Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01246.2
CDS Infomation

gene=orange1.1t01246
Sequence

ATGGTGAAGAGAATGGGAAATTCTTCAGAGACAAAGTTCTTGCAGGAACTGATATTATAC
GCCGCGAGTGCAGCCCTAAGCTGTTTGGTTCTTTTCGCGGGGCTCCGGCACCTTGACCCG
AACCGTGAAGCCTCCAAGAAAGCCCTTGAACACAAGAAGGAAATTTCCAAACGCTTGGGT
CGTCCTCTCATTCAAACCAATCCTTACGAGGATGTAATAGCGTGTGATGTTATAAATCCG
GACCACATTGATGTGGAATTTGAATCTATTGGGGGATTGGAAACTATCAAGCAAGCTTTG
TATGAATTGGTGATTCTTCCTTTACGAAGGCCGGAGTTGTTTTCTCATGGGAAGCTTCTC
GGTCCCCAGAAAGGAGTTCTGTTGTATGGACCTCCTGGTACCGGAAAGACCATGCTTGCC
AAAGCTATTGCAAAAGAGTCCGGTGCTGTTTTCATTAATGTTAGGATATCAAATTTGATG
AGCAAGTGGTTTGGTGATGCTCAGAAACTCGTGGCTGCTGTATTTAGCTTGGCCTATAAA
CTCCAGCCTGCTATTATATTTATTGATGAGGTTGACAGCTTTTTGGGTCAGCGTCGTACT
TCAGACCATGAAGCATTGACAAATATGAAGACTGAGTTTATGGCTTTATGGGATGGGTTT
ACAACAGATCAAAATGCCCGTGTGATGGTTCTTGCGGCAACTAATCGTCCGTCAGAACTT
GATGAAGCAATACTTCGGCGTCTCCCTCAAGCCTTTGAAATTGGGATGCCAGACCGCAAG
GAGAGGGCTCAGATACTGAAGGTGATTTTAAAGGGTGAGAAGGTCGAAGAGAACATAGAC
TTTGACTATTTAGCCGGTTTGTGTGAGGGATTCACGGGTTCAGACCTTCTTGAAGTTTGC
AAGCAAGCAGCCTACTTTTCTATTAGGGAACTACTAGATGAGGAACGCAAGGGGAAACCA
GCAGCTGCTCCAAGGCCACTTTCACGGTTAGATTTGGAGAAAGTTCTTACCACATCTAGA
AAGACGAGGGTTGCTGCAACTGAATATACATTAAACTCACAGTCATCAGGATGGTCAAGG
AATAATGAGTCCAATGATTATCAGGTTCAAGCTGCTATCAGTGAGCTCTCTAGGCTTGTG
GTTTCCCAAATAATGAATATTCAATCAGAACCAGATACACAGGACCCTTGA

Peptide Sequence

PEP ID

orange1.1t01246.2
PEP Infomation
Sequence

MVKRMGNSSETKFLQELILYAASAALSCLVLFAGLRHLDPNREASKKALEHKKEISKRLG
RPLIQTNPYEDVIACDVINPDHIDVEFESIGGLETIKQALYELVILPLRRPELFSHGKLL
GPQKGVLLYGPPGTGKTMLAKAIAKESGAVFINVRISNLMSKWFGDAQKLVAAVFSLAYK
LQPAIIFIDEVDSFLGQRRTSDHEALTNMKTEFMALWDGFTTDQNARVMVLAATNRPSEL
DEAILRRLPQAFEIGMPDRKERAQILKVILKGEKVEENIDFDYLAGLCEGFTGSDLLEVC
KQAAYFSIRELLDEERKGKPAAAPRPLSRLDLEKVLTTSRKTRVAATEYTLNSQSSGWSR
NNESNDYQVQAAISELSRLVVSQIMNIQSEPDTQDP*

Transcript Sequence

Transcript ID

orange1.1t01246.2
Transcript Infomation

gene=orange1.1t01246 CDS=142-1332
Sequence

CATCTTCTTCTTCTTTCTTCTTCACATAAATTTCAAACCCTAATTCATTTCTTCACTTGC
AGAGATATTATTAACGAGAAACTTCCAAATTAATAATAAAAGTGATAGTAATATTGTTGT
TGTTATTATTATTAGTATTTCATGGTGAAGAGAATGGGAAATTCTTCAGAGACAAAGTTC
TTGCAGGAACTGATATTATACGCCGCGAGTGCAGCCCTAAGCTGTTTGGTTCTTTTCGCG
GGGCTCCGGCACCTTGACCCGAACCGTGAAGCCTCCAAGAAAGCCCTTGAACACAAGAAG
GAAATTTCCAAACGCTTGGGTCGTCCTCTCATTCAAACCAATCCTTACGAGGATGTAATA
GCGTGTGATGTTATAAATCCGGACCACATTGATGTGGAATTTGAATCTATTGGGGGATTG
GAAACTATCAAGCAAGCTTTGTATGAATTGGTGATTCTTCCTTTACGAAGGCCGGAGTTG
TTTTCTCATGGGAAGCTTCTCGGTCCCCAGAAAGGAGTTCTGTTGTATGGACCTCCTGGT
ACCGGAAAGACCATGCTTGCCAAAGCTATTGCAAAAGAGTCCGGTGCTGTTTTCATTAAT
GTTAGGATATCAAATTTGATGAGCAAGTGGTTTGGTGATGCTCAGAAACTCGTGGCTGCT
GTATTTAGCTTGGCCTATAAACTCCAGCCTGCTATTATATTTATTGATGAGGTTGACAGC
TTTTTGGGTCAGCGTCGTACTTCAGACCATGAAGCATTGACAAATATGAAGACTGAGTTT
ATGGCTTTATGGGATGGGTTTACAACAGATCAAAATGCCCGTGTGATGGTTCTTGCGGCA
ACTAATCGTCCGTCAGAACTTGATGAAGCAATACTTCGGCGTCTCCCTCAAGCCTTTGAA
ATTGGGATGCCAGACCGCAAGGAGAGGGCTCAGATACTGAAGGTGATTTTAAAGGGTGAG
AAGGTCGAAGAGAACATAGACTTTGACTATTTAGCCGGTTTGTGTGAGGGATTCACGGGT
TCAGACCTTCTTGAAGTTTGCAAGCAAGCAGCCTACTTTTCTATTAGGGAACTACTAGAT
GAGGAACGCAAGGGGAAACCAGCAGCTGCTCCAAGGCCACTTTCACGGTTAGATTTGGAG
AAAGTTCTTACCACATCTAGAAAGACGAGGGTTGCTGCAACTGAATATACATTAAACTCA
CAGTCATCAGGATGGTCAAGGAATAATGAGTCCAATGATTATCAGGTTCAAGCTGCTATC
AGTGAGCTCTCTAGGCTTGTGGTTTCCCAAATAATGAATATTCAATCAGAACCAGATACA
CAGGACCCTTGAGATTTATCATCTGTGCCCCAGCTTCCCTGAGACAATATTCTGTTTTGT
AATATTATGCCTAGAAAATCTATTCTATTCTACTTTTTATCATTTCTGAAGTACTTGTTT
ATTGATGTCCTACAAATAGATTATACTGTCCTTTCTAGGCAGCCGTCTACTTGGGCTATG
ATTTTTGGGCCACTTACATATTCTTGACTGCACAAGAACTTCCATTCCAATGCTTGCTTG
TTGCATTCTGCTCCCAATATATACCACACTATATAGCTCATAATGATGTGATGGAAGCAG
TTTTGTGAGTCAAAAATTTATGTTCTTTTAGACTTGGATTGTTGTACAGCTTTTTCATTT
TCTTTTGGATAGAATTTTAGAATTTTAATTGAAACAACCTTTTGCTTATTGCTTCGCCCT
TTTTAGTTTCACCCTCAACTCCACATTGTCTGATAGATATTTTGTGTCGGTGTTGTCTGA
ATTTCACAGCATTGATCTCAAATTGTAAACTTCTGTTGTGGATCTGAGGTTCTGTTGTTC
AGTGATGATCAAGATGGAAGACACGGGATGTTAGGAAGGTACAACTGCATTGGTGTTCCA
TAGCTGAGTACTTGTATTTAAGATGGAAGGTAATAATTT