Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01722.1
CDS Infomation

gene=orange1.1t01722
Sequence

ATGCACACCGTCGCCCTTGTTGCCTTGAGTGGCTCTCGCTTTCTTGCCAGGCCCAGTCCC
ACTCTCTTTCTTCATACAAATGCAAATGCAAAAAGCAGAAATTATAGCTCTAGACCTTTT
TGCAGATGCTGTCTAAGGAGGAAGCAGAACAGGCAAAGTCTCAGCAAAACTTGGCCATCC
ATTTCACTCGCACTGTTTAGTGCAGGCTTCTTTCTGGGTCCCGCTATTGATGGACTTCAT
TCTAGGGTTAATCTTGTGGTATACGAAAATGGGTCAATCAACGTTGGTCCACTTCACACA
AACATCTGGGTTCCTCCTCTGCTTGGATTGTTTTATTGCACTGTTGGGTTGCTGCAACTC
TTCTTGGATGACACTGACAGTGACAGGGCCTCCTCGGAGTCGGAGGTTCCTGATGATGGG
AGCCTTCAGAAGACAGTTTTTGCACTTATAACACTCCTTCTATTCATAGAATTAAGTGCT
GAACTGTATAAAGCTGGAGTTGGAGACAACATTGAGGCCTACATATTATTTGCAGTAGCA
GAGCTTATATGGTTTTCCCTGGATAGGACTTGGCTCGGGTTTACCCTGGCATCTATTATA
GGCCTAGTCTGTCCACTGGCTGAGATTCCCATAATGAAGCTTTTTCACCTTTGGTATTAC
CCAAAAGCAAACATTGAAATCCTTGGCCAGGGATTGGTCGCCTGGACAATCACTTGCTAC
TTTGTGTACACACCGTTTCTCATTAATTTATCACGCTGGCTGAGATCAATCGTAGTTGCT
GCGGATTCAGAGGGCAAATCTACATAG

Peptide Sequence

PEP ID

orange1.1t01722.1
PEP Infomation
Sequence

MHTVALVALSGSRFLARPSPTLFLHTNANAKSRNYSSRPFCRCCLRRKQNRQSLSKTWPS
ISLALFSAGFFLGPAIDGLHSRVNLVVYENGSINVGPLHTNIWVPPLLGLFYCTVGLLQL
FLDDTDSDRASSESEVPDDGSLQKTVFALITLLLFIELSAELYKAGVGDNIEAYILFAVA
ELIWFSLDRTWLGFTLASIIGLVCPLAEIPIMKLFHLWYYPKANIEILGQGLVAWTITCY
FVYTPFLINLSRWLRSIVVAADSEGKST*

Transcript Sequence

Transcript ID

orange1.1t01722.1
Transcript Infomation

gene=orange1.1t01722 CDS=156-962
Sequence

CAAACTTGTGCGGTCTAGATTTGATGATGGATGGTCCTTCGAAGGTCCGAAAACTGAAAA
TGCACTGCCAACTGAAACTACGGACGTTTCAGAAAAAATGAAGAAAGCAGATGACGTCCT
TCTAACTTGGCAGTTGACAAAGAGAGGAGAAGAAGATGCACACCGTCGCCCTTGTTGCCT
TGAGTGGCTCTCGCTTTCTTGCCAGGCCCAGTCCCACTCTCTTTCTTCATACAAATGCAA
ATGCAAAAAGCAGAAATTATAGCTCTAGACCTTTTTGCAGATGCTGTCTAAGGAGGAAGC
AGAACAGGCAAAGTCTCAGCAAAACTTGGCCATCCATTTCACTCGCACTGTTTAGTGCAG
GCTTCTTTCTGGGTCCCGCTATTGATGGACTTCATTCTAGGGTTAATCTTGTGGTATACG
AAAATGGGTCAATCAACGTTGGTCCACTTCACACAAACATCTGGGTTCCTCCTCTGCTTG
GATTGTTTTATTGCACTGTTGGGTTGCTGCAACTCTTCTTGGATGACACTGACAGTGACA
GGGCCTCCTCGGAGTCGGAGGTTCCTGATGATGGGAGCCTTCAGAAGACAGTTTTTGCAC
TTATAACACTCCTTCTATTCATAGAATTAAGTGCTGAACTGTATAAAGCTGGAGTTGGAG
ACAACATTGAGGCCTACATATTATTTGCAGTAGCAGAGCTTATATGGTTTTCCCTGGATA
GGACTTGGCTCGGGTTTACCCTGGCATCTATTATAGGCCTAGTCTGTCCACTGGCTGAGA
TTCCCATAATGAAGCTTTTTCACCTTTGGTATTACCCAAAAGCAAACATTGAAATCCTTG
GCCAGGGATTGGTCGCCTGGACAATCACTTGCTACTTTGTGTACACACCGTTTCTCATTA
ATTTATCACGCTGGCTGAGATCAATCGTAGTTGCTGCGGATTCAGAGGGCAAATCTACAT
AGGTGATGTGCTAAGAATTTGTCAAAAGTTTCAAACCAGAGTTTTCAAGAAGAGCAAGGG
AAAGCCTTGGAAGCACAGATCATAGGCTTAAATGAACCATTCGGAATTCACAAACTTTAT
TTATATAACAATCTAGAAACAGATTTTCTGATATACATTGTTTTATCTATTACTACTTCA
ACCTAATTCACAGATGCTAGACATCTTTTTAACATTGGCATTAATTTGCGCCAATAAGGA
GTCTGATTCCTATCTTCAATCCTTGGAAAGCCTTTCAAGTTGTGCTGTTATCTCAACATG
ATGAATTCTACCAAAAACCAAGTAAATAATAAGCCAAAAATAACAACTTTATCCAAACAA
CTCTTGCAGACAAGATAATTTAGAAATACATATTAGTTATTCAGCGAATGTTTTCAAGGT
TCGACATTCTCAACCGGAGGAGTGAGACACCCTGAATACAAGAAGTATACGCATGTCAAT
AAATCAGCCACAAACCCAAAACTCATTGTAAACAAGTGATCTTGAACCTCATAAAATGTA
CAACAGATTGTTTTTACTTTTGAGTCTATGATACTAAGAGCAACCTAGTCAGTGAAGACA
ACATTCTCAATATCTGGGAACTTCTCTTTGATGGCTGCTCTAATGCCCGATGCAATGGAA
TCAGGCCCCACATACTTTACAATGCAATCCCCACTCTCAACAGATAACACTTCCACGCTT
CCACCATAATTCTTAATGGCAGGTCTCAGTATATCAAGGTGACCATTTACTGCCTGCATT
CACAAAACATGCAGAACGCTCAAGTCTCACAAAGGAACTGCAGTAGTGTAGTAATATCTT
TTATCACTTATCAGACATAAAAGTAGAGCACTCACCTCAACTGTGGTCTCTCTTACTTCT
TCATCATACACTTGGCGGATATCCTTGATTGCATCTCCAAATTTTTCCTTCAATACTCTC
TCAATTCCCATCGACATGGTTGTTGTTGAGCTCGGGCAGCTGCCACATGCTCCTGTTGAT
CAATCTAACATCAGCAAAATCTCTGTTTGGATAATGATTAAAGACTTTATCTATTCATTC
TGAAAATCCATCAAGTCCCTTTTTTCCACTCCTATCACCACTTTATAAAAAGCTGCAGCC
CTCAAATTGTTATACAGAGAGTTTGAAATGGTGATCTCCGGAGACAATCAGCAGCTAGAC
AAGGTAATTCTATGCCCCTAATATGGTCCATCTATTGGTAAAAGAAACAGATTGTTTCTT
CCTTTCCCTTGCCCATAAAAGAGCGACAGAAGTTAAATAAGATCTTTTAAATTCAGTGCA
CCAGCCTTTCAAGCTTTTACATTGATCGGACTGGTTTCCTTTGTACTTAAACTAACTCCC
ACTACACCAAATGCTTATCACAAATGTGGTGCCTCACCCCTTAGGGCTAGGTTTTGGGGT
TGAGAGAGGACTCAGGCCGCCTAACATGCACAAGCAAGCTTCACAAAATCCACCATAATA
ACTTTGTTTCATAGAAATATACTACTAATCCACAAGATATTTCACTCAATTCCAACACCA
AAAAAATAAGTTTTCTCTAATAACTCCAAAAAAAAAAATGAATGATTTTAGATGTCTTGA
ATTCTCGGTAGAATGCTAATAACAACTATATTCTTCATTCAATGCAAACGCAGAGGCAAA
CAAGTTCAAAAATTTCATGGAGTTTATTCACCTTGGAGCTTGACAGAGACGACGCCGTCT
TCAACGGAAACAACGTCGATGTTTCCTCCATCGGCGATCAAATAAGGCCGCACGTCTTCG
AGAACAAGGTCGACGTTTTTAGCCGTGAGGTCGAACTGGTGGGCGGAGTAGAGGCCAGGT
GATGAGCCAGCGGGCGCGCTTGGGTTCGAAGCTCGTATCGCTGTTTCATGCGATCCGCTT
TTTTGCAAGACTGAATTTTTTGGTTTAATTGATATGAATTGCAAGCGTTCATTGAACTTT
GTTGGGAATTGGCTTTTTGAAGAGATCGTCGGCGTCTTTGATATTCTGGTGGCTGCTGTT
AGGCTTAGACACGCCATTCTTTTGCGGCTTTTCTGATATTTTTTTTTCCCCAAAAAGGCT
GTTTAAAAACAAATCTTGGACATATATTCTCTTAACATTCTTATTTATTTT