Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01682.1
CDS Infomation

gene=orange1.1t01682
Sequence

ATGGAGAGACAGAGGAGTTTCTCTCTGAAATCCACGAGATTTGTTGTGTTTTCTTTCACA
ATCACTTCTTCTATCATCTTTTTAACATTCTTTTCTTTCCGGGTCATCAAATTCACTCCT
TTCATTAACCAAGAAACCCATTTTCAGTTGAGCAAACCCGCCGTCAATGTAAGTCTGAAA
CCCTTAACTGTCCAGACCTTGACTGGTTCAAGAAGAAATTTCACGGCACCAAATGCGAAA
AACTTAATCTTGATTGATACACCTGTAAATAAACTTGATAAAACTTCTGGGTTCAGTAAC
TTGTCAGTTTCTGGGGACATTCAGAAAGAGAAAAACGACACTCAAGCGCCCAAAGATGAA
GCAAGCAAAGGTGACGGTCTAAATGTTACTAGCTTAAGTAGAGGTGAAGAGAGTGTACCG
GCACCTTCATTAATTGAAGTTCAAAGCAATGAGAGGCTTCAAGAAAAGAAGATTGGAGCA
GCTTCAGTTGAGAAAATTGAACTTCCCAGTGATCAACAGATCAAAAAGGAGAATGTTAGA
GCAGCTTCAGTCCAAAAAGTTGAAAGGGCAAGTAATAAGAGAATTGAAGAGAAGAAGACA
AGAGACTGTGACATTACCAACGGGAGGTGGGCATACGATGAAAGCTATCCTTTATACACA
AATACTACCTGTCCTTTTATTGATGAGGGTTTCAATTGTATGAGCAATGGGAGACTAGAT
AAACACTACATTAAGTGGAAATGGCAACCACACGATTGTGACATACCGAGGTTCAATGCA
ACCAAAATGCTGGAATTGATCCGAGGTAAAAGGCTGGTTTTTGTGGGCGATTCAATTAAT
AGAAATCAATGGGAATCGATGCTGTGCATGTTATTCGGAGCTGTTAGAGATCCAAGGAAG
GTCTATGAGACCCATGGACGAAGAATCACAAAAGAGAAGGGAAATTATTGTTTCAAATTT
GTGGATTATAAATGTACAGTTGAATATTATGTCAGCCATTTCTTAGTTCATGAGGGCAAG
GCAAGGGTAGGGCAGAAGCGGGTGCAGACATTAAGAATTGATTCTATTGATCATGGATCA
TCAAGATGGAGAGGAGCTGATATCTTGATTTTCAACACTGCTCATTGGTGGTCTCACTAC
AAAACAAAAGCTGGGATTAACTATTACCAGGAAGGAGATCAAGTGCTTCCCCGACTTGAT
GTCTCCACAGCTTTTAAAAGAGCGCTGATGACTTGGGCTTCATGGGTTGATAAACGCATC
AATCCAAGGAAAACCCAAATTTTCTTTCGAAATTCAGCGCCTTCCCATTTCAGGGGAGGT
CAATGGAATGCTGGTGGCCACTGTGCAGAAGCCACCCAACCCCTTAATGAAATCTCAGGT
TTCAGCTACCCAGAGAAGAATGTCATCATAGAAGATGTGATAAAGCAGATGAGAACTCCT
GTGACACTCTTGAATATAACTAGTTTGTCAGAGTATAGGATAGATGGTCATCCATCCATA
TATGGAAGAAATAAACGCTACTCTTCAAACATTCAAGACTGCAGCCATTGGTGTCTTCCT
GGTGTTCCTGATACTTGGAACGAACTTTTATATTTCCAGTTGCAATCTAAAAAAGAATAA

Peptide Sequence

PEP ID

orange1.1t01682.1
PEP Infomation
Sequence

MERQRSFSLKSTRFVVFSFTITSSIIFLTFFSFRVIKFTPFINQETHFQLSKPAVNVSLK
PLTVQTLTGSRRNFTAPNAKNLILIDTPVNKLDKTSGFSNLSVSGDIQKEKNDTQAPKDE
ASKGDGLNVTSLSRGEESVPAPSLIEVQSNERLQEKKIGAASVEKIELPSDQQIKKENVR
AASVQKVERASNKRIEEKKTRDCDITNGRWAYDESYPLYTNTTCPFIDEGFNCMSNGRLD
KHYIKWKWQPHDCDIPRFNATKMLELIRGKRLVFVGDSINRNQWESMLCMLFGAVRDPRK
VYETHGRRITKEKGNYCFKFVDYKCTVEYYVSHFLVHEGKARVGQKRVQTLRIDSIDHGS
SRWRGADILIFNTAHWWSHYKTKAGINYYQEGDQVLPRLDVSTAFKRALMTWASWVDKRI
NPRKTQIFFRNSAPSHFRGGQWNAGGHCAEATQPLNEISGFSYPEKNVIIEDVIKQMRTP
VTLLNITSLSEYRIDGHPSIYGRNKRYSSNIQDCSHWCLPGVPDTWNELLYFQLQSKKE*

Transcript Sequence

Transcript ID

orange1.1t01682.1
Transcript Infomation

gene=orange1.1t01682 CDS=268-1887
Sequence

ATTATGTTGGTTTTTTTTTTTTTTTTTCAAAATGAGGAAAAAATTTGCCACAATTTGAGG
CCACTTTCCTCTCCCCTGAAGAGTCTAAAACCATCCACATCAAGTCTTCTCCGCTGAGTG
TGGTTGCCACTTCATTTTGTTAAAGTTTATTCATTTCTTTATATGCATGGCTACTTAACA
CCATCGAAACACAACTGTCTTTTGACTTTTAATTGAGGCAATTAGTGTCTCTTAAATCTA
AGTGAGAAAGCAAGGAAGCATTGATTGATGGAGAGACAGAGGAGTTTCTCTCTGAAATCC
ACGAGATTTGTTGTGTTTTCTTTCACAATCACTTCTTCTATCATCTTTTTAACATTCTTT
TCTTTCCGGGTCATCAAATTCACTCCTTTCATTAACCAAGAAACCCATTTTCAGTTGAGC
AAACCCGCCGTCAATGTAAGTCTGAAACCCTTAACTGTCCAGACCTTGACTGGTTCAAGA
AGAAATTTCACGGCACCAAATGCGAAAAACTTAATCTTGATTGATACACCTGTAAATAAA
CTTGATAAAACTTCTGGGTTCAGTAACTTGTCAGTTTCTGGGGACATTCAGAAAGAGAAA
AACGACACTCAAGCGCCCAAAGATGAAGCAAGCAAAGGTGACGGTCTAAATGTTACTAGC
TTAAGTAGAGGTGAAGAGAGTGTACCGGCACCTTCATTAATTGAAGTTCAAAGCAATGAG
AGGCTTCAAGAAAAGAAGATTGGAGCAGCTTCAGTTGAGAAAATTGAACTTCCCAGTGAT
CAACAGATCAAAAAGGAGAATGTTAGAGCAGCTTCAGTCCAAAAAGTTGAAAGGGCAAGT
AATAAGAGAATTGAAGAGAAGAAGACAAGAGACTGTGACATTACCAACGGGAGGTGGGCA
TACGATGAAAGCTATCCTTTATACACAAATACTACCTGTCCTTTTATTGATGAGGGTTTC
AATTGTATGAGCAATGGGAGACTAGATAAACACTACATTAAGTGGAAATGGCAACCACAC
GATTGTGACATACCGAGGTTCAATGCAACCAAAATGCTGGAATTGATCCGAGGTAAAAGG
CTGGTTTTTGTGGGCGATTCAATTAATAGAAATCAATGGGAATCGATGCTGTGCATGTTA
TTCGGAGCTGTTAGAGATCCAAGGAAGGTCTATGAGACCCATGGACGAAGAATCACAAAA
GAGAAGGGAAATTATTGTTTCAAATTTGTGGATTATAAATGTACAGTTGAATATTATGTC
AGCCATTTCTTAGTTCATGAGGGCAAGGCAAGGGTAGGGCAGAAGCGGGTGCAGACATTA
AGAATTGATTCTATTGATCATGGATCATCAAGATGGAGAGGAGCTGATATCTTGATTTTC
AACACTGCTCATTGGTGGTCTCACTACAAAACAAAAGCTGGGATTAACTATTACCAGGAA
GGAGATCAAGTGCTTCCCCGACTTGATGTCTCCACAGCTTTTAAAAGAGCGCTGATGACT
TGGGCTTCATGGGTTGATAAACGCATCAATCCAAGGAAAACCCAAATTTTCTTTCGAAAT
TCAGCGCCTTCCCATTTCAGGGGAGGTCAATGGAATGCTGGTGGCCACTGTGCAGAAGCC
ACCCAACCCCTTAATGAAATCTCAGGTTTCAGCTACCCAGAGAAGAATGTCATCATAGAA
GATGTGATAAAGCAGATGAGAACTCCTGTGACACTCTTGAATATAACTAGTTTGTCAGAG
TATAGGATAGATGGTCATCCATCCATATATGGAAGAAATAAACGCTACTCTTCAAACATT
CAAGACTGCAGCCATTGGTGTCTTCCTGGTGTTCCTGATACTTGGAACGAACTTTTATAT
TTCCAGTTGCAATCTAAAAAAGAATAACTCTGACATGTTTGAATATTCTGCCTGTTGATT
TTCTTGGCAGATTGTAAAATGTAATTTGTACTGGTTTATTGCAAATGTTTTGATTGATAT
TTATTTTCTTGGACCGAAGAAGACTTGAAAACGTGGAAA