Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01622.1
CDS Infomation

gene=orange1.1t01622
Sequence

ATGGTTCTTTCAAAGACATTTTCCGAATCCGATGAGTCAATTCACTCCACCTTTGCCTCT
CGCTACGTCCGAAACTCTCTTCCTCGGTTCACGATGCCGGAGAACTCGATACCGAAGGAG
GCGGCGTACCAGATCATAAACGACGAGCTGATGCTCGACGGGAATCCAAGATTGAACTTG
GCTTCCTTCGTCACAACGTGGATGGAGCCTGAATGTGACAAGCTTATGATGGCTGCCATT
AACAAGAACTACGTTGACATGGATGAGTATCCTGTCACCACCGAGCTTCAGAATCGATGT
GTGAACATTATAGCCCGACTGTTCAATGCTCCACTGGAGGACTCCGAGACGGCTGTCGGA
GTTGGAACCGTAGGATCATCGGAAGCCATAATGTTGGCCGGCCTTGCATTCAAAAGAAAG
TGGCAGAACAAGCGCAAGGCTGAAGGAAAGCCCTTTGACAAACCCAACATTGTCACTGGA
GCGAACGTTCAGGTCTGCTGGGAGAAATTTGCAAGGTATTTTGAGGTGGAGTTGAAGGAA
GTGAAGCTGTCGGAAGGCTACTACGTGATGGACCCAGCCAAAGCTGTAGAAATGGTGGAT
GAAAACACTATCTGTGTTGCTGCTATTCTGGGTTCTACTCTCAATGGAGAATTTGAAGAT
GTCAAGCTCTTGAACGACCTTTTGACAGAGAAGAACAAGGAAACAGGATGGGATACTCCA
ATTCATGTTGATGCTGCTAGTGGTGGCTTCATTGCACCATTTTTGTACCCAGAGCTTGAA
TGGGACTTCCGCTTGCCGCTGGTGAAGAGTATTAATGTTAGTGGCCACAAGTACGGGCTT
GTGTATGCTGGTATTGGTTGGGTTGTTTGGAGAAACAAAGAAGACTTGCCTGAAGAACTC
ATCTTCCACATCAATTACCTAGGAGCTGATCAACCCACCTTCACCCTCAATTTTTCTAAA
GGTTCTAGCCAAGTAATTGCTCAGTACTACCAACTAATCCGCTTAGGTTTTGAGGGATAC
CGCAATGTGATGGAGAATTGTCACGAAAATGCAATGGTGCTGAAAGAAGGACTAGAGAAA
ACCGGCCGCTTCAACATTGTGTCAAAGGACGAAGGGGTTCCGTTGGTGGCATTTTCTCTC
AAGGACAACAAACGCCACGATGAATTCGAAGTGGCCGAATTGCTGCGCCGTTTTGGTTGG
ATTGTGCCAGCGTACACCATGCCCGCTGACGCTCAGCACATCACCGTGTTACGTGTCGTC
ATCAGGGAAGACTTCTCTCGCACACTTGCCGAGCGCCTTGTGCTCGACATCACAAAAGTG
CTTCATGAGCTTGATTCGCTTCCTTCAAAAGTGCTTGTACCTGCTTCTGAACAGAATGGA
AGGAATGGAAAGAAGACTGAAATTGAGACTCAGAGGGAAGTCACTACTTACTGGAGGAAA
TTCGTCTCCGAAAGGAAAGCTAATAACAAGAATAAAATTTGTTAA

Peptide Sequence

PEP ID

orange1.1t01622.1
PEP Infomation
Sequence

MVLSKTFSESDESIHSTFASRYVRNSLPRFTMPENSIPKEAAYQIINDELMLDGNPRLNL
ASFVTTWMEPECDKLMMAAINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEDSETAVG
VGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPFDKPNIVTGANVQVCWEKFARYFEVELKE
VKLSEGYYVMDPAKAVEMVDENTICVAAILGSTLNGEFEDVKLLNDLLTEKNKETGWDTP
IHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVVWRNKEDLPEEL
IFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGFEGYRNVMENCHENAMVLKEGLEK
TGRFNIVSKDEGVPLVAFSLKDNKRHDEFEVAELLRRFGWIVPAYTMPADAQHITVLRVV
IREDFSRTLAERLVLDITKVLHELDSLPSKVLVPASEQNGRNGKKTEIETQREVTTYWRK
FVSERKANNKNKIC*

Transcript Sequence

Transcript ID

orange1.1t01622.1
Transcript Infomation

gene=orange1.1t01622 CDS=496-1980
Sequence

ATTATTTGTCAATTCCAGTGGGTTACCTTTTAGCCAAAAGTGGTTAGGAATTAATTAGAA
AATTAAAAGTTGAATAATGCGAGAACTTCAAAAGGCCAAGGTCCACAACAACGACCAGGA
TTAGCTTGACCGTTGATTGATTCTTTGAGGCTTCGACGGTTCCTGATCGCGGGTTGTGCT
GCTAAATCATCGAACACGTTGCATTAACTAAGTCAAAAAATTCAGGCAGTGATTTGTTCT
TTTTTTCTTTTAATTGTCAAAGTCTTTGATTCTCTGGAATATGTATGTAATAGGAAAAAG
AAACTTCTAAGGGCAGGTTCGTTGAGGCTTCCTTAGTCCTTCCTCCTTGCCACACTTTTC
CTTGGCTATATAAAGCAGCCAAGCCCCTTCTCCAAGCAATTCCAAGCTCATACTTCATTA
GCTCTCTGTACTCTCTCTGACACCAAAAGAAAAAAAAAATCATTATTAAATTTTGTTTGT
TTTAATCTTTCAATCATGGTTCTTTCAAAGACATTTTCCGAATCCGATGAGTCAATTCAC
TCCACCTTTGCCTCTCGCTACGTCCGAAACTCTCTTCCTCGGTTCACGATGCCGGAGAAC
TCGATACCGAAGGAGGCGGCGTACCAGATCATAAACGACGAGCTGATGCTCGACGGGAAT
CCAAGATTGAACTTGGCTTCCTTCGTCACAACGTGGATGGAGCCTGAATGTGACAAGCTT
ATGATGGCTGCCATTAACAAGAACTACGTTGACATGGATGAGTATCCTGTCACCACCGAG
CTTCAGAATCGATGTGTGAACATTATAGCCCGACTGTTCAATGCTCCACTGGAGGACTCC
GAGACGGCTGTCGGAGTTGGAACCGTAGGATCATCGGAAGCCATAATGTTGGCCGGCCTT
GCATTCAAAAGAAAGTGGCAGAACAAGCGCAAGGCTGAAGGAAAGCCCTTTGACAAACCC
AACATTGTCACTGGAGCGAACGTTCAGGTCTGCTGGGAGAAATTTGCAAGGTATTTTGAG
GTGGAGTTGAAGGAAGTGAAGCTGTCGGAAGGCTACTACGTGATGGACCCAGCCAAAGCT
GTAGAAATGGTGGATGAAAACACTATCTGTGTTGCTGCTATTCTGGGTTCTACTCTCAAT
GGAGAATTTGAAGATGTCAAGCTCTTGAACGACCTTTTGACAGAGAAGAACAAGGAAACA
GGATGGGATACTCCAATTCATGTTGATGCTGCTAGTGGTGGCTTCATTGCACCATTTTTG
TACCCAGAGCTTGAATGGGACTTCCGCTTGCCGCTGGTGAAGAGTATTAATGTTAGTGGC
CACAAGTACGGGCTTGTGTATGCTGGTATTGGTTGGGTTGTTTGGAGAAACAAAGAAGAC
TTGCCTGAAGAACTCATCTTCCACATCAATTACCTAGGAGCTGATCAACCCACCTTCACC
CTCAATTTTTCTAAAGGTTCTAGCCAAGTAATTGCTCAGTACTACCAACTAATCCGCTTA
GGTTTTGAGGGATACCGCAATGTGATGGAGAATTGTCACGAAAATGCAATGGTGCTGAAA
GAAGGACTAGAGAAAACCGGCCGCTTCAACATTGTGTCAAAGGACGAAGGGGTTCCGTTG
GTGGCATTTTCTCTCAAGGACAACAAACGCCACGATGAATTCGAAGTGGCCGAATTGCTG
CGCCGTTTTGGTTGGATTGTGCCAGCGTACACCATGCCCGCTGACGCTCAGCACATCACC
GTGTTACGTGTCGTCATCAGGGAAGACTTCTCTCGCACACTTGCCGAGCGCCTTGTGCTC
GACATCACAAAAGTGCTTCATGAGCTTGATTCGCTTCCTTCAAAAGTGCTTGTACCTGCT
TCTGAACAGAATGGAAGGAATGGAAAGAAGACTGAAATTGAGACTCAGAGGGAAGTCACT
ACTTACTGGAGGAAATTCGTCTCCGAAAGGAAAGCTAATAACAAGAATAAAATTTGTTAA
GACACACCCCCCCCCCCCCCCC