Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01739.2
CDS Infomation

gene=orange1.1t01739
Sequence

ATGGCTTCTGTTAGTGTAGTACCTGCTTCTGGAAATACAGTCGGTGTTGATAGGTTACCC
GAGGAGATGAATGACATGAAAATTAGGGATGACAAGGAAATGGAAGCAACTGTGGTTGAT
GGTAATGGGACGGAAGCGGGTCATATAATTGTCACCACTATTGGGGGTAAAAATGGGCAG
CCCAAACAGACAATAAGCTACATGGCCGAACGTGTTGTTGGCCATGGATCTTTTGGAGTA
GTTTTCCAGGCTAAGTGCTTAGAGACTGGTGAAGCTGTTGCAATAAAGAAGGTTCTTCAG
GACAAGAGGTACAAGAACCGGGAGCTGCAAACCATGCGTCTTCTGGACCACCCAAATGTT
GTGTCCCTGAAGCACTGTTTCTTTTCAACAACTGAAAAGGATGAGCTATATCTTAACCTT
GTTCTTGAGTATGTTCCGGAGACCGTTCACCGGGTGATCAAACATCACTATAAAATGAGC
CAAAGGATGCCATTGATTTACGTCAAACTTTACTTTTACCAGATATGTAGAGCACTTGCT
TACATCCATAACACTATTGGAGTTTGCCACAGGGACATAAAGCCTCAAAATTTACTGGTC
AATCCACATACCCACCAGCTGAAATTGTGTGACTTTGGAAGTGCAAAAGTTCTGGTAAAG
GGGGAACCAAATATCTCTTACATATGTTCAAGATACTATCGAGCACCTGAACTTATATTT
GGTGCAACTGAGTACACCGCAGCAATTGATATCTGGTCTGCCGGCTGCGTTTTGGCTGAA
CTGCTACTGGGACAGCCTCTTTTCCCTGGCGAGAGCGGTGTAGACCAGCTTGTGGAAATC
ATCAAGGTTTTAGGTACTCCAACTAGGGAAGAAATAAAGTGCATGAATCCAAACTACACT
GAGTTTAAATTTCCCCAAATCAAAGCTCACCCGTGGCACAAGATATTCCAGAAGCGTATG
CCCCCAGAAGCTGTAGATCTTGTCTCTAGACTACTGCAGTACTCTCCCAATCTTCGGAGC
ACAGCATTGGAAGCTTTGATTCATCCTTTCTTTGATGAACTACGTGATCCTAATACCCGA
CTCCCAAATGGACGCTTTCTTCCACCATTGTTTAACTTTAAGCCTCATGAACTGAAGGGT
GTGCCCGTGGATATGTTGGTGAAGCTGATCCCTGAGCATGCAAGAAAACAGTGTGCCTTC
CTTGGTTTGTGA

Peptide Sequence

PEP ID

orange1.1t01739.2
PEP Infomation
Sequence

MASVSVVPASGNTVGVDRLPEEMNDMKIRDDKEMEATVVDGNGTEAGHIIVTTIGGKNGQ
PKQTISYMAERVVGHGSFGVVFQAKCLETGEAVAIKKVLQDKRYKNRELQTMRLLDHPNV
VSLKHCFFSTTEKDELYLNLVLEYVPETVHRVIKHHYKMSQRMPLIYVKLYFYQICRALA
YIHNTIGVCHRDIKPQNLLVNPHTHQLKLCDFGSAKVLVKGEPNISYICSRYYRAPELIF
GATEYTAAIDIWSAGCVLAELLLGQPLFPGESGVDQLVEIIKVLGTPTREEIKCMNPNYT
EFKFPQIKAHPWHKIFQKRMPPEAVDLVSRLLQYSPNLRSTALEALIHPFFDELRDPNTR
LPNGRFLPPLFNFKPHELKGVPVDMLVKLIPEHARKQCAFLGL*

Transcript Sequence

Transcript ID

orange1.1t01739.2
Transcript Infomation

gene=orange1.1t01739 CDS=572-1783
Sequence

AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGAGAATACTGCTTTACAGGG
GAAAAGAGAGAAAAGCAAGTAGGGAGACGGAGTGGAGACTGGAGAGGCGACTCGAAAATG
ATGAAAGGGGAGGAGGTGGGGGCCCAGGGGAGGTTTGAACGGTCAAAAAGAAGAAACAAA
ATGAAGGACATAAACAAATAAAATAGAATGGTGTTGGGCTCCGTGTGTCTGCCGTTGTTG
ACTCACTCACCGCCTGTGTCACCACCACCACCACCAATAGCATTGCCATTTTCCACTTGC
CACCATTCGCTCAATCAGTCAAAAGAACAGACCAAACCAAACAAAAAACTCCTCTCCCTT
CTCTCTCTCTCTCTCTCTTTATCACTTCACAGCATTTCCCCTATCACAGTATACAGATCC
ATTTATCTGAAAGCCGAACAATTTACCTTTTTAATTTTTTCTTTTTAGTTATTGCGCTTA
TGGATCTACCCAATTTTTCACCCGATCGGTGAGTTATTAATTAGTGAAGGTGAATTTGGA
AGGGGGTGGAAGGTTTTGTTATTTCTTTAGAATGGCTTCTGTTAGTGTAGTACCTGCTTC
TGGAAATACAGTCGGTGTTGATAGGTTACCCGAGGAGATGAATGACATGAAAATTAGGGA
TGACAAGGAAATGGAAGCAACTGTGGTTGATGGTAATGGGACGGAAGCGGGTCATATAAT
TGTCACCACTATTGGGGGTAAAAATGGGCAGCCCAAACAGACAATAAGCTACATGGCCGA
ACGTGTTGTTGGCCATGGATCTTTTGGAGTAGTTTTCCAGGCTAAGTGCTTAGAGACTGG
TGAAGCTGTTGCAATAAAGAAGGTTCTTCAGGACAAGAGGTACAAGAACCGGGAGCTGCA
AACCATGCGTCTTCTGGACCACCCAAATGTTGTGTCCCTGAAGCACTGTTTCTTTTCAAC
AACTGAAAAGGATGAGCTATATCTTAACCTTGTTCTTGAGTATGTTCCGGAGACCGTTCA
CCGGGTGATCAAACATCACTATAAAATGAGCCAAAGGATGCCATTGATTTACGTCAAACT
TTACTTTTACCAGATATGTAGAGCACTTGCTTACATCCATAACACTATTGGAGTTTGCCA
CAGGGACATAAAGCCTCAAAATTTACTGGTCAATCCACATACCCACCAGCTGAAATTGTG
TGACTTTGGAAGTGCAAAAGTTCTGGTAAAGGGGGAACCAAATATCTCTTACATATGTTC
AAGATACTATCGAGCACCTGAACTTATATTTGGTGCAACTGAGTACACCGCAGCAATTGA
TATCTGGTCTGCCGGCTGCGTTTTGGCTGAACTGCTACTGGGACAGCCTCTTTTCCCTGG
CGAGAGCGGTGTAGACCAGCTTGTGGAAATCATCAAGGTTTTAGGTACTCCAACTAGGGA
AGAAATAAAGTGCATGAATCCAAACTACACTGAGTTTAAATTTCCCCAAATCAAAGCTCA
CCCGTGGCACAAGATATTCCAGAAGCGTATGCCCCCAGAAGCTGTAGATCTTGTCTCTAG
ACTACTGCAGTACTCTCCCAATCTTCGGAGCACAGCATTGGAAGCTTTGATTCATCCTTT
CTTTGATGAACTACGTGATCCTAATACCCGACTCCCAAATGGACGCTTTCTTCCACCATT
GTTTAACTTTAAGCCTCATGAACTGAAGGGTGTGCCCGTGGATATGTTGGTGAAGCTGAT
CCCTGAGCATGCAAGAAAACAGTGTGCCTTCCTTGGTTTGTGATTTGGTTCTCCAAAAGT
TGAAGCCTGCTCCTTGCAGGTTGTAGCTTTGCATAAATATTTGATCTGCTGTAGAGATGT
AGCTAGTGGCCTGTATCAAGTGAAAATATGGAAAAGCTGTGCTATTTGTTTCGTAACCCT
TAGTTCATTTGTTCCGTTTATTGATTTTTTTAGCATTTATATTCTTATCTTTCTTTGTTT
GTAGAAAGCAGATGGAGAAGAGTCTGCTTAATATTCACACGATAATTCAATGGATATGCT
GACCAGATTGTAATGTCAATTGGAAACCATATGTTGTTTTCCTCCCACGAATTTATTGGA
CTAATATTATGATAGAACTGAATGTTCCCGAGAGTGCCCTAAGATTATCCCTCAAAACTT
TTTTTATGTTGATTAATAATGCGCTATATATTCATTTAGAAAT