Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01686.2
CDS Infomation

gene=orange1.1t01686
Sequence

ATGGATGATTCTCTCTCTCCAAAATTGGACACACAGTCAGAGGTTTCTGAGCCCCAAGCA
GAAACTCATCAGGCTTCTTCTAAAAGAAGGAAGGTGACTGAGAAGACTGTTGTTAAAGTG
AAGATTGGAGAAAATCCTGGGAAGCTAAAGAACGAAGGGCCACCTTCTGATTTTTGGTCT
TGGAGGAAATATGGACAAAAGCCCATCAAAGGATCTCCCTATCCCAGGGGCTACTACAGG
TGCAGCACATCAAAAGGTTGTTCAGCCAAGAAACAAGTAGAGAGATGTAGAACAGATGCT
TCAATGCTCATCATCACCTACACCTCTAGCCATAACCATCCATGTCCTGATCTGCACACA
ATTAATCTGACAAAACAATCAAAAGAAACACCCCAAAATCATCAACCCACTGGCACTGAG
TTTGAGGACCACCACCCCACGTCTGCTCCTACACAAGAACAGCAGCTGCCACAAGAAGAA
GAGAAACAAAATGAACCACCCATAATCACCACCCCCACTGCTGAAGATTCAAATGAAGAT
CATTTCCATTACTTACAATCACCCATAAGGTGTCCTCAAGATATCATAATTAGCCAAGAA
GACCCCTTTACAGGGAATCTAGAGAAACCCAATGAAACACTGAATCTTCTCTTGGATGAA
GAACCGGTCTCTTATCAAAATCTCATGGCTTTTTCAACACCAAAATCAGAAGAAAATGAC
TTCTTTGATGAGCTTGGAGAACTGCCCAGTACGTCGTCAGTTTTCACTAGCTTCATGAGA
AGCAATGATCTTTTCGATGAAAGGATTCCTGTTGTCCCTTCTTGA

Peptide Sequence

PEP ID

orange1.1t01686.2
PEP Infomation
Sequence

MDDSLSPKLDTQSEVSEPQAETHQASSKRRKVTEKTVVKVKIGENPGKLKNEGPPSDFWS
WRKYGQKPIKGSPYPRGYYRCSTSKGCSAKKQVERCRTDASMLIITYTSSHNHPCPDLHT
INLTKQSKETPQNHQPTGTEFEDHHPTSAPTQEQQLPQEEEKQNEPPIITTPTAEDSNED
HFHYLQSPIRCPQDIIISQEDPFTGNLEKPNETLNLLLDEEPVSYQNLMAFSTPKSEEND
FFDELGELPSTSSVFTSFMRSNDLFDERIPVVPS*

Transcript Sequence

Transcript ID

orange1.1t01686.2
Transcript Infomation

gene=orange1.1t01686 CDS=236-1060
Sequence

TAGCCGAATGGTGCTGATATGTAAATGTAGTTGTTGTTCGTAGCTGCTTTTTATTTAATG
AGTGAAAAGAAAAGGAAAGAAAGCAACTTGATGGTGTTTTTTCTTCCCCCCATCCATTTT
CTTTTAACTTCTCTCTCTTAATCAATAAGAGTCCTCATCTTGATCAATTTTTTTCCCCCT
TACGGAGTGACATCTCAGAAGTAGCAGCAGACTAGCAGCAGAAGCAAGAACAGTTATGGA
TGATTCTCTCTCTCCAAAATTGGACACACAGTCAGAGGTTTCTGAGCCCCAAGCAGAAAC
TCATCAGGCTTCTTCTAAAAGAAGGAAGGTGACTGAGAAGACTGTTGTTAAAGTGAAGAT
TGGAGAAAATCCTGGGAAGCTAAAGAACGAAGGGCCACCTTCTGATTTTTGGTCTTGGAG
GAAATATGGACAAAAGCCCATCAAAGGATCTCCCTATCCCAGGGGCTACTACAGGTGCAG
CACATCAAAAGGTTGTTCAGCCAAGAAACAAGTAGAGAGATGTAGAACAGATGCTTCAAT
GCTCATCATCACCTACACCTCTAGCCATAACCATCCATGTCCTGATCTGCACACAATTAA
TCTGACAAAACAATCAAAAGAAACACCCCAAAATCATCAACCCACTGGCACTGAGTTTGA
GGACCACCACCCCACGTCTGCTCCTACACAAGAACAGCAGCTGCCACAAGAAGAAGAGAA
ACAAAATGAACCACCCATAATCACCACCCCCACTGCTGAAGATTCAAATGAAGATCATTT
CCATTACTTACAATCACCCATAAGGTGTCCTCAAGATATCATAATTAGCCAAGAAGACCC
CTTTACAGGGAATCTAGAGAAACCCAATGAAACACTGAATCTTCTCTTGGATGAAGAACC
GGTCTCTTATCAAAATCTCATGGCTTTTTCAACACCAAAATCAGAAGAAAATGACTTCTT
TGATGAGCTTGGAGAACTGCCCAGTACGTCGTCAGTTTTCACTAGCTTCATGAGAAGCAA
TGATCTTTTCGATGAAAGGATTCCTGTTGTCCCTTCTTGATCCTTGTGTTTTTAGTGTTT
GCTGCCTTAGAAAATGTAACCAAAATGTTCATATATTTATGACTATGACATCCCCACTAC
TTGTAGTTTTG