Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01687.1
CDS Infomation

gene=orange1.1t01687
Sequence

ATGGCACAAACGAGCGCTTCCACATCTTCGGCATCGTTGTACTCTCTTGTCGTCTCTCCA
AACCCTAGCTCCAATATCGACGCTCATAAACTCTCTCACACCTTCCGCCCCATTGGTTCC
CGGAAACCAAGGAAACTAGTTAGTATTCAAAAGAATTTGCGGAATTCTTCAGTAAGGGCT
GTCTACTCTGGCAAGTTTTGGGCTCCAGATAGAAGTTATCGCCAGGGGATTTGGTCCATT
AGGGATGATTTGCAAATCCCATCTTCACCATACTTCCCTGTACATGCGCAAGGGCCACCA
CCTGCTAACCCGATGGTGCAAGAGCGGTTTCAGAGTGTTATCAGTCAACTTTTCCAGCAT
AGAATAATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCGAACATTATTGTAGCTCAG
CTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTTATCTATGTCAATTCTCCA
GGAGGATCAGTTACTGCCGGTATGGCCATATTTGACACTATGAAGCATATTCGACCTGAT
GTCTCCACTGTTTGTGTTGGATTAGCAGCTAGTATGGGAGCTTTCCTGCTTAGTGCTGGG
GCCAAAGGAAAAAGATACAGTTTGCCAAACTCAAGGATAATGATTCATCAGCCTCTTGGT
GGTGCACAAGGTGGGCAAACCGACATAGATATTCAGGCTAATGAAATGCTGCATCACAAG
GCAAACCTGAATGGGTATCTTGCCTACCACACTGGTCAAAGTCTTGAGAAGATCAACCAG
GATACTGACCGTGATTATTTTATGAGCCCAAAAGAAGCCAAAGATTATGGGCTTATTGAC
GGTGTTATCATGAATCCTCTTAAAGCACTCCAGCCGCTGCCCGCTGCGGCAGATGGTAAT
GACAAGTCCAGTGTGTGA

Peptide Sequence

PEP ID

orange1.1t01687.1
PEP Infomation
Sequence

MAQTSASTSSASLYSLVVSPNPSSNIDAHKLSHTFRPIGSRKPRKLVSIQKNLRNSSVRA
VYSGKFWAPDRSYRQGIWSIRDDLQIPSSPYFPVHAQGPPPANPMVQERFQSVISQLFQH
RIIRCGGAVDDDMANIIVAQLLYLDAIDPHKDIVIYVNSPGGSVTAGMAIFDTMKHIRPD
VSTVCVGLAASMGAFLLSAGAKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHK
ANLNGYLAYHTGQSLEKINQDTDRDYFMSPKEAKDYGLIDGVIMNPLKALQPLPAAADGN
DKSSV*

Transcript Sequence

Transcript ID

orange1.1t01687.1
Transcript Infomation

gene=orange1.1t01687 CDS=319-1236
Sequence

CAAATCCGGTTACAGGATCCGACCCGTTCTGGATGGGTAGAACAAGGGAGACACCTTCCA
TAATCGAGATATGCATTCTCACATTCATAATCAATTTCACTGAGAAGTCAAGTTAGTGTT
AGTTGCAACTTGCAAGTCATTTTTTGTTGTTGCTGGAACGGTACTCTTATCGGTCCAAAT
CCCGGCGCCGTCCACATCCAGCCTTTAACATCAAGCAGATAAGGCGCTTCTGATTTGGAG
GAAAATAAAAAGCCTCCACCTAATTTACCGAAAACGTCTTTCAGACACTGCCACATAAAC
GGCAAAAATCGAAGAGATATGGCACAAACGAGCGCTTCCACATCTTCGGCATCGTTGTAC
TCTCTTGTCGTCTCTCCAAACCCTAGCTCCAATATCGACGCTCATAAACTCTCTCACACC
TTCCGCCCCATTGGTTCCCGGAAACCAAGGAAACTAGTTAGTATTCAAAAGAATTTGCGG
AATTCTTCAGTAAGGGCTGTCTACTCTGGCAAGTTTTGGGCTCCAGATAGAAGTTATCGC
CAGGGGATTTGGTCCATTAGGGATGATTTGCAAATCCCATCTTCACCATACTTCCCTGTA
CATGCGCAAGGGCCACCACCTGCTAACCCGATGGTGCAAGAGCGGTTTCAGAGTGTTATC
AGTCAACTTTTCCAGCATAGAATAATTCGCTGTGGTGGAGCTGTTGATGATGACATGGCG
AACATTATTGTAGCTCAGCTTCTCTATCTTGATGCTATTGATCCTCACAAGGATATTGTT
ATCTATGTCAATTCTCCAGGAGGATCAGTTACTGCCGGTATGGCCATATTTGACACTATG
AAGCATATTCGACCTGATGTCTCCACTGTTTGTGTTGGATTAGCAGCTAGTATGGGAGCT
TTCCTGCTTAGTGCTGGGGCCAAAGGAAAAAGATACAGTTTGCCAAACTCAAGGATAATG
ATTCATCAGCCTCTTGGTGGTGCACAAGGTGGGCAAACCGACATAGATATTCAGGCTAAT
GAAATGCTGCATCACAAGGCAAACCTGAATGGGTATCTTGCCTACCACACTGGTCAAAGT
CTTGAGAAGATCAACCAGGATACTGACCGTGATTATTTTATGAGCCCAAAAGAAGCCAAA
GATTATGGGCTTATTGACGGTGTTATCATGAATCCTCTTAAAGCACTCCAGCCGCTGCCC
GCTGCGGCAGATGGTAATGACAAGTCCAGTGTGTGACCTACCCATGTGATCATTGCAATT
AATGAAGTGGTAATTTGTAGAGTTAAATTATACTTATTGTTATTGCCTTTCAGTTCATTT
GATTGTTGAAACATTGACATGTATAATACAGAACTGAAGAAAGATGAGTTTTGCTGTCAG
TTTTTGACTTTAAGCTGAAATAAAACTTTAGAAATATATCAAATTGTTGCTACTCTTGTT
TCTTATGAACACATTGATTATTAGTTG