Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00622.2
CDS Infomation

gene=orange1.1t00622
Sequence

ATGGCGACGTACGATTTGACGCAGAGAATCGCTCCGAATCTGGACCGGCATCTGGTGTTT
CCGCTGCTGGAGTTTCTTCAAGAGCGGCAGATGTACCCGGACGAGCAGATTTTGAAATCG
AAGATAGAGCTCTTGAACAAGACGAACATGGTCGACTACGCGATGGACATCCACAAGAGC
CTCTACCACACCGAAGACGTCCCGCAGGATATGGTCGAGCGGAGGGTCGAGGTCGTCGCT
CGGTTGAAGGCCCTGGAGGAGCGCGCCGCCCCGATCGTTTCGTTCTTGCAGAACCCTAAC
TCCTTTCAAGATTTGAGAGCTAATGACCAGCACTACAATTTGCAGATGCTTCACGACCGT
TACCAGATTGGCCCGGACCAGATCGAGGCGCTTTATCAGTATGCCAAATTTCAGTTTGAA
TGTGGGAACTACTCTGGGGCTGCTGACTATCTGTACCAGTACAGGGCCTTGTGCACAAAC
AGTGAAAGGAGGCTGAGTGCATTATGGGGAAAAATGGCGGCTGAGATATTGATGCAGAAT
TGGGATATTGCTCTTGAAGAACTTAATCAATTAAAGGAAAAAGTTGATGACCCAAAGAGT
TTCACATCACCTTTAAATCAGATGCAAAGTAGGATATGGTTAATGCATTGGAGTCTCTTC
ATCTTTTTCAATCATGATAATGGAAGAACACTGATCATTGACTTGTTCAATCAGGATAAG
TATCTAAATGCCATTCAAACCAATGCTCCCCATCTTTTACGCTATTTAGCTACTGCATTC
ATTGTCAACAAAAGGAGGAGACCTCAATTCAAAGATTTTATTAAGGTTATCCAGCAAGAG
CAAAACTCGTACAAAGATCCCATTACAGAGTTTTTGGCATGTGTGTACGTCAATTATGAC
TTTGATGGGGCACAGAAGAAGATGAAGGAGTGTGAAGAAGTGATATTGAATGATCCTTTC
CTTGGCAAACGAGTTGAAGATAGCAACTTTGCTACTGTTCCTTTGAGAGATGAGTTCCTC
GAAAATGCTCGGCTATTCATCTTTGAGACCTATTGTCGAATTCATCAACGCATTGATATG
GCAGTGCTTGCTGAGAAGTTGAATCTAAATTATGAGGAAGCTCAAAGATGGATTGTGAAT
CTTATTCGGAACTCAAAACTTGATGCCAAGATTGATGCAAAGTCGGGAACTGTTATCATG
GAACCCACCCACCCCAACGTGTAA

Peptide Sequence

PEP ID

orange1.1t00622.2
PEP Infomation
Sequence

MATYDLTQRIAPNLDRHLVFPLLEFLQERQMYPDEQILKSKIELLNKTNMVDYAMDIHKS
LYHTEDVPQDMVERRVEVVARLKALEERAAPIVSFLQNPNSFQDLRANDQHYNLQMLHDR
YQIGPDQIEALYQYAKFQFECGNYSGAADYLYQYRALCTNSERRLSALWGKMAAEILMQN
WDIALEELNQLKEKVDDPKSFTSPLNQMQSRIWLMHWSLFIFFNHDNGRTLIIDLFNQDK
YLNAIQTNAPHLLRYLATAFIVNKRRRPQFKDFIKVIQQEQNSYKDPITEFLACVYVNYD
FDGAQKKMKECEEVILNDPFLGKRVEDSNFATVPLRDEFLENARLFIFETYCRIHQRIDM
AVLAEKLNLNYEEAQRWIVNLIRNSKLDAKIDAKSGTVIMEPTHPNV*

Transcript Sequence

Transcript ID

orange1.1t00622.2
Transcript Infomation

gene=orange1.1t00622 CDS=167-1390
Sequence

GTACGTACATACATATATATATATAAATATAAATAAAAAATCAACAAAAGCTAACCTAGA
AACAAAACCTAAAAGCCCAACGCTCATCCTCAGTTTGCTCTTCGTCTACAGCAGAACAGT
AGCAGCAGACGCCGCTGCCGCCGACGAACAAAATTTGAACGCGACAATGGCGACGTACGA
TTTGACGCAGAGAATCGCTCCGAATCTGGACCGGCATCTGGTGTTTCCGCTGCTGGAGTT
TCTTCAAGAGCGGCAGATGTACCCGGACGAGCAGATTTTGAAATCGAAGATAGAGCTCTT
GAACAAGACGAACATGGTCGACTACGCGATGGACATCCACAAGAGCCTCTACCACACCGA
AGACGTCCCGCAGGATATGGTCGAGCGGAGGGTCGAGGTCGTCGCTCGGTTGAAGGCCCT
GGAGGAGCGCGCCGCCCCGATCGTTTCGTTCTTGCAGAACCCTAACTCCTTTCAAGATTT
GAGAGCTAATGACCAGCACTACAATTTGCAGATGCTTCACGACCGTTACCAGATTGGCCC
GGACCAGATCGAGGCGCTTTATCAGTATGCCAAATTTCAGTTTGAATGTGGGAACTACTC
TGGGGCTGCTGACTATCTGTACCAGTACAGGGCCTTGTGCACAAACAGTGAAAGGAGGCT
GAGTGCATTATGGGGAAAAATGGCGGCTGAGATATTGATGCAGAATTGGGATATTGCTCT
TGAAGAACTTAATCAATTAAAGGAAAAAGTTGATGACCCAAAGAGTTTCACATCACCTTT
AAATCAGATGCAAAGTAGGATATGGTTAATGCATTGGAGTCTCTTCATCTTTTTCAATCA
TGATAATGGAAGAACACTGATCATTGACTTGTTCAATCAGGATAAGTATCTAAATGCCAT
TCAAACCAATGCTCCCCATCTTTTACGCTATTTAGCTACTGCATTCATTGTCAACAAAAG
GAGGAGACCTCAATTCAAAGATTTTATTAAGGTTATCCAGCAAGAGCAAAACTCGTACAA
AGATCCCATTACAGAGTTTTTGGCATGTGTGTACGTCAATTATGACTTTGATGGGGCACA
GAAGAAGATGAAGGAGTGTGAAGAAGTGATATTGAATGATCCTTTCCTTGGCAAACGAGT
TGAAGATAGCAACTTTGCTACTGTTCCTTTGAGAGATGAGTTCCTCGAAAATGCTCGGCT
ATTCATCTTTGAGACCTATTGTCGAATTCATCAACGCATTGATATGGCAGTGCTTGCTGA
GAAGTTGAATCTAAATTATGAGGAAGCTCAAAGATGGATTGTGAATCTTATTCGGAACTC
AAAACTTGATGCCAAGATTGATGCAAAGTCGGGAACTGTTATCATGGAACCCACCCACCC
CAACGTGTAAGATTAATACACAGCTATATTTTTATGTAATTTCCACTTAACTATTTTGTT
TCAGTCGGCTTACTTTTATCTCATATTTTCTTGCCTTTACCCTTTTCATTCTCAGGTATG
AGCAATTGATTGACCACACCAAAGGACTTTCAGGACGTACTTACAAATTAGTCGGTCAAC
TTCTGGAACATGCACAAACACAAGCTGCGCGATAAATTATCAGAAGTACTTGTTGCAAGT
TGTCATCCCTGGAAATTGCTTCTTTAATTAGATTCAGAAGAGAGCAATTCTATTGATAAA
TCATTTCATTTCCATTTTTCTTTCAAATTTTGGAAGAGTTTATGATTATGTCCTCGGTGT
TTGCTGTAACTTTGTTTAATTATTCAAAGATTAACATGTATCTTTCTGAAAGAGGTCATT
CTTGTGAAATTTGTTTGATTCCACTTTGCCTTTTCTTTATTTCCAAACGAGAAGCTTTGG
CGCCCCCATAACTAACTCTTTTAAGTATCACCTTCACCGC