Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01777.1
CDS Infomation

gene=orange1.1t01777
Sequence

ATGAGGAGATCTTTTACTCTGGTGGATGTGTTTCTGGTACTTGCATTATTTAGTGAAGCT
CCATGGGCTGTCGCGGGCAGCTCACAATGTAGTCAAAGCAATTTAGAGGTATTTCGGCCT
CATAGTGTCTCTATCACTGAATTTGGAGCTGTCGGAGATGGTGTCACTCTAAACACCAAA
GCCTTTCAGAATGCAATCTTCTATCTCAATTCATTTGCAGATAAGGGTGGGGCCAAGCTT
TTTGTCCCAGCTGGCCAGTGGTTGACAGGTAGCTTCGATCTCATCAGTCATCTAACTTTG
TGGTTAGACAAGGATGCAGTAATTCTTGGATCCACGAACTCGGACACTTGGCCGGTTATT
GATCCTCTACCATCATATGGCAGAGGTAGGGAGTTGCCTGGTGGAAGGCATCGGAGCCTC
ATTTTTGGACGCAATTTGACAGATGTGGTCATAACAGGTGATAATGGAACTATTGATGGT
CAAGGCAGCATCTGGTGGGAATGGTTTCGAAATGGAACACTGGATTACACCCGACCTCAT
CTGGTTGAATTGATGAACTCGACTGGGGTTATCATCTCAAATTTGACCTTCTTAAATCCA
CCATTTTGGACCATCCATCCTGTATACTGCAGCCATGTTAAAGTGCAGAATGTCACAATC
CGTGCCCCACTTGATTCACCAAACACAGATGGGATTGATCCAGACTCTTCTGACGATGTC
TGCATTAAAGACTGTTATATTAGCACTGGCGATGATCTGGTTTCCATCAAAAGTGGGTGG
GACGAGTATGGTATTTCATATGGTCGGCCAAGTACAAAAATTACCATCCATGGACTCATT
GGAGAAACTAAATTGGGTGCGGGGATTGCAATAGGAAGTGAGATGTCTGGAGGTGTATCA
GAAGTTCATGCAGAGAACCTGTACTTTTTCAACTCAGTCAGGGGTATTAGGATAAAGACA
TCTCCTGGAAGGGGTGGCTATGTGAGAAATATCTCTATCTCAAATGTGACCTTAAATCAC
GTAGATGTAGCTATAATATTTACTGGTCACTTTGGGGAGCATCCAGATGATTCGTATGAT
CCAAGTGCTCTTCCCATAATAGAAAGGATTACCATAAAAAATGTCATTGGGGAGAATGTA
AAAATGGCAGGCCAGCTAGAAGGTATAGAGGGGGACACTTTTCGTTACATTTGCTTGTCA
AACATTAAGCTCAATGGAGTTTCAGAGTCTCCATGGAATTGCTCCTATATTCAAGGATAT
TCTGACTTGGTTTTCCCAGAAACCTGTGATCCTCTGAAGGAGAGTATCTTTCCCATGCAT
CACTTAGATTGTTACGATCTATCCAATCATTTTAGGAGTTCAAGAAATCAAAAAAGACTT
GCTCGCTTATTATCTTGGTAA

Peptide Sequence

PEP ID

orange1.1t01777.1
PEP Infomation
Sequence

MRRSFTLVDVFLVLALFSEAPWAVAGSSQCSQSNLEVFRPHSVSITEFGAVGDGVTLNTK
AFQNAIFYLNSFADKGGAKLFVPAGQWLTGSFDLISHLTLWLDKDAVILGSTNSDTWPVI
DPLPSYGRGRELPGGRHRSLIFGRNLTDVVITGDNGTIDGQGSIWWEWFRNGTLDYTRPH
LVELMNSTGVIISNLTFLNPPFWTIHPVYCSHVKVQNVTIRAPLDSPNTDGIDPDSSDDV
CIKDCYISTGDDLVSIKSGWDEYGISYGRPSTKITIHGLIGETKLGAGIAIGSEMSGGVS
EVHAENLYFFNSVRGIRIKTSPGRGGYVRNISISNVTLNHVDVAIIFTGHFGEHPDDSYD
PSALPIIERITIKNVIGENVKMAGQLEGIEGDTFRYICLSNIKLNGVSESPWNCSYIQGY
SDLVFPETCDPLKESIFPMHHLDCYDLSNHFRSSRNQKRLARLLSW*

Transcript Sequence

Transcript ID

orange1.1t01777.1
Transcript Infomation

gene=orange1.1t01777 CDS=417-1817
Sequence

CAGGATCGCTGTGTATTGAAGTGTAGTCAGTAGTGTGTGAGACAGAACGAGAGAGAGACA
GAAGGGAAATGGAGGAGCGGATGAAGACATAAGAGGGACCTACTGCTTATTTTCTGGCGG
GCAGCAACGGTCACTATCAATGATATTTTGCTTTGGGTGGTTCTCTCAATGAATGAATGA
CCCATCCAATCACTCACACACTTTGCATATTGGTTGGAGAGAGAAGAGTAAAGGGGGATC
TTGATTTAAATTACCAAACCATATTCATCAAACCTTTCTCTTTCTTTCTATCTATCTTTG
TTCATTAAGATCCAAGTATCAGTTGGTGACTATCTCTGCTTGCTCGTGTCAAGCAAGTGT
TAAAAAGCTTTGCTAAGGCGCTTGGGCTCTAGAGCAAAGCAGCAGATCCCATTCATATGA
GGAGATCTTTTACTCTGGTGGATGTGTTTCTGGTACTTGCATTATTTAGTGAAGCTCCAT
GGGCTGTCGCGGGCAGCTCACAATGTAGTCAAAGCAATTTAGAGGTATTTCGGCCTCATA
GTGTCTCTATCACTGAATTTGGAGCTGTCGGAGATGGTGTCACTCTAAACACCAAAGCCT
TTCAGAATGCAATCTTCTATCTCAATTCATTTGCAGATAAGGGTGGGGCCAAGCTTTTTG
TCCCAGCTGGCCAGTGGTTGACAGGTAGCTTCGATCTCATCAGTCATCTAACTTTGTGGT
TAGACAAGGATGCAGTAATTCTTGGATCCACGAACTCGGACACTTGGCCGGTTATTGATC
CTCTACCATCATATGGCAGAGGTAGGGAGTTGCCTGGTGGAAGGCATCGGAGCCTCATTT
TTGGACGCAATTTGACAGATGTGGTCATAACAGGTGATAATGGAACTATTGATGGTCAAG
GCAGCATCTGGTGGGAATGGTTTCGAAATGGAACACTGGATTACACCCGACCTCATCTGG
TTGAATTGATGAACTCGACTGGGGTTATCATCTCAAATTTGACCTTCTTAAATCCACCAT
TTTGGACCATCCATCCTGTATACTGCAGCCATGTTAAAGTGCAGAATGTCACAATCCGTG
CCCCACTTGATTCACCAAACACAGATGGGATTGATCCAGACTCTTCTGACGATGTCTGCA
TTAAAGACTGTTATATTAGCACTGGCGATGATCTGGTTTCCATCAAAAGTGGGTGGGACG
AGTATGGTATTTCATATGGTCGGCCAAGTACAAAAATTACCATCCATGGACTCATTGGAG
AAACTAAATTGGGTGCGGGGATTGCAATAGGAAGTGAGATGTCTGGAGGTGTATCAGAAG
TTCATGCAGAGAACCTGTACTTTTTCAACTCAGTCAGGGGTATTAGGATAAAGACATCTC
CTGGAAGGGGTGGCTATGTGAGAAATATCTCTATCTCAAATGTGACCTTAAATCACGTAG
ATGTAGCTATAATATTTACTGGTCACTTTGGGGAGCATCCAGATGATTCGTATGATCCAA
GTGCTCTTCCCATAATAGAAAGGATTACCATAAAAAATGTCATTGGGGAGAATGTAAAAA
TGGCAGGCCAGCTAGAAGGTATAGAGGGGGACACTTTTCGTTACATTTGCTTGTCAAACA
TTAAGCTCAATGGAGTTTCAGAGTCTCCATGGAATTGCTCCTATATTCAAGGATATTCTG
ACTTGGTTTTCCCAGAAACCTGTGATCCTCTGAAGGAGAGTATCTTTCCCATGCATCACT
TAGATTGTTACGATCTATCCAATCATTTTAGGAGTTCAAGAAATCAAAAAAGACTTGCTC
GCTTATTATCTTGGTAAATAATGGAATCTTGGCATTTTATCTCCGGTGAAATCACCTTCT
TCTGTGAATGTTGTCATTAGTTGGAAATTTGATTCTTGCCATTTCTCAACACAACCGCCC
AGTGCATTGCCGATGAAAAGATTGCCTGATATGAGTTAAGTGAAGTGCTGATCTGTGGTT
GTTGACCTGCGAGATGGTGTTGAGAAAAGGTTATTTCATGTAATTTTGTGTGCAGTTACG
AATAATTGAGTGAATATCAGAAATGAAGATAGAATGAGCTTACTTCTGCAAAGGTCGTTC
CTTTTTTAATTTTATTGTTTATTATTTTCTTCTGACTGCGTTTGTTGTTTGAAATTTCAG
CAAGAGTAAAAAAAAGTGGGGGATGATGGGATAGAGAGTATACTCTGCCGCTGCTTTAGG
CTATGCATGAAAGTAGCGCAATTTTGTTCTCCCGAAAGATTTCCTTGTATTTGATCATTT
TGGTATACGATGAATTTTATTATAAATATGTGAAATGGGGTTATTTTCACTACACTGATG
CAATGCTTACAAGTCG