Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00878.1
CDS Infomation

gene=orange1.1t00878
Sequence

ATGGGAATTCTGTACGACGACGTTGTGATCATCAGCCAATCAGACAAAGAAGGTGACCCA
TGTGTGATAACAGTCAACTGCCCTGATAAAACTGGTCTTGGTTGTGATTTGTGTCGCATC
ATTCTCTTCTTTGGTCTTAGCATTGTCAGAGGAGATGTATCTACGGATGGGAAATGGTGC
TACATAGTGTTTTGGGTGATTGGGGACTCACAAACAAGGTGGGGTTTATTGAAGAAGAGA
CTGATGGGTGCATGCCCTTCTTGTTCTTCAGCTTCTGTGGTTCTTTACTACCGCGCAGAA
ATGCAAGCACCCAAACCTTCTGATGTTTTTCTCTTGAAGCTTTCTTGTTATGATCGAAAA
GGCCTTCTATATGATGTTACCGCGGTTCTCTGTGAGCTTGAGCTTACCATAGAGAAAGTG
AAAATATCTACTACTCCAGATGGGAAAGTGATGGACCTTTTCTTTGTCACAGACACAAGA
GAACTTCTACATACAAGGAAGAGAAAGGAGGATACATACGAGCACTTAAAAACCATTTTG
GGGAATGCAATGATAAGCTGTGATGTAGAAATGGTAGGCACAGAAATTACTGCCTGCTCG
CAGGCATCTTCATTTCTTCCATCTGCAATCATTGACATGCTCCATTTAGATATGCCTGTT
GAACTCCCAAGTGGATCGCTCACTTGCAGCAATGTCTCTGTCACAATAGACAACTCGCTG
AGTCCTGGTCATACTCTTGTCCAAATTGTCTGCCAAGACCACAAAGGTCTCCTTTACGAC
ATAATGAGAACTCTAAAGGATTACAATATTCAGGTTTCATATGGACGCTTCTCTAGAAGA
CAAAGAGGAAACTGTGAGATTGACTTGTTTATCATGCAAGCTGATGGGAAAAAGATAGTT
GACCCTAGCAAGCAGAATGGGCTATCCTCTCGACTGTGGATGGAACTGCTTCAGCCTCTC
AGAGTAACTGTGGTCAGCAGGGGTCCTGATACAGAGCTTCTGGTTGCAAATCCTGTGGAA
TTATCTGGCAAGGGTAGACCTCTTGTTTTTCACGATATCACCCTTGCTCTCAAGATGCTT
GATATTTGCATCTTTTCGGCTGAGATTGGAAGGCACATGATTGGAGATAGGGAATGGGAA
GTTTACAGAGTCCTACTTGATGAAGGGGATGGATTGTCTGTCCCAAGAAATAAGATTGAG
GAAGGAGTTTGGAAATTGTTGATGGGTTGGGAATGA

Peptide Sequence

PEP ID

orange1.1t00878.1
PEP Infomation
Sequence

MGILYDDVVIISQSDKEGDPCVITVNCPDKTGLGCDLCRIILFFGLSIVRGDVSTDGKWC
YIVFWVIGDSQTRWGLLKKRLMGACPSCSSASVVLYYRAEMQAPKPSDVFLLKLSCYDRK
GLLYDVTAVLCELELTIEKVKISTTPDGKVMDLFFVTDTRELLHTRKRKEDTYEHLKTIL
GNAMISCDVEMVGTEITACSQASSFLPSAIIDMLHLDMPVELPSGSLTCSNVSVTIDNSL
SPGHTLVQIVCQDHKGLLYDIMRTLKDYNIQVSYGRFSRRQRGNCEIDLFIMQADGKKIV
DPSKQNGLSSRLWMELLQPLRVTVVSRGPDTELLVANPVELSGKGRPLVFHDITLALKML
DICIFSAEIGRHMIGDREWEVYRVLLDEGDGLSVPRNKIEEGVWKLLMGWE*

Transcript Sequence

Transcript ID

orange1.1t00878.1
Transcript Infomation

gene=orange1.1t00878 CDS=1-1236
Sequence

ATGGGAATTCTGTACGACGACGTTGTGATCATCAGCCAATCAGACAAAGAAGGTGACCCA
TGTGTGATAACAGTCAACTGCCCTGATAAAACTGGTCTTGGTTGTGATTTGTGTCGCATC
ATTCTCTTCTTTGGTCTTAGCATTGTCAGAGGAGATGTATCTACGGATGGGAAATGGTGC
TACATAGTGTTTTGGGTGATTGGGGACTCACAAACAAGGTGGGGTTTATTGAAGAAGAGA
CTGATGGGTGCATGCCCTTCTTGTTCTTCAGCTTCTGTGGTTCTTTACTACCGCGCAGAA
ATGCAAGCACCCAAACCTTCTGATGTTTTTCTCTTGAAGCTTTCTTGTTATGATCGAAAA
GGCCTTCTATATGATGTTACCGCGGTTCTCTGTGAGCTTGAGCTTACCATAGAGAAAGTG
AAAATATCTACTACTCCAGATGGGAAAGTGATGGACCTTTTCTTTGTCACAGACACAAGA
GAACTTCTACATACAAGGAAGAGAAAGGAGGATACATACGAGCACTTAAAAACCATTTTG
GGGAATGCAATGATAAGCTGTGATGTAGAAATGGTAGGCACAGAAATTACTGCCTGCTCG
CAGGCATCTTCATTTCTTCCATCTGCAATCATTGACATGCTCCATTTAGATATGCCTGTT
GAACTCCCAAGTGGATCGCTCACTTGCAGCAATGTCTCTGTCACAATAGACAACTCGCTG
AGTCCTGGTCATACTCTTGTCCAAATTGTCTGCCAAGACCACAAAGGTCTCCTTTACGAC
ATAATGAGAACTCTAAAGGATTACAATATTCAGGTTTCATATGGACGCTTCTCTAGAAGA
CAAAGAGGAAACTGTGAGATTGACTTGTTTATCATGCAAGCTGATGGGAAAAAGATAGTT
GACCCTAGCAAGCAGAATGGGCTATCCTCTCGACTGTGGATGGAACTGCTTCAGCCTCTC
AGAGTAACTGTGGTCAGCAGGGGTCCTGATACAGAGCTTCTGGTTGCAAATCCTGTGGAA
TTATCTGGCAAGGGTAGACCTCTTGTTTTTCACGATATCACCCTTGCTCTCAAGATGCTT
GATATTTGCATCTTTTCGGCTGAGATTGGAAGGCACATGATTGGAGATAGGGAATGGGAA
GTTTACAGAGTCCTACTTGATGAAGGGGATGGATTGTCTGTCCCAAGAAATAAGATTGAG
GAAGGAGTTTGGAAATTGTTGATGGGTTGGGAATGA