Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01762.1
CDS Infomation

gene=orange1.1t01762
Sequence

ATGAGAAAAGTGAACTGGGCAATTGCATTACATCTAGGAGCGTTAAGGCAACTGGAATCT
AGTTCTTCAATTTCACATAGGAATCCTTTATTACATCAGAGATGGTTTGTCCAAAGAGCA
GCCGCTACCCCTTCGCTCTCCAATTTTCGTTCTTATTCAACCGAAATGCTATCGAATGAC
CTTATAAAGATAATGGAGCAAAGGGTATTGGCTATTGAGCGGAGAAGTGCTTGTCTTGAG
AATCTGGTGAACCAGCCAGAAGCCTCACCAGCAGAGTATTCTAAGGCTAATAAAGAGCTG
CGGAAACTCAGGGATTCCATGCACCTTATAAGTGAGTTGAGGACCAAACAAAAGGAGATT
GATGGGTTGAAATCCCTGATATATGAATGTTCTGAAGATAAAGACATGCTAGATATGGCT
ACTGAGGAATTGTGCCTAGCAATTGATGAAGAGAAAAGATTGCAAAGTCTGCTTCTCAAG
TCATTACTACCTAAGGACGATGCTGATGAAAGGGATTGCATTTTGGAAGTCAGAGCTGGA
ACTGGAGGGGAAGAGGCCTCTTTGTTTGCAGTAGACGTGTTTAAGATGTATGAGAGATAC
TCACAGAAGAAGGGATGGAAGTTTGAAGTTGTCGGTGTGACAGAGTCTGATCTCAGAGGA
TACAAGGAAGCTAGTGCGGCAATCTCTGGAGTTGGTGTTTATGGGAAACTTAAATTTGAG
AGTGGAATTCACAGAGTTCAGCGTGTTCCTTTGACAGAGAAGTCTGGACGAGTTCACACG
AGTGCTGTGTCTGTTGCCATCCTTCCTCAGGCTGATGAGGTTGATGTCCGGTTGAGGAAT
GAAGACTTGAGGATTGATACTTATCGATCTGGAGGTTCTGGTGGTCAGCATGCAAATACC
ACCAATAGTGCTGTTAGAGTAACTCATATCCCAACGGGGATGACTATTTCCATCCAAGAT
GAACGATCTCAACATATGAACAAAGCCAAAGCACTTAAGGTGCTGTGTGCAAAGCTGTAT
GAAATGGAAAGGTCTAGAATTCATTTGAGTCGATCAAAACTTCGATCAGAGCAGATTGGG
AGTGGAGATAGATCTGAGCGTATCCGCACTTACAACTTCCCTCAAGGGCGTGTCACAGAT
CACCGTGTTGGGATCACCCATCATGCAATAAGTGACATGATGGAAGGAGAAAATTTAGAT
ATCTTCATTGATGCTCTTCTTCTACAGCAGGAAATGGATGCAATTGCATCCTTCGGTTCT
ACTCAGTGA

Peptide Sequence

PEP ID

orange1.1t01762.1
PEP Infomation
Sequence

MRKVNWAIALHLGALRQLESSSSISHRNPLLHQRWFVQRAAATPSLSNFRSYSTEMLSND
LIKIMEQRVLAIERRSACLENLVNQPEASPAEYSKANKELRKLRDSMHLISELRTKQKEI
DGLKSLIYECSEDKDMLDMATEELCLAIDEEKRLQSLLLKSLLPKDDADERDCILEVRAG
TGGEEASLFAVDVFKMYERYSQKKGWKFEVVGVTESDLRGYKEASAAISGVGVYGKLKFE
SGIHRVQRVPLTEKSGRVHTSAVSVAILPQADEVDVRLRNEDLRIDTYRSGGSGGQHANT
TNSAVRVTHIPTGMTISIQDERSQHMNKAKALKVLCAKLYEMERSRIHLSRSKLRSEQIG
SGDRSERIRTYNFPQGRVTDHRVGITHHAISDMMEGENLDIFIDALLLQQEMDAIASFGS
TQ*

Transcript Sequence

Transcript ID

orange1.1t01762.1
Transcript Infomation

gene=orange1.1t01762 CDS=53-1321
Sequence

CACTACTTGGTTTGATAGAGTAGGAAGAAAAATAAAGAATCGAGAAAAAGAAATGAGAAA
AGTGAACTGGGCAATTGCATTACATCTAGGAGCGTTAAGGCAACTGGAATCTAGTTCTTC
AATTTCACATAGGAATCCTTTATTACATCAGAGATGGTTTGTCCAAAGAGCAGCCGCTAC
CCCTTCGCTCTCCAATTTTCGTTCTTATTCAACCGAAATGCTATCGAATGACCTTATAAA
GATAATGGAGCAAAGGGTATTGGCTATTGAGCGGAGAAGTGCTTGTCTTGAGAATCTGGT
GAACCAGCCAGAAGCCTCACCAGCAGAGTATTCTAAGGCTAATAAAGAGCTGCGGAAACT
CAGGGATTCCATGCACCTTATAAGTGAGTTGAGGACCAAACAAAAGGAGATTGATGGGTT
GAAATCCCTGATATATGAATGTTCTGAAGATAAAGACATGCTAGATATGGCTACTGAGGA
ATTGTGCCTAGCAATTGATGAAGAGAAAAGATTGCAAAGTCTGCTTCTCAAGTCATTACT
ACCTAAGGACGATGCTGATGAAAGGGATTGCATTTTGGAAGTCAGAGCTGGAACTGGAGG
GGAAGAGGCCTCTTTGTTTGCAGTAGACGTGTTTAAGATGTATGAGAGATACTCACAGAA
GAAGGGATGGAAGTTTGAAGTTGTCGGTGTGACAGAGTCTGATCTCAGAGGATACAAGGA
AGCTAGTGCGGCAATCTCTGGAGTTGGTGTTTATGGGAAACTTAAATTTGAGAGTGGAAT
TCACAGAGTTCAGCGTGTTCCTTTGACAGAGAAGTCTGGACGAGTTCACACGAGTGCTGT
GTCTGTTGCCATCCTTCCTCAGGCTGATGAGGTTGATGTCCGGTTGAGGAATGAAGACTT
GAGGATTGATACTTATCGATCTGGAGGTTCTGGTGGTCAGCATGCAAATACCACCAATAG
TGCTGTTAGAGTAACTCATATCCCAACGGGGATGACTATTTCCATCCAAGATGAACGATC
TCAACATATGAACAAAGCCAAAGCACTTAAGGTGCTGTGTGCAAAGCTGTATGAAATGGA
AAGGTCTAGAATTCATTTGAGTCGATCAAAACTTCGATCAGAGCAGATTGGGAGTGGAGA
TAGATCTGAGCGTATCCGCACTTACAACTTCCCTCAAGGGCGTGTCACAGATCACCGTGT
TGGGATCACCCATCATGCAATAAGTGACATGATGGAAGGAGAAAATTTAGATATCTTCAT
TGATGCTCTTCTTCTACAGCAGGAAATGGATGCAATTGCATCCTTCGGTTCTACTCAGTG
ATGTTACTCAAAAAGGCAGGTTATGCAGGTTAGGAAAGCATTGGCACCCGTTTTATCAGG
CCTATATTGCAGAGTCAGCAAATAGAGATGTTTGATACAATACATGATATTTAAGCCTCA
ATCTCCACAGCGCACTACTGGCTTAAGTGCCTGGCCTTGGTTACTGGATAAGTTACAAGT
TACTTTCTTCGTATAGTATTTATGATTATTATTTTTGAACTATACGTTCTTATTTAAGTA
ATGACGACCCACAGAACTATAGCGCGGATGGAGAGTTATTTCATCGTCATTCTCGCCTCG
TTGGGACAATTATCGGCCCACATGTCCAAGTGGATGATAAAATTAGATTAGATTATAAAT
GTTATCCTTTGGACCCCGCAAATTATTTACTAATTTATGTAGATGATAAAATCATGATAA
GTTGTCTAATATAATAATAAAGTTTGATAAAATTATGATTAGTTGTGTAATCTTGAGGAC
AAAGCTGTGGTCCCCCGTCATACAGTATCCTCACCTTTTGACTTTTGTGATTGTACTACT
GCTAAATTTCATGGAGTTACTTTCTTTCTTTT