Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01713.1
CDS Infomation

gene=orange1.1t01713
Sequence

ATGGAGAGGAAGGAAGTTACAAAGACGAAGAATAATAACAATATGGGATCATCACCATTT
GCTGATCATCTTTCAACTGGTTCTCAGCTTCGAGGCGTATTTGACTTGTACGAGGGAGAG
AAGGGGTCATTAGGGTTTATGGAGTTACTGGGTGTTCAAGACTTTGGTTCTTCTTCTCCT
CCTTCTTCTTCTTTATTTGATATGGTACAGTTCCAGGCACAGAATCAGGTTCCGTCTAAA
GGAGCATCAGCATCTTCAACTGTCAATGTTACAAAGATTGAATGTTCTGAGTTGTTGAAT
CAGCCGGCGACGCCTAACTCTTCCTCGATTTCATCTGCATCGAGTGAGGCTTTGAATGAT
GAACAAGTTAAAGTAGAAGAGCATGTACATGATGAACAAAATCAACAAAAAACCAAGAAA
CAGTTGAAGCCCAAGAAGACAAATCAGAAACGACAGAGAGAGCCGAGATTCGCGTTCATG
ACAAAGAGCGAGGTTGATCATCTGGAAGATGGATACCGATGGAGGAAGTACGGTCAGAAG
GCCGTTAAGGACAGCCCCTTTCCTAGGAGTTACTATCGTTGCACCAGTGCTTCATGTAAT
GTGAAGAAAAGAGTGGAGAGATCTTACACTGATCCAAGCATTGTCGTGACGACCTACGAG
GGCCAGCACAACCACCCGAGTCCACTCCTACCACGTCCAACCCTTGGCGGTGTTCCTCAT
GCTGGAAACGGTGTCGTTGGATCCTCTTTTGGTATGCCAATGCCGGCGGCATTCTCTCAG
CAACAACTGCCCAGCTTGGTTAATTCCTTGTTGCCTATGAATTTTGGGAGTAGTTTTATC
AACGGTCCAACAACTGCTTCTTTTCTTCATGAGAGGCGTTTCTGCACTCCTGCAGCAGGG
ACTGATCTGCTTAAGGATCATGGCCTTCTTCAGGACATTGTTCCTTCACATATGCTAAGG
GAAGAGTAG

Peptide Sequence

PEP ID

orange1.1t01713.1
PEP Infomation
Sequence

MERKEVTKTKNNNNMGSSPFADHLSTGSQLRGVFDLYEGEKGSLGFMELLGVQDFGSSSP
PSSSLFDMVQFQAQNQVPSKGASASSTVNVTKIECSELLNQPATPNSSSISSASSEALND
EQVKVEEHVHDEQNQQKTKKQLKPKKTNQKRQREPRFAFMTKSEVDHLEDGYRWRKYGQK
AVKDSPFPRSYYRCTSASCNVKKRVERSYTDPSIVVTTYEGQHNHPSPLLPRPTLGGVPH
AGNGVVGSSFGMPMPAAFSQQQLPSLVNSLLPMNFGSSFINGPTTASFLHERRFCTPAAG
TDLLKDHGLLQDIVPSHMLREE*

Transcript Sequence

Transcript ID

orange1.1t01713.1
Transcript Infomation

gene=orange1.1t01713 CDS=440-1408
Sequence

CTCGTCCCCGTTCACACAGTGGAATTAAACCCGTAAACCGGTCAAACTCCACGCATGAAA
GCATCGACCAACACCACTACCGTCGGACCGACCGCCAGCGATCTCATGTGCGTATTCAAA
CTCGAAACTTGTTACGGGCGCTGCTTTTATGTCCGTACAAAGTATTGACCTACAATTACC
GGTCAAAGAAATGGAAACATTTGTTGCCACTTAGCCAACTCTACTGTTGCCAAGTCTCAT
CCTTGTTCCTTTGTATACCATTCTCTCTCCATCTCTAAACACCCACCCACCTTATAAACC
AGATCAAAGTTGAAATCTTACCCTACTTCACACTTCAAAAGCCTCACAGTAACTCTCTCT
CTCTCTCTCTCCCTTTCCATTTTGTTCTCTTTTCTTTTGTTTTTTTATGAAGATTAAGAA
GAATTTCAACTGAGGCATAATGGAGAGGAAGGAAGTTACAAAGACGAAGAATAATAACAA
TATGGGATCATCACCATTTGCTGATCATCTTTCAACTGGTTCTCAGCTTCGAGGCGTATT
TGACTTGTACGAGGGAGAGAAGGGGTCATTAGGGTTTATGGAGTTACTGGGTGTTCAAGA
CTTTGGTTCTTCTTCTCCTCCTTCTTCTTCTTTATTTGATATGGTACAGTTCCAGGCACA
GAATCAGGTTCCGTCTAAAGGAGCATCAGCATCTTCAACTGTCAATGTTACAAAGATTGA
ATGTTCTGAGTTGTTGAATCAGCCGGCGACGCCTAACTCTTCCTCGATTTCATCTGCATC
GAGTGAGGCTTTGAATGATGAACAAGTTAAAGTAGAAGAGCATGTACATGATGAACAAAA
TCAACAAAAAACCAAGAAACAGTTGAAGCCCAAGAAGACAAATCAGAAACGACAGAGAGA
GCCGAGATTCGCGTTCATGACAAAGAGCGAGGTTGATCATCTGGAAGATGGATACCGATG
GAGGAAGTACGGTCAGAAGGCCGTTAAGGACAGCCCCTTTCCTAGGAGTTACTATCGTTG
CACCAGTGCTTCATGTAATGTGAAGAAAAGAGTGGAGAGATCTTACACTGATCCAAGCAT
TGTCGTGACGACCTACGAGGGCCAGCACAACCACCCGAGTCCACTCCTACCACGTCCAAC
CCTTGGCGGTGTTCCTCATGCTGGAAACGGTGTCGTTGGATCCTCTTTTGGTATGCCAAT
GCCGGCGGCATTCTCTCAGCAACAACTGCCCAGCTTGGTTAATTCCTTGTTGCCTATGAA
TTTTGGGAGTAGTTTTATCAACGGTCCAACAACTGCTTCTTTTCTTCATGAGAGGCGTTT
CTGCACTCCTGCAGCAGGGACTGATCTGCTTAAGGATCATGGCCTTCTTCAGGACATTGT
TCCTTCACATATGCTAAGGGAAGAGTAGAGATGAAGGAAGATGAGTATATTGATTATCAA
TTTAATTATTATTAGTTTTTTTTTTTTCTATTTAACTGACTTCCGTAAAAGGTTTAGATG
TAAATGTTATGTAATCTACTAGTTGACAGGATCTGATCTTTCTTGCAGAAAGTCTTTTCC
CGCATACCCTTTATGAATGTCATTGTGAAATGGGTTTTTGATCCAATGCAGGAAGGAACT
GGTTTCTTACTTTGTTTGGGTTTAATTTCCTAACTCTTCACTCATTCATTCATTCATTTG
TTTGTCCTATCTATTTGTTTTTGTTGTCGAAGGAATGTGCATTGATTTCATTGAGAGTGC
C