Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01771.1
CDS Infomation

gene=orange1.1t01771
Sequence

ATGGAAACGACCGCCATTGCTCAACGCTTTCTTCCATGCATACCTTCCGACACCGGTGAC
CGGTTTCCGATCAAGTACCATCTGGGTTTTGGAGATTTCAGAGTTTCAGAGCGAACCCGA
AATTCTTTCAGACGATTGAGTAGTCGGTTTTCGGATTGCGGACATCAGCAGTATTATGTA
TCGCCAAGGAAAGAAACCAAGAAGAAAGAAAAGGAAAAGAGTTCTGAGATTAAATCAGTG
AGGAAGAAATTGAAGTTTATGAAAAGATTGTCCAGTGACTTGCTCCCTCTTGAGGCTTTT
GGCAACGAGGATGCAAGTAGTTTGAGGAATGAAGAAAGGATTTCAGAAGCAGTACAAGTG
CTACAAGCACAACTCTTGCAGTTGAGATCAGAGCAGAAAGAATTGAAGAAAATGATGAAA
GAGAAGAAAGCACAGATTAAAACCACAATGAAGGAGAGAAAGGGTAATCGCAAATCTGGG
TCATCATCGAGCTCATCATCTGAGTCCAGCGACAGTGATAATGGGGACGTAATTGACACG
ATCCCCTTGAGAAGTAACATTTTGAAACTATCAGAAAACATTGAAGTACAAAAGGAGATA
ATAGTACCGGCTTTAGCTAAATCTGCTACTTCATTGATTCAACAAGACAAGTTGGAGGAT
TGCTGCTTTAGAAGTGGGGGTGAATGCAGAAATTTAAATGGCCGGAGTAACGATCAAGGC
TATGGCATTGTTGAGAGGACAACCACAACAAGAACTAAGAGAATTGAGGTCTGCATGGGT
GGCAAGTGTAAGAAACTAGGAGCTGGAGCTCTGTTAGAAGAATTTGAGAGGAAGGCTGGT
GCTGAATGTGATGTGTCAATGTGCAAATGCATGGGCAAGTGCAGGGATGGTCCTAACCTC
AGGGTTTCAAATAGTCACGATGGAGATTCAGCTATAAGAATACAGGGCTATGCTAAACCT
TCGATCAATTCTCTTTGCATTGGCGTTGGTTTAGAAGATGTGGATATGATTCTGGCAAAT
ATTTTGGGCAAAGATATGAATAATAATTGCATGATGGCTCCTTCTTGA

Peptide Sequence

PEP ID

orange1.1t01771.1
PEP Infomation
Sequence

METTAIAQRFLPCIPSDTGDRFPIKYHLGFGDFRVSERTRNSFRRLSSRFSDCGHQQYYV
SPRKETKKKEKEKSSEIKSVRKKLKFMKRLSSDLLPLEAFGNEDASSLRNEERISEAVQV
LQAQLLQLRSEQKELKKMMKEKKAQIKTTMKERKGNRKSGSSSSSSSESSDSDNGDVIDT
IPLRSNILKLSENIEVQKEIIVPALAKSATSLIQQDKLEDCCFRSGGECRNLNGRSNDQG
YGIVERTTTTRTKRIEVCMGGKCKKLGAGALLEEFERKAGAECDVSMCKCMGKCRDGPNL
RVSNSHDGDSAIRIQGYAKPSINSLCIGVGLEDVDMILANILGKDMNNNCMMAPS*

Transcript Sequence

Transcript ID

orange1.1t01771.1
Transcript Infomation

gene=orange1.1t01771 CDS=98-1165
Sequence

CTTTCATCCTCATTCAAATTTTTGTTGGCAAAAATACATTTCAAATATTTCATCTTCCTG
AAACACTTCAAGTCCGCAAAGCCTCTGAATCCCAGCGATGGAAACGACCGCCATTGCTCA
ACGCTTTCTTCCATGCATACCTTCCGACACCGGTGACCGGTTTCCGATCAAGTACCATCT
GGGTTTTGGAGATTTCAGAGTTTCAGAGCGAACCCGAAATTCTTTCAGACGATTGAGTAG
TCGGTTTTCGGATTGCGGACATCAGCAGTATTATGTATCGCCAAGGAAAGAAACCAAGAA
GAAAGAAAAGGAAAAGAGTTCTGAGATTAAATCAGTGAGGAAGAAATTGAAGTTTATGAA
AAGATTGTCCAGTGACTTGCTCCCTCTTGAGGCTTTTGGCAACGAGGATGCAAGTAGTTT
GAGGAATGAAGAAAGGATTTCAGAAGCAGTACAAGTGCTACAAGCACAACTCTTGCAGTT
GAGATCAGAGCAGAAAGAATTGAAGAAAATGATGAAAGAGAAGAAAGCACAGATTAAAAC
CACAATGAAGGAGAGAAAGGGTAATCGCAAATCTGGGTCATCATCGAGCTCATCATCTGA
GTCCAGCGACAGTGATAATGGGGACGTAATTGACACGATCCCCTTGAGAAGTAACATTTT
GAAACTATCAGAAAACATTGAAGTACAAAAGGAGATAATAGTACCGGCTTTAGCTAAATC
TGCTACTTCATTGATTCAACAAGACAAGTTGGAGGATTGCTGCTTTAGAAGTGGGGGTGA
ATGCAGAAATTTAAATGGCCGGAGTAACGATCAAGGCTATGGCATTGTTGAGAGGACAAC
CACAACAAGAACTAAGAGAATTGAGGTCTGCATGGGTGGCAAGTGTAAGAAACTAGGAGC
TGGAGCTCTGTTAGAAGAATTTGAGAGGAAGGCTGGTGCTGAATGTGATGTGTCAATGTG
CAAATGCATGGGCAAGTGCAGGGATGGTCCTAACCTCAGGGTTTCAAATAGTCACGATGG
AGATTCAGCTATAAGAATACAGGGCTATGCTAAACCTTCGATCAATTCTCTTTGCATTGG
CGTTGGTTTAGAAGATGTGGATATGATTCTGGCAAATATTTTGGGCAAAGATATGAATAA
TAATTGCATGATGGCTCCTTCTTGACAATAGCTCATCCTTTTTATTACTCTCTTGATAGT
TCAGCTGAAACTTGAGATGAACGTTGTTTTGATTTTGGAATTATAAAGATGGTTCCACGA
GGAAGATGGTGACTTACAGCTTAGCAAATGTTATTTAAACTATAATTCTTCTAAATTTCT
TATATTTTTTCTTTTTATGAAAAAAGTGGGTGAGACATACTATTTTTTATTCAAATGTAT
GTTCTCTTTTACATTCGAGGGGGTATTTGGATCATGATATAGAAGTTCGCTCATCTTCTA
ATTTAACCATGCAAATACACACTCAGATTGCGATCACTGTCAAATGAAGAGACAAAATAA
AATTCATGAAAAGGCAGCTGAATTACTAAAGAATGCCAGCTTTCATACATTATTGTTGTG
AATACAAGGGTAAAGATAACAACGATCAACCGTCTAGCAAGTTAGGTCAGTGTACAACAG
TTTCTGGGGTAACTTCAAAGTTAGGGATGAACATATGCCTCAGTTTTGCCGACCGTGCTG
AAGTAGAGTCCACAGTTTTGTGATTCAACAGCTGTGGCAAGGCACAATAACTGGTGAATA
ATCATGCTATTCCATTGAATTCTTCCCAGCTATCTACATCTAACTGCCAAAAAAGGAACA
CAGAGAATAAGGAAAGATACTTTTGCATCAAGTATCCAGAATAAACACATAATACGACTT
GATAATTCAAGGCACTTTAAAACAAGTAGCAGCACAGTCAACCAATTATGGGTGCGTTTG
GGAGTGAAGTGCTGCAGCGTTTAAGATGCAGCTTCTGTGGAATAAAAGCCATATCTGTGG
AGTAGAACTGAGAAAAAATGGCTGCTGAGCAGCTGCCAAAACCTAGCTGCAAGGTGTTAC
CAAACACCGTGGCAGCTGGGCTGCCCACTGCCATACATCACTCCCAAAAGCACCCTACAT
CTTGGAAGTGCACATAAATCCACAGACACACAAATAAGCTCATTAAATTATTCAAAAACA
TCCTCCAAAACAAAATATGAGGTCTCGCTACACACGGGGTTGGGGTCCCTGGGAAAGTAG
AGAAATGTTCCTGGCCAATGGTGGGCACTAATGAAAAATAACTGGTTCTTAACTATTTCT
ATCAATCAATGTCCACTCTCCTCGTGAAATAATATTCATCTTACTGACTTGTTCTGCACC
CTTTGAGAAAACCTACCACTAAAGATGTTATCCTGCTTACTGATGATCAAAATTCCTTAA
CTGGCATTTTCTACCCAGTTCAGTAATACTACACTTCCCAAATAGTATCCCAACATTTTA
CATCCCAAGTAGTAAGGTGGCATTCATCCACTATTCCACTTGTAAAATTACTCATTAGTT
CATCCCACTGTCCAAAAGATGAATGTCACCTCCCTAGTGATGGATAAGGTTGGATTTTAA
TAGTGGGTGTAGTATTATTCTATCCATATTACCAATCAGCCTACATTCATTGACGGGAAT
TCCTAAACAACTTTTAATAATTTTCTATGGAGTTAAAAAGTCTTTATGGAATCAACACGA
GAGGAGTAAAACTCAATTACTCTTATAAGGTACTCTAAAGATCATTTAGGGTTGCAGGGA
TTGTCACAACTCTGCAATGACGAAAACAGTATACAAAAGAACTGAATTAACGAGCTGCAG
CTAGGACATGGTAATGTGAAAATCAAAGCATCATGATGATTTGGATGTCAGTCACTCAAT
AAGTCATTGTATGTGTCAGCAGGAATGTAATAAATAATAATAACTGTGATTAAATGAGAA
CCCAGAGCAGCAAAACATCTAAGAGAGCAAAATGACCTGTAGATGCCACTGTCTCCACAT
ATTATTAGAACGTGCATACAGCAATATGAAAAGCAACGATAGAAATGTAGCAACACAGAC
AAAATTAGCACTAGAAAAGCCATAATTCTTGATTACTCCTTACTACCAAGTTGCCAAGAA
ATGTTATTTGCAATCAGTGAATTTAGGAAGTAATTTTCAGAAAGAGATCATCTTAAATCT
AGAAAAAGAGATATTTTAAATGATTCAATAACAAAAATGATAACATATTGTCCTTCTGGA
CACATTTAGCAGGCAACTCCAAGGAAGTGATGTACATAACATAATACTGTGTCGTCCTTC
AGGATGCATTTTACAAGCAACTCCAGGGAAGGATAAAAACAAACCTCTCCATTTTCACTC
TGTCAAAAGCATTTGGCAAACCTGCCCCTCCTCGACAAGAAGAATAACTGCATCCCTAAA
TTTCTCGTAATCCTCCAATGTATTATAAACCTGATGAGAAATCCTTGCATACCCTGTTAT
AATCCCATCTTTATCCCTAGCTCCAGCCTGAGGCTGACCATCATCCTTTGGCGCCTGATA
ATGAATAGGAACCTCGACTCCAAAGCGCACCCTTAAATGCCCCCTCAACCTCAAGGCATC
ATCCTCACCCATAACCCTCAACCTCGAAGGCAACCCAACCATAACCATTGCCGCACATAT
TTCAGGCGGAGACCCAAGACTTGTTCCCCAAGCATTGGCCAACATTCTCGCCATCTTCAG
GGCTTGCTCATGGTTCCTCTGCATAATCCCATCAATTCCACCCTCAAACCTACTCACAAA
CGTCACAGCTGAGGGTATCACAAGCTGTGCACTGTAGTCTCTAGTCCCAATCCACGCGCT
CTCTATTGGCAATCCATTACCAAACTCATGTGAAACCACCGGGTGATGCATATCAGACGA
TAAAATTGATTTTCTGCAATACAAGAAGGCTACAGATGGTGGGCAAAAAAACCACTTGTG
CAAATTACTAACATAGAAATCGGCTCCAATTTCTTTCACATCAATTTTAATACTACCCAT
AGCATGTGCCGCATCTACAAAGACCTGATCCACACCTTCATCTCTACAAATTTTAACCAA
TTTACGAACGGGAATCACAACACATGGCATTGATGTAATGTGATCGATGATTGCTAACCG
TATCATTTTTCCATCTTTTTTACCCTTTTCAATCCCCTTTTTAAACTCATTGATAATTTC
TTCCTCCGAGGCTAACGGAAACGGTAACTGAACTTCAACAACAGACCCACCTGCACGGGT
GACGTAAGCTTGGATAGATTTTTTAACGGCTTGGAAGGCGCAGTGAAGCATCAAAACGGT
ATCGTTTCTGTGGAACCTCCCTTCGGTAAAACCGCGGCCAATTTGCTGGAGGACGATGGC
GGCAGCGGTGGTTGCGTTGTCGACAAGTGAGATTTCGCCGACGTCATCGGCGTTGATGAG
GTCCTTGACGGCGGCACGTGACTCCAGAATCCCCTTGCGGAGAGAGTTGAAGTAGAAGTC
GTCCGGTTGTTGGAGGAATTTGAGCTGCCACTTTTGCTGGTCGGCGAGTACGGACTTGGG
GCAGCTCCCGAAGCTCCCGTTGTTGATGCGGGCAACGCCGTGTTGGTGGTGAGAGAACTC
GTCGCGGATTTCGGCTTCGGATATGCAGCGAGTGAGTTTGGGTTTTTTAGAGACGTGGTG
AGTCAATTCGCCGTTTCGAGCTTCTTGATCCATGGCTGATGTGTCAGAGTGAGAGTGAAG
AGGGAGAGTGAAAGCAGGGGATGCAGGGTTAAAACTGAGGATAATTTTAATTTTTGGGTG
CTGCGGCAACTGATGCCGTGTCACTCGCTGTGCGGAG