Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01145.3
CDS Infomation

gene=orange1.1t01145
Sequence

ATGCCGTCTACGGATAATCAGGGTTCTTCCTCACCATTTCACTCATTTGGTCGCTCAATT
TGGAGTATTAGGCGCGAACAGGTTCATTCTGTAGAAGGGCATCATGATTCCAGTGCTGAG
GAGTTGGAGCTTGAATCCTTCCATAGACAGATTGCAGACCATTTTAATGCGCTATCAGCT
GTTGCTGATGATGAACTGCTCTCTATTGCATGGATACAAAAGCTTTTATATGCATTTGTT
TGCTGCCAGGAGGAATTCAGGGCTATTTTGTTGAAAGACAAAGCACTAGTGTTGAAACCA
CCACTGGATCGATTTGTTGCTGAATTTTTTGAAAGAAGTTTGAAGGCGCTTGATACGTTT
AATGCAACTCGTGATGGAATCGAAAAGATTCGATTGTGGCAAAAGCATTTGGAGATTGTT
CAATGTGCCCTGGATTCTCATAAGAGGACAATCAGTGAAGGTCAGTCCCGTCGAGCAAGA
AAAGCTTTGATGGATTTGGCTCTCACAATGCTTGATGAGAAGGATTCTGGGTCAGTATTT
TCACAAAGAAATCGGTCCTTTGGTCGCCATAACACCAGTAAAGATCACCATCATCGCTTG
CCAGGGCATTCTCGTTCTCTCTCGTGGAGTGTTTCTCGATCTTGGTCAGCTGCTAAGCAA
CTCCAGTCAATTGCTAACAGTTTGGCACCACCTCGTGGAAATGACATTGCAGCTACAAAT
GGGCTTGTGGTCTCTGTTTTTGCAATGAGTTCTGTACTCTTGTTTGTATTGTGGACTCTT
GTTGCTGCAATCCCTTGTCAGGATAGAGGCTTAAATGTACATTTTTCAATTCCGCGTCAA
TTCTCATGGGGCGTTCCGCTCTTATCACTCCATGAGCGCATTACAGAGGAATCTAAGAAG
CGAGAGCGACGAAATTCCAATGGGCTACTATATGAAATTTATTTGATTGACAAATGTGCT
CGGCAATTGACGGACTTGTTGGATGTGGCTCAGTTTCCGCTGCCAGAGGAGCAAAAAATT
GAACTCGAACATGGAATTCAGGAGTTAACATTGGTTTGTGAAGTGTTGAAGAACGAATTG
GATCCACTGGAACGTCAACTGAGGGAAGTGTTTCGCAGTATCATGAATATGAGAACTGAG
GGTCTTGAATTCTTGGGTAGTGGAAGCGAGTAA

Peptide Sequence

PEP ID

orange1.1t01145.3
PEP Infomation
Sequence

MPSTDNQGSSSPFHSFGRSIWSIRREQVHSVEGHHDSSAEELELESFHRQIADHFNALSA
VADDELLSIAWIQKLLYAFVCCQEEFRAILLKDKALVLKPPLDRFVAEFFERSLKALDTF
NATRDGIEKIRLWQKHLEIVQCALDSHKRTISEGQSRRARKALMDLALTMLDEKDSGSVF
SQRNRSFGRHNTSKDHHHRLPGHSRSLSWSVSRSWSAAKQLQSIANSLAPPRGNDIAATN
GLVVSVFAMSSVLLFVLWTLVAAIPCQDRGLNVHFSIPRQFSWGVPLLSLHERITEESKK
RERRNSNGLLYEIYLIDKCARQLTDLLDVAQFPLPEEQKIELEHGIQELTLVCEVLKNEL
DPLERQLREVFRSIMNMRTEGLEFLGSGSE*

Transcript Sequence

Transcript ID

orange1.1t01145.3
Transcript Infomation

gene=orange1.1t01145 CDS=181-1353
Sequence

CTTGTGGGTCTGCCAGTAGTCTCTTACCAAGGCGATGGGCTATCAAGTCCTCAGCTGAGG
GTTTCTCAATTCGAGATCCACCATTTTACTTGGATTTTGCTCTCTCTCTATCTGCTCTGC
ATATGTAGCTCTTGTGAATCTTTGGAGTATTCTTAAGAGGTCTATCTAGGAGTTGTCACA
ATGCCGTCTACGGATAATCAGGGTTCTTCCTCACCATTTCACTCATTTGGTCGCTCAATT
TGGAGTATTAGGCGCGAACAGGTTCATTCTGTAGAAGGGCATCATGATTCCAGTGCTGAG
GAGTTGGAGCTTGAATCCTTCCATAGACAGATTGCAGACCATTTTAATGCGCTATCAGCT
GTTGCTGATGATGAACTGCTCTCTATTGCATGGATACAAAAGCTTTTATATGCATTTGTT
TGCTGCCAGGAGGAATTCAGGGCTATTTTGTTGAAAGACAAAGCACTAGTGTTGAAACCA
CCACTGGATCGATTTGTTGCTGAATTTTTTGAAAGAAGTTTGAAGGCGCTTGATACGTTT
AATGCAACTCGTGATGGAATCGAAAAGATTCGATTGTGGCAAAAGCATTTGGAGATTGTT
CAATGTGCCCTGGATTCTCATAAGAGGACAATCAGTGAAGGTCAGTCCCGTCGAGCAAGA
AAAGCTTTGATGGATTTGGCTCTCACAATGCTTGATGAGAAGGATTCTGGGTCAGTATTT
TCACAAAGAAATCGGTCCTTTGGTCGCCATAACACCAGTAAAGATCACCATCATCGCTTG
CCAGGGCATTCTCGTTCTCTCTCGTGGAGTGTTTCTCGATCTTGGTCAGCTGCTAAGCAA
CTCCAGTCAATTGCTAACAGTTTGGCACCACCTCGTGGAAATGACATTGCAGCTACAAAT
GGGCTTGTGGTCTCTGTTTTTGCAATGAGTTCTGTACTCTTGTTTGTATTGTGGACTCTT
GTTGCTGCAATCCCTTGTCAGGATAGAGGCTTAAATGTACATTTTTCAATTCCGCGTCAA
TTCTCATGGGGCGTTCCGCTCTTATCACTCCATGAGCGCATTACAGAGGAATCTAAGAAG
CGAGAGCGACGAAATTCCAATGGGCTACTATATGAAATTTATTTGATTGACAAATGTGCT
CGGCAATTGACGGACTTGTTGGATGTGGCTCAGTTTCCGCTGCCAGAGGAGCAAAAAATT
GAACTCGAACATGGAATTCAGGAGTTAACATTGGTTTGTGAAGTGTTGAAGAACGAATTG
GATCCACTGGAACGTCAACTGAGGGAAGTGTTTCGCAGTATCATGAATATGAGAACTGAG
GGTCTTGAATTCTTGGGTAGTGGAAGCGAGTAATTTAGTGGAAAGGAGTAATTTAAGAAG
TAACTTGCTAGTGAGCATCAAGTGTACAAATTTGTGACAGTTGTTGCTAGCCATTTGCAA
GCAGGATGACTGACTGGAGATGGTTGGCAACAATAAAATTTGAACAGGTAGCTTTCTTGT
ATTTATTTTTGTATTTTCTGTAAAGAACATAGTATCTGTATTGTAAGTTGCTTTTTCCGG
TTTTATTTCTTATCCTTTTATTGGTTTCTTTTCTCTTATAGTTTCCATGCTTGGAAACTC
AGATGTTACAGTTTCAAGTCAATTTCTGTGTGGCACCATATATGTTTCAGAACACTTGTT
CACCAGAGTTTGGACATATCTGGACAGATCTTGGCTAATACATGATTAGTTAATATATTC
TGATTGTCTAGTTTGTTTTGCTTTGGTTATGAGATATGATTCCACTTTAGCTGTTCTGAT
GATGTAATTTAAATGAAGCTGATATGAGTGTGCTAGAAGTGTTTCACGCTCTGCGGATCA
ATGAAACTCGGCTAGATCCTTAGCTTTGCCTGAAGAAAGGAACAAGGCTACGCAATGACT
GTACAAAGCATAACCAAGAAGGATTACTGTTAAAATGTTATTATCGCCAGTTTCATAAGG
AAATGGCGATAAATCTCCATCAATAAACAGCTCTTAGCTCCCA