Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t01089.3
CDS Infomation

gene=orange1.1t01089
Sequence

ATGACAATGGAGTATGAGAGCAACAGTTGGATTTGGGATGGGTTGTATTACTACCCACAT
TTCTTTGGAGGTCTAATGCTCACGGCAGCCTTGCTAGGCGTGTCCACCAGTTATTTTGGA
GGAATTGGAGTCTTTTCATTGCCCCATTTGTGGTCTGATTGCTTCCATAAAAAGAAATGC
GGAAAGAAGAAACGTGTGCGGGTTTATATGGATGGCTGCTTTGACCTTATGCATTATGGA
CATGCCAATGCACTGAGGCAGGCTAAGGCGTTGGGAGATGAGCTGGTGGTCGGTGTGGTC
AGTGATGAGGAGATCATTGCTAATAAGGGCCCCCCCGTCTTATCAATGGAGGAGAGGCTG
GCCCTTGTTAGTGGATTAAAGTGGGTGGATGAAGTTATAGCCAATGCTCCTTATGCCATT
ACTGAGCAGTTCATGAACCGTCTCTTCAACGAGCACAAGATTGACTATATTATTCATGGT
GATGATCCGTGCCTGCTTCCAGATGGAACTGATGCTTATGCCTTGGCAAAGAAAGTTGGC
CGTTACAAGCAGATTAAGCGCACAGAAGGTGTCTCCAGCACAGATATTGTAGGGAGGATA
CTTTCGTCAATGGAGGATACAAAAGCTTGTGAAGATCATAATAATGCATCCTTGCCAAGA
GATCCTCTTAGAGCAATTCAATCTAAGGATGCCCATTTATCTCAATTTCTACCAACATCA
CGAAGGATTGTGCAGTTTTCAAATTGCAAGGGACCTGGTCCAAATGCTCGTGTTGTGTAC
ATTGATGGGGCATTTGATCTCTTCCATGCAGGACATGTTGAGATTCTCAAGAAGGCTAGG
CAGCTTGGAGACTTTCTTTTAGTTGGCATTTACACTGACCAGATAGTGAGTGAGCACAGA
GGGAGCTACCACCCAATTATGCATCTACATGAGCGTAGTCTTAGTGTGTTGGCATGTCGT
TATGTTGATGAAGTCATAATTGGTGCACCTTGGGAGGTTACTAAGGACATGATAACCACT
TTCAACATCTGTTTGGTTGTGCATGGGACAGTTTCAGAGACCAACACTCCATTGACTGGT
CAAAGCGATCCTTATGAAGTTGCCAAAAGCATGGGAATTTTCCAGTTACTTGAAAGTCCT
AAAAGTATAACCACCACATCAGTGGCCCAAAGGATAATTGCCAATCACGAGGCCTACATG
AAACGCAATGCGAAGAAAGCAGTGAGTGAGAAGAAGTATTACGAACAGAAGATGTTTGTA
TCAGGAGATTAG

Peptide Sequence

PEP ID

orange1.1t01089.3
PEP Infomation
Sequence

MTMEYESNSWIWDGLYYYPHFFGGLMLTAALLGVSTSYFGGIGVFSLPHLWSDCFHKKKC
GKKKRVRVYMDGCFDLMHYGHANALRQAKALGDELVVGVVSDEEIIANKGPPVLSMEERL
ALVSGLKWVDEVIANAPYAITEQFMNRLFNEHKIDYIIHGDDPCLLPDGTDAYALAKKVG
RYKQIKRTEGVSSTDIVGRILSSMEDTKACEDHNNASLPRDPLRAIQSKDAHLSQFLPTS
RRIVQFSNCKGPGPNARVVYIDGAFDLFHAGHVEILKKARQLGDFLLVGIYTDQIVSEHR
GSYHPIMHLHERSLSVLACRYVDEVIIGAPWEVTKDMITTFNICLVVHGTVSETNTPLTG
QSDPYEVAKSMGIFQLLESPKSITTTSVAQRIIANHEAYMKRNAKKAVSEKKYYEQKMFV
SGD*

Transcript Sequence

Transcript ID

orange1.1t01089.3
Transcript Infomation

gene=orange1.1t01089 CDS=207-1478
Sequence

TTTCAACAAAGAAAAAAAATCAAAACAAAAAGAGAAGGAACGTTTGATTAAGACAGCTCC
TTTTCTCTGAAAAATCCGTGTGGGGGGGCTTTCAAGGAGAAGAAAGAGGAGACACCAAAG
CACCAACCAAAGCTATATATATTCAGAATCTGTGTCTCCTCTAAATTGAGCTACGGAGAT
CTCTGTAGAAAGAAAGAGGCGGCACAATGACAATGGAGTATGAGAGCAACAGTTGGATTT
GGGATGGGTTGTATTACTACCCACATTTCTTTGGAGGTCTAATGCTCACGGCAGCCTTGC
TAGGCGTGTCCACCAGTTATTTTGGAGGAATTGGAGTCTTTTCATTGCCCCATTTGTGGT
CTGATTGCTTCCATAAAAAGAAATGCGGAAAGAAGAAACGTGTGCGGGTTTATATGGATG
GCTGCTTTGACCTTATGCATTATGGACATGCCAATGCACTGAGGCAGGCTAAGGCGTTGG
GAGATGAGCTGGTGGTCGGTGTGGTCAGTGATGAGGAGATCATTGCTAATAAGGGCCCCC
CCGTCTTATCAATGGAGGAGAGGCTGGCCCTTGTTAGTGGATTAAAGTGGGTGGATGAAG
TTATAGCCAATGCTCCTTATGCCATTACTGAGCAGTTCATGAACCGTCTCTTCAACGAGC
ACAAGATTGACTATATTATTCATGGTGATGATCCGTGCCTGCTTCCAGATGGAACTGATG
CTTATGCCTTGGCAAAGAAAGTTGGCCGTTACAAGCAGATTAAGCGCACAGAAGGTGTCT
CCAGCACAGATATTGTAGGGAGGATACTTTCGTCAATGGAGGATACAAAAGCTTGTGAAG
ATCATAATAATGCATCCTTGCCAAGAGATCCTCTTAGAGCAATTCAATCTAAGGATGCCC
ATTTATCTCAATTTCTACCAACATCACGAAGGATTGTGCAGTTTTCAAATTGCAAGGGAC
CTGGTCCAAATGCTCGTGTTGTGTACATTGATGGGGCATTTGATCTCTTCCATGCAGGAC
ATGTTGAGATTCTCAAGAAGGCTAGGCAGCTTGGAGACTTTCTTTTAGTTGGCATTTACA
CTGACCAGATAGTGAGTGAGCACAGAGGGAGCTACCACCCAATTATGCATCTACATGAGC
GTAGTCTTAGTGTGTTGGCATGTCGTTATGTTGATGAAGTCATAATTGGTGCACCTTGGG
AGGTTACTAAGGACATGATAACCACTTTCAACATCTGTTTGGTTGTGCATGGGACAGTTT
CAGAGACCAACACTCCATTGACTGGTCAAAGCGATCCTTATGAAGTTGCCAAAAGCATGG
GAATTTTCCAGTTACTTGAAAGTCCTAAAAGTATAACCACCACATCAGTGGCCCAAAGGA
TAATTGCCAATCACGAGGCCTACATGAAACGCAATGCGAAGAAAGCAGTGAGTGAGAAGA
AGTATTACGAACAGAAGATGTTTGTATCAGGAGATTAGGAGGAATAGAAATTTTATAGCA
AGTTTGGTACAGTTCATCCGCAGCCTTGCCGTATCATAGGGCTGCCTGTTGTTGTTCAAG
ATTTAGTAAAAGTCCTGCACTTGCCTTTTGTGGAAGCAGAGATGAAGAACGCCATGCCAT
AGGACACCCCCGCCCTCATCAGAGACTAGGATGAGCTGCATGCTTTTTACTATTTGCCCA
CATTGTAACTTTATTCATAGTAGATTGAAACCTTTACTAACAAGTCCAATGAGTATCGAG
TTTGAGTGCTAGTAAGTTATTGAATCATCTTCTAGCAAATCCTTTTTTTTTTTTTTTAAT
TAATCTTGTTAAACACAAATGTGCATCATTTTTTGGGGTCCCGATTGCTTAGTAATTGAT
GGGTAATTAAT