Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01759.4
CDS Infomation

gene=orange1.1t01759
Sequence

ATGAGCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAATGGCAAT
GCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCATGCATCTGAAGCAGCA
CCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTCAGTGGAT
GAATTGAAGGAAATTACTGAGAACTTTGGGACTAATGCTTTGATTGGAGAAGGTTCATAT
GGAAGAGTATATTATGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAAGTTGGAT
GCCAGCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAGGTTGAAG
CATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGACTTCCCGTGTGCTTGCC
TACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAGGAAAGGTGTAAAA
GGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAAATTGCTGTAGGGGCT
GCGAAAGGGCTTGAATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCGCGATATT
AAGTCCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTTTGATTTA
TCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGGAACTTTT
GGTTATCATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGATGTATAC
AGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGTCGATCATACACTA
CCACGTGGACAGCAGAGTCTAGTGACATGGGCCACACCGAAACTTAGTGAAGATAAGGTT
AGGCAATGCGTTGATGCAAGACTAGGAGGAGATTATCCTCCCAAGGCAGTTGCAAAGATG
GCTGCAGTTGCTGCTCTGTGTGTTCAGTATGAAGCTGATTTCCGTCCAAATATGAGCATT
GTTGTCAAAGCCCTCCAGCCCCTGCTAAATGCACGGCCTGGACCTGCTGGTGAATCAGCA
AGCTAG

Peptide Sequence

PEP ID

orange1.1t01759.4
PEP Infomation
Sequence

MSCFGCCEEDDMHKAADNGNAYMVKSSAGTDGAYHASEAAPKGAQAVKVQPIEVPAISVD
ELKEITENFGTNALIGEGSYGRVYYGILKSGHAAAIKKLDASKQPDEEFLAQVSMVSRLK
HENFVQLLGYCVDGTSRVLAYEFASNGSLHDILHGRKGVKGAQPGPVLSWQQRVKIAVGA
AKGLEYLHEKADPHIIHRDIKSSNVLIFDDDVAKIADFDLSNQAPDMAARLHSTRVLGTF
GYHAPEYAMTGQLNAKSDVYSFGVVLLELLTGRKPVDHTLPRGQQSLVTWATPKLSEDKV
RQCVDARLGGDYPPKAVAKMAAVAALCVQYEADFRPNMSIVVKALQPLLNARPGPAGESA
S*

Transcript Sequence

Transcript ID

orange1.1t01759.4
Transcript Infomation

gene=orange1.1t01759 CDS=728-1813
Sequence

GTTTTGCAATATTTGAGCAACATTCAGGCCATCAATCTGAAATTAACTAGTGGCGGCTTA
TGCCCTACGAAAATTTTATGCTCAAAAAATTAATGTTATTTTTTTTTTTAATTCACGGGA
GGCTGCAACTGAATTATGTGTTTCTACTGTAATTTTGAATATTATTTTATTTAATATGCT
TTTGTTATTGGTTCGATCTAGAATTATGGTGGCTGAATTGGATTGATTGAACTGTAGCTT
GATAACGTGAACTATTCACAATTTCCATTGCTTAGATTTTGAAAAGTATACTGCCATGTC
TTGCTTTAACCTGGCTGCCACTATTGCGTATTCTTCTACATAGATCAGCCCTTCTTACCT
GTGTACATAGATTTCGTTAAGAGTTATAAGCATGCATGGCATGTTTGGATGTCCCATCAA
ATTGTTGTATATCCGAGAATGTGGTTGGTAATGAACTTACAGCTATTTCCAATTAGTTTC
AGAATTTTGAAACGGTGGGAATACTTTATTCACAACTCAATCAAATGATTTATGCACTCT
AATCGGATGATATAATCCATTCTTTTGGTGATAGCATGATTGAATATTTGTTGAGGTCTT
CTGTTAGAAAAGGTTTAATGATCATCATCTAATCATCAACATCTTCAAATTGTTTATTCG
GCTGCTTCTAACTAAATTAAATTGGAAATTTTGGAATCAGAGAGGGGCATTATTGTGGCA
GTGAATCATGAGCTGCTTCGGCTGTTGTGAAGAAGATGATATGCATAAAGCTGCTGACAA
TGGCAATGCATACATGGTTAAAAGTTCAGCAGGAACTGATGGAGCCTATCATGCATCTGA
AGCAGCACCTAAGGGTGCTCAAGCTGTGAAAGTCCAGCCCATTGAAGTCCCAGCAATTTC
AGTGGATGAATTGAAGGAAATTACTGAGAACTTTGGGACTAATGCTTTGATTGGAGAAGG
TTCATATGGAAGAGTATATTATGGGATTCTTAAAAGTGGACATGCTGCAGCAATAAAAAA
GTTGGATGCCAGCAAGCAACCTGATGAGGAGTTTTTAGCACAGGTTTCCATGGTATCAAG
GTTGAAGCATGAAAACTTTGTTCAGCTGCTCGGGTATTGTGTTGATGGGACTTCCCGTGT
GCTTGCCTACGAGTTTGCATCTAATGGATCTCTTCATGATATTCTTCATGGGAGGAAAGG
TGTAAAAGGAGCTCAGCCTGGTCCTGTTTTGTCATGGCAACAGCGAGTGAAAATTGCTGT
AGGGGCTGCGAAAGGGCTTGAATACTTGCATGAGAAGGCAGATCCTCATATTATCCATCG
CGATATTAAGTCCAGCAATGTACTAATTTTTGATGATGATGTAGCAAAGATTGCCGACTT
TGATTTATCTAATCAAGCTCCTGATATGGCAGCTCGCCTTCATTCTACTCGTGTTCTTGG
AACTTTTGGTTATCATGCTCCTGAGTATGCAATGACTGGACAGTTGAATGCAAAGAGTGA
TGTATACAGCTTTGGTGTTGTTCTGCTTGAGCTTCTGACAGGTCGAAAACCTGTCGATCA
TACACTACCACGTGGACAGCAGAGTCTAGTGACATGGGCCACACCGAAACTTAGTGAAGA
TAAGGTTAGGCAATGCGTTGATGCAAGACTAGGAGGAGATTATCCTCCCAAGGCAGTTGC
AAAGATGGCTGCAGTTGCTGCTCTGTGTGTTCAGTATGAAGCTGATTTCCGTCCAAATAT
GAGCATTGTTGTCAAAGCCCTCCAGCCCCTGCTAAATGCACGGCCTGGACCTGCTGGTGA
ATCAGCAAGCTAGTCAAGCTAGTGACTCTCTCTCTCCCCCATTTGTGTGTGGGCAAGTAT
GCGCACACATGCAGGCTTGCAAACTATTAAAAAAGAAAAAGAAAAAAAGAGATTGTTTAG
TAGCACTGGTAGATTATCTGAGCAAGGTTCGAAATCCTTCCATTATACACTGTAATTTTT
TTTGTGGTTGGTTTTGTTCATAGTATGTGAGATTGTTTCTTTCTTACAGCTGGCTGCCTT
AGCGTTTCCCCTAATGCTTATTGTTGGCTTCAAATTCTGTCCTTTACCTTGACCTTCATG
CCTGCAATGGTCGGCATCTTAACTTCAATTTATTCTTCATTTTTAAATCCTATCCAGGTG
GTCGCCTGAGTATAAAATTTAATACTGATACTAACTGGGCACGGAAATCCCTGCTGATAG
TGCTCTATGAATCAGTACGCAGTCCCATTTAAGGATCTTAGAAAGAGT