Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01249.4
CDS Infomation

gene=orange1.1t01249
Sequence

ATGAATTATCTCATTGGAGCTTTCAAACCAGCTTGCAATATTTCAATTACATTTGCTGAT
GGAAAAAATCGCAAGCAGGTAATTTTGAAGTTGATGTGGTTGTGTTTGCGTACTTCTATA
TTTGCTTGCTGTATGAAATCTGTGAAAGTATTGATATTGATTTGCAATGTTCACTCTGCT
GATGGTGATGAGTGTGTTGCAATATGTGTGTATACGAAGGTTCCTCTGAAGAAGGAAAAT
GGCCAAACAATCATGGTCCCACTTTTTCAGAGTCAAGAAAATATTTCTGGGAAGATTTCT
ATAGAACCTGTACTGGGGAAAAAGGTTGAACACAATGGTGTGAAAATTGAACTCCTTGGT
CAGATTGAGATGTACTTTGACAGAGGCAATTTTTATGACTTTACTTCCCTTGTCCGCGAA
TTGGATGTTCCTGGAGAAATATATGAAAGAAAAACATACCCATTTGAATTTTCTACTGTT
GAAATGCCATATGAGACATACAATGGGGTGAATGTAAGGCTAAGGTATCACCTGAAAGAT
GTTATTATTGGCAAGATATATTTCCTTCTTGTGAGGATCAAAATTAAGAATATGGACCTT
GAGATTAGGCGCCGAGAATCAACTGGATCAGGGGCCAATACGCATGTTGAAACTGAGACA
CTAGCTAAATTTGAGTTAATGGATGGTGCTCCTGTCAGAGGTGAATCAATTCCAATCAGA
CTTTTTCTTAGCCCCTATGAGCTGACGCCAACTCATCGTAATATTAACAACAAATTTAGC
GTGAAGTATTATCTGAACCTAGTTCTGGTTGATGAAGAGGACCGTCGGTACTTTAAACAG
CAGGAAATTACCATTTACAGGCTACAGGAAAATTCCTGA

Peptide Sequence

PEP ID

orange1.1t01249.4
PEP Infomation
Sequence

MNYLIGAFKPACNISITFADGKNRKQVILKLMWLCLRTSIFACCMKSVKVLILICNVHSA
DGDECVAICVYTKVPLKKENGQTIMVPLFQSQENISGKISIEPVLGKKVEHNGVKIELLG
QIEMYFDRGNFYDFTSLVRELDVPGEIYERKTYPFEFSTVEMPYETYNGVNVRLRYHLKD
VIIGKIYFLLVRIKIKNMDLEIRRRESTGSGANTHVETETLAKFELMDGAPVRGESIPIR
LFLSPYELTPTHRNINNKFSVKYYLNLVLVDEEDRRYFKQQEITIYRLQENS*

Transcript Sequence

Transcript ID

orange1.1t01249.4
Transcript Infomation

gene=orange1.1t01249 CDS=216-1094
Sequence

AGGAAACCCAGCTAGTAATAGTCTTCGTTGCTGTTGCTTCCTAAGTGTCGTATATTTTAC
ATCGATGAAACTATCAACCGTTCAACCAAATCTCGATTTGCGGGCAAATTAGGCCTTTTT
TTTTCCTCCCTCGATCACTTTTCAATTAACTGCCTAAGGTGTTTTATTTTGCAATTGAAG
AGGGTTTTGTAATCAGCACTAGATTGTGAGCAAACATGAATTATCTCATTGGAGCTTTCA
AACCAGCTTGCAATATTTCAATTACATTTGCTGATGGAAAAAATCGCAAGCAGGTAATTT
TGAAGTTGATGTGGTTGTGTTTGCGTACTTCTATATTTGCTTGCTGTATGAAATCTGTGA
AAGTATTGATATTGATTTGCAATGTTCACTCTGCTGATGGTGATGAGTGTGTTGCAATAT
GTGTGTATACGAAGGTTCCTCTGAAGAAGGAAAATGGCCAAACAATCATGGTCCCACTTT
TTCAGAGTCAAGAAAATATTTCTGGGAAGATTTCTATAGAACCTGTACTGGGGAAAAAGG
TTGAACACAATGGTGTGAAAATTGAACTCCTTGGTCAGATTGAGATGTACTTTGACAGAG
GCAATTTTTATGACTTTACTTCCCTTGTCCGCGAATTGGATGTTCCTGGAGAAATATATG
AAAGAAAAACATACCCATTTGAATTTTCTACTGTTGAAATGCCATATGAGACATACAATG
GGGTGAATGTAAGGCTAAGGTATCACCTGAAAGATGTTATTATTGGCAAGATATATTTCC
TTCTTGTGAGGATCAAAATTAAGAATATGGACCTTGAGATTAGGCGCCGAGAATCAACTG
GATCAGGGGCCAATACGCATGTTGAAACTGAGACACTAGCTAAATTTGAGTTAATGGATG
GTGCTCCTGTCAGAGGTGAATCAATTCCAATCAGACTTTTTCTTAGCCCCTATGAGCTGA
CGCCAACTCATCGTAATATTAACAACAAATTTAGCGTGAAGTATTATCTGAACCTAGTTC
TGGTTGATGAAGAGGACCGTCGGTACTTTAAACAGCAGGAAATTACCATTTACAGGCTAC
AGGAAAATTCCTGATTGATTGTTGCGCAATTAAATTGGCGTTTCAGCTCGTGCGAAGAGA
ATACATAAATGACTAGTTGATAACACTTTGTAAATCCTTAAAGCTTAGGATGCAAATTGC
TTGAATGAGGAGCGTGGTTCATACGGTGGCTTTGTATACTTGCTTGTTCAGTATTGTCAC
GGTTATGCGCACAACTGCAGTTGGGAAAGACCTCTCGTTGAGGTTTCCATGTGATTATTA
CTGATCTCTTATTTCGTAAGGATCTCTGGGAATGCATGCCGTGATCACTTTTCATTCATG
TCGATTGTTTTGGGTTTCTATGTTAACTCTATTCCCTATTGTTGTTTAGGTGATGATTCT
ATAAAATTGTAGGCCCTTTTTTTTTCCTTTACTT