Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01620.1
CDS Infomation

gene=orange1.1t01620
Sequence

ATGAGACCAATTTTGATGAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACAACAAA
GACGGAGATCTGCTCTTTTCATGTGCCAAGGATCACACACCCACCGTTTGGTTCGCTGAC
AACGGCGAGCGTCTTGGCACATACCGTGGCCACAACGGCGCCGTTTGGTGCTGCGATGTT
TCAAGAGATTCGATGACGCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAAT
GTTGAAACAGGGGCTCAGTTGTTCACATTCAATTTTGATTCTCCAGCTAGGTCTGTCGAC
TTTGCTGTTGGTGATAAGCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAAACTCA
GCCATTCATGTCAAACGCATTGCAAGAGATCCTGCTGATCAGGGTGGTGAATCTGTGCTT
ATTCTAAAAGGCCCTCAGGGAAGAATAAACAGAGCAGTTTGGGGACCGCTAAACAGGACT
ATCATTAGTGCTGGAGAAGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTG
CTTAAAGAGTCGGACAAGGAAACTGGTCATAAAAAGACTATAACATCGCTTGCAAAAGCT
GCTGATGGATCACATTTCCTCACTGGTTCCCTTGATAAATCTGCTAAGCTTTGGGATGCC
AGAACACTGGAGCTTATCAAGACCTATGTGACGGAGCGCCCGGTCAATGCTGTTACTATG
TCTCCACTTCTTGATCATGTGGTCCTTGGAGGTGGTCAAGATGCTTCAGCTGTCACGACA
ACTGATCATCGTGCAGGGAAGTTCGAAGCTAAATTCTTTGACAAGATTCTCCAAGAAGAA
ATTGGAGGTGTTAAAGGACACTTTGGACCTATAAATGCCTTGGCTTTCAACCCTGATGGT
AAAAGTTTCTCAAGTGGAGGTGAAGATGGTTATGTGAGGTTGCACCATTTCGACCCGGAT
TACTTCAACATCAAGATATAA

Peptide Sequence

PEP ID

orange1.1t01620.1
PEP Infomation
Sequence

MRPILMKGHERPLTYLKYNKDGDLLFSCAKDHTPTVWFADNGERLGTYRGHNGAVWCCDV
SRDSMTLITGSADQTAKLWNVETGAQLFTFNFDSPARSVDFAVGDKLAVITTDPFMELNS
AIHVKRIARDPADQGGESVLILKGPQGRINRAVWGPLNRTIISAGEDAIVRIWDTETGKL
LKESDKETGHKKTITSLAKAADGSHFLTGSLDKSAKLWDARTLELIKTYVTERPVNAVTM
SPLLDHVVLGGGQDASAVTTTDHRAGKFEAKFFDKILQEEIGGVKGHFGPINALAFNPDG
KSFSSGGEDGYVRLHHFDPDYFNIKI*

Transcript Sequence

Transcript ID

orange1.1t01620.1
Transcript Infomation

gene=orange1.1t01620 CDS=224-1204
Sequence

CAAGAATTTGGGCCAGGAAAGCTCTATACAAGCCCAACTTGATCCATCGGGCTAGAGTAC
TGTTTCTTGTATTCATAGTTCCCCACCCGAAGGAAAACCCTAATTCTCTGTCATCTCTCC
CACTAGCTTTTCTTTGCGATCCCAAGGCTTTCCAACGCTCCACCGGAAACTCCATTCGTC
GCGGAATTCAGGAAAACAGAGAAAGAAGAAGAAAAAAGCAAGCATGAGACCAATTTTGAT
GAAAGGCCATGAGAGGCCTTTAACATATCTTAAATACAACAAAGACGGAGATCTGCTCTT
TTCATGTGCCAAGGATCACACACCCACCGTTTGGTTCGCTGACAACGGCGAGCGTCTTGG
CACATACCGTGGCCACAACGGCGCCGTTTGGTGCTGCGATGTTTCAAGAGATTCGATGAC
GCTAATAACCGGGAGTGCTGACCAGACGGCGAAGCTATGGAATGTTGAAACAGGGGCTCA
GTTGTTCACATTCAATTTTGATTCTCCAGCTAGGTCTGTCGACTTTGCTGTTGGTGATAA
GCTTGCTGTGATTACTACTGATCCTTTCATGGAATTAAACTCAGCCATTCATGTCAAACG
CATTGCAAGAGATCCTGCTGATCAGGGTGGTGAATCTGTGCTTATTCTAAAAGGCCCTCA
GGGAAGAATAAACAGAGCAGTTTGGGGACCGCTAAACAGGACTATCATTAGTGCTGGAGA
AGATGCTATAGTTCGTATTTGGGATACTGAGACAGGGAAACTGCTTAAAGAGTCGGACAA
GGAAACTGGTCATAAAAAGACTATAACATCGCTTGCAAAAGCTGCTGATGGATCACATTT
CCTCACTGGTTCCCTTGATAAATCTGCTAAGCTTTGGGATGCCAGAACACTGGAGCTTAT
CAAGACCTATGTGACGGAGCGCCCGGTCAATGCTGTTACTATGTCTCCACTTCTTGATCA
TGTGGTCCTTGGAGGTGGTCAAGATGCTTCAGCTGTCACGACAACTGATCATCGTGCAGG
GAAGTTCGAAGCTAAATTCTTTGACAAGATTCTCCAAGAAGAAATTGGAGGTGTTAAAGG
ACACTTTGGACCTATAAATGCCTTGGCTTTCAACCCTGATGGTAAAAGTTTCTCAAGTGG
AGGTGAAGATGGTTATGTGAGGTTGCACCATTTCGACCCGGATTACTTCAACATCAAGAT
ATAATTTTGGCGGATTTGAAGATTTTTTTTTTAATTTTGGCGGATTTGTGGACGTCAATT
TTTATCCATATAAATCAGCCTCTGCTCGACTTCATTTTTGTATGTTTTAGGAATTGCATT
GTATTTGCAATATCAAGGTTTCATTTTCGTGTCATTTTATTATTTTTGTCATCTGTTTGC
AGTTTAATACATAAAAGAGAAGAAAAAAAAATTAAAAAAAAAAAGAAAGATGTTTAAGTC
CACCTGCTATATGTGAGGTTTTAATATTGAAGTGGTGCGTTCATTGTTGGCAAATTTTCC
TTATTGAGTTACTAGTGCCC