITTYEGNHNHPLPPAATAMANTTSAAAAMLLSGSSTSKDGLTSSG
FFHSVPFASTMATLSASAPFPTITLDLTQSPNPMQFLRGPSSSSTFPLPLHGYPQLLRYG
PAAGMPNNMQLGQRHASMVETVTAAITSDPNFTAALAAAISTIIGSNNGNNGNNGTSGKQ
PGSPQLPQSCTTFSTN*

Transcript Sequence

Transcript ID

orange1.1t01779.2
Transcript Infomation

gene=orange1.1t01779 CDS=406-1716
Sequence

GACCCCCACTTATAAGCTAAGCTTGTTTTGATACAGCGAGAAAATTACTTGTGTACTTCA
GTTGAAACTTGAAAATACTACATAGCAACAACAACAACAATAAAAACTACTACTACTCTT
TCGTTGGTTATGGAAAAACAACAGCAACGCCGTGAACTGGCACTCTTGCACTCCGGCGAC
TTTCTCCGGCGAAACTCTGATCATCGCATGATGGAGAATTCCATCAATCGTGATAAGCCA
CCGATCCAAGAAATGGATTTCTTTTCTAGTAACAATAATCAATTGCATGATCAAGAAAGA
AAGATCGAATCCTCAACTCTAGTTCTTGATTCTGGTGTCAACGTAAGATTTGAAACACTT
TTATCATTTTAATTTGTCGCAGGGTTGTTTTATGACCACAAGGTTATGTATGAATTCTTA
CAGATAGGATTAAATCTCCACACTTCATGTTCTGGAATTTCAAGAACAGCAAATGATGAT
AAATCCCACACAGAACTGAGTGAGCTTAAAGGCGAGTTACAAAGGTTGCACGAAGAGAAC
AGAAAGCTGAGAAACATGTTGGATCAGACAACCAAAAGTTACAATGATTTGCAGAGTCAA
CTACTCTTGGCAATGCAAAAACTGGCACATGGGAGCCCTCAAGGGCAGGTGAATTTGAAG
GCTGGTGCTTTCAATGGCATGCCAAGTCCTTTAATGTTAGCTCAACAATTTATGGACCCA
CGGCCTTCTGCTGCATTGAATGTCAACGAGCCTTCGGTATCCGATGACAAGACACGAGAG
CTGTCAGCTTCTCCAGCAAATACTGCTGAAGTAATTTCAAAGGAGCTTGACCATCCTTTG
ACTAAGAATAATATTCCAGGGAAGCAAGTTTCTAATAGTGAAGATGGTGCCGAAACGTCT
CAGAGTTGGGGCTCTCCTAAAAGTCCTAAACTTGATCATCAACCAAAGAACGATGAGCAA
GTTTCTGAAGTGCCTTTTCGTAAGGCTAGGGTTTCTGTAAGAGCAAGATCAGAAGCTCCT
TTGATCAGTGATGGATGTCAATGGAGAAAATATGGTCAAAAGATGGCCAAGGGTAACCCT
TGTCCACGCGCCTACTATCGGTGCACCATGGCCGTTGGATGCCCAGTTCGCAAGCAGGTG
CAACGATGCGCTGAGGATAGGACCATTCTCATCACAACTTATGAAGGAAACCACAATCAC
CCGCTGCCACCAGCAGCAACAGCCATGGCCAATACAACCTCAGCTGCGGCCGCCATGCTC
CTGTCAGGTTCGAGCACAAGCAAAGACGGTCTAACAAGTTCTGGTTTCTTTCACTCGGTG
CCATTTGCATCAACAATGGCAACTCTATCTGCTTCTGCACCATTTCCCACCATTACCCTT
GACTTAACGCAGAGCCCAAACCCAATGCAATTCCTCCGGGGACCTTCTTCGTCGTCCACA
TTTCCTCTACCTTTGCATGGCTACCCACAACTTTTAAGGTACGGCCCTGCTGCCGGAATG
CCAAATAATATGCAATTAGGGCAACGCCATGCTTCAATGGTTGAGACGGTCACCGCAGCC
ATTACTTCCGACCCGAATTTCACAGCTGCCTTAGCTGCAGCAATCTCAACGATAATTGGG
AGCAATAACGGAAACAATGGTAATAACGGGACAAGCGGGAAGCAGCCTGGCTCTCCACAG
CTTCCTCAATCTTGCACTACTTTCTCCACAAATTAACTTAACTAGGGCCCGCCCTACGCT
ATGCATAATATATAATCATTTTACATAATTAAGCTTATGGTGGTTTGGCCCTTGAGAGAA
GGAACCCAGGTTTGCTGGGGAAAGCAGCTTGCTAGGTAGCTAGCTGGTAGATATAATTAA
GAAGCTGCATTTTGAGCTATTGCTTCCGATTTAGGGTTTCAGGCATTGGATAACCTGGTG
GTTACATTAATGTCGATGGCTCTCACAGCATGGGGCCAGAGCCTAGAGATAAGTTTTGGC
ATGTCTAAGCCATAAAAGAGGATAAATTTATTGGTGCATACGTTTATTAATCAATAATCA
CCGTGTATAGTTACAATTATGATGTGTATTCCAGAGGTGAACATGTATTGCCTAAGCTTC
TATAGAGCTTTCAGTCAGATGTACAAATGAAACGGTGGATTTATTGTGTCAGACGAAATA
ATTAGTTTGCCGAGTACATACAATACATACATACATATATTATTTCAGTGCTTGAAGATA
TATATTTACAGACCGATATTGAAGTTGTTGTTGCGCAGGCATAATCTAATTTGGAGAT