Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01270.2
CDS Infomation

gene=orange1.1t01270
Sequence

ATGGACAAGGCTCAAATCCCATTGCCCACTTTCACAATTTTGCTTCTTGTTGTTGTATCA
ATATCACTTATCCATGGAAGCGAAGGAAGCATTGGAGTCAATTATGGCACAGTTGCAAAC
AACCTGCCTCCACCAACTCATGTTGCACATTTCCTGCTAGAATCTACCATCATCAATCGG
GTCAGGCTCTTCGACGCCGACCCGAAAATGATCCGAGCCTTTGCTCACACAGGGATTGCA
GTTACAGTCACCGTCCCTAATGATCAAATCCCCTATTTAACCAAGCTAAACTTTGCTGAG
CAATGGCTCAAAAATAATATCCAACCTTACACTCCCGCCACAAACATTGTCCGCATTTTC
GTTGGCAATGAAATACTATCAACCGCCAGCAAATTGTTAATAGCAAGCCTTGTCCCGGCC
ATGCAAACTCTGCATACAGCGCTTGTTGGTGTATCATTAGACCGTAGAATTCAAGTCTCC
ACGCCTCATTCGTTAGGCATTCTCTCGAGTTCAAGCCCTCCGTCCTCAGGAAAATTTCAC
CAAGGTTACGACATTCATGTCCTTAAACCATTGCTTAGCTTCCTCAGAGCAACCAAATCT
CCTTTCTTGATAAACCCGTATCCGTTTTTTGGATGCTCCCCGGAGACTCTTGATTACGCC
TTGTTTAGGCCTAATTCAGGAGTGTTTGATGAAAACACCAAAATTGTTTACACAAACATG
TTAGATGGGCAACTTGATGCTGTCTTTTCGGCTATGAAACTCCTCGGATTTGACGATGTA
GAGATTGTTATAGCCGAAACTGGATGGCCATCGAAAGGAGATTCATCACAAGTCGGTGTT
GATTCTCAGAGTGCAGCTGACTACAACATGAATCTCATGCGGCACGTAACATCCGGTAAC
GGCACGCCGCTCATGCCTAACCGGACGTTTGAGACTTACATTTTTGCACTTTTCAATGAA
GATCTAAAGCAAGGACCAACATGCGAAAGAAATTTCGGGCTGTTTCATCCCAATATGACC
CCGGTCTACGACGTCGGCATCCTCCGGTCCACGGTAGCCGCTGCCACTGCTGATCATAAT
CACCATGTTACTTGTTGTTTGTTACTACTACTCATTACAATCGGCCTTCTAGTCCCAGTT
GACGTGGCTGTTTAA

Peptide Sequence

PEP ID

orange1.1t01270.2
PEP Infomation
Sequence

MDKAQIPLPTFTILLLVVVSISLIHGSEGSIGVNYGTVANNLPPPTHVAHFLLESTIINR
VRLFDADPKMIRAFAHTGIAVTVTVPNDQIPYLTKLNFAEQWLKNNIQPYTPATNIVRIF
VGNEILSTASKLLIASLVPAMQTLHTALVGVSLDRRIQVSTPHSLGILSSSSPPSSGKFH
QGYDIHVLKPLLSFLRATKSPFLINPYPFFGCSPETLDYALFRPNSGVFDENTKIVYTNM
LDGQLDAVFSAMKLLGFDDVEIVIAETGWPSKGDSSQVGVDSQSAADYNMNLMRHVTSGN
GTPLMPNRTFETYIFALFNEDLKQGPTCERNFGLFHPNMTPVYDVGILRSTVAAATADHN
HHVTCCLLLLLITIGLLVPVDVAV*

Transcript Sequence

Transcript ID

orange1.1t01270.2
Transcript Infomation

gene=orange1.1t01270 CDS=122-1276
Sequence

TAAGTAAGCCTGCATGCTCTCTCCATTCACAAAGAAAAGCATCTAAAATCTCCATTAATT
TCTTCAAGCATACTGCTTCACTAAGTCCTACTCTCAACGCAGCATCTCACTACATCAATC
AATGGACAAGGCTCAAATCCCATTGCCCACTTTCACAATTTTGCTTCTTGTTGTTGTATC
AATATCACTTATCCATGGAAGCGAAGGAAGCATTGGAGTCAATTATGGCACAGTTGCAAA
CAACCTGCCTCCACCAACTCATGTTGCACATTTCCTGCTAGAATCTACCATCATCAATCG
GGTCAGGCTCTTCGACGCCGACCCGAAAATGATCCGAGCCTTTGCTCACACAGGGATTGC
AGTTACAGTCACCGTCCCTAATGATCAAATCCCCTATTTAACCAAGCTAAACTTTGCTGA
GCAATGGCTCAAAAATAATATCCAACCTTACACTCCCGCCACAAACATTGTCCGCATTTT
CGTTGGCAATGAAATACTATCAACCGCCAGCAAATTGTTAATAGCAAGCCTTGTCCCGGC
CATGCAAACTCTGCATACAGCGCTTGTTGGTGTATCATTAGACCGTAGAATTCAAGTCTC
CACGCCTCATTCGTTAGGCATTCTCTCGAGTTCAAGCCCTCCGTCCTCAGGAAAATTTCA
CCAAGGTTACGACATTCATGTCCTTAAACCATTGCTTAGCTTCCTCAGAGCAACCAAATC
TCCTTTCTTGATAAACCCGTATCCGTTTTTTGGATGCTCCCCGGAGACTCTTGATTACGC
CTTGTTTAGGCCTAATTCAGGAGTGTTTGATGAAAACACCAAAATTGTTTACACAAACAT
GTTAGATGGGCAACTTGATGCTGTCTTTTCGGCTATGAAACTCCTCGGATTTGACGATGT
AGAGATTGTTATAGCCGAAACTGGATGGCCATCGAAAGGAGATTCATCACAAGTCGGTGT
TGATTCTCAGAGTGCAGCTGACTACAACATGAATCTCATGCGGCACGTAACATCCGGTAA
CGGCACGCCGCTCATGCCTAACCGGACGTTTGAGACTTACATTTTTGCACTTTTCAATGA
AGATCTAAAGCAAGGACCAACATGCGAAAGAAATTTCGGGCTGTTTCATCCCAATATGAC
CCCGGTCTACGACGTCGGCATCCTCCGGTCCACGGTAGCCGCTGCCACTGCTGATCATAA
TCACCATGTTACTTGTTGTTTGTTACTACTACTCATTACAATCGGCCTTCTAGTCCCAGT
TGACGTGGCTGTTTAAAGGGATAAGTTGTCACATCAACTGGGACTCAAATGCTGGAATCC
TAAGCATTACTCATGATCTTAATTTTATCGATTTGCATTAATGAATTTGATGGACAGGCC
AGATCATCGATCCCCACAAGTAATCCAACGCCAAAAGTGGAAACGCCGCAGCGAGCGCCA
GAGGGGAAACGGTGGTGTGTTCCGAAGACAGGGGCTGACATTGAAGCACTTCAGAGGAAT
ATTGATTATGTTTGCGGAATGGGATTCAACTGTGAAGCGATTCAAGAAGGGGGCTCGTGC
TTTCTCCCTAACACGGTTCGGGCTCACGCAGCATACGCCATGAACGTCTACTACCAAGCA
ATGGGAAGGCACGATTACGCGTGCGATTTCATACAAACTGGAGCTGTCACTGACCTTGAT
CCAAGCTATGGAAAATGCAAGTATTGATTTTGATGGAGGAGATTTGGAATGAGGGGCAGG
GCATCAAGCATCATCAGTTTTTGTAATCTTGTTAATTTAATTTAGAATAAGAACAAGCTG
GAAGTGAAGTTCTTATCTTAGACATAATGAGTTAATTCATGACATCGGAATGTAACGTTG
AGAAAATTAGTTTTAGGCAGGGAGTCTACCACCCATTTACTAC