Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00609.2
CDS Infomation

gene=orange1.1t00609
Sequence

ATGGCTTCATCTCACCTCTTTCTTACTACATGTTTGTTAATTCTTGGCGTTATCTCCTCC
CAGACTTTTGCAGAGGGAGTGGTTTCCAAGCTCAAGCTTGATTCTCATATTCTCCAGGAT
TCAATCATCAAAGAAGTGAATGAGAACCCTAAGGCTGGATGGAAAGCTGCCAGAAATCCT
CAATTTTCCAATTACACTGTTGGGCAATTTAAGCACCTTCTTGGAGTCAAGCCAACACCT
AAAGGGCTGCTCTTGGGTGTCCCTGTTAAAACTCATGACAAATCCTTGAAGTTGCCTAAA
AGCTTTGATGCAAGGTCCGCTTGGCCACAATGCAGCACCATTAGTAGGATCCTAGATCAG
GGCCATTGTGGTTCTTGTTGGGCTTTTGGTGCTGTTGAAGCGCTATCTGATCGTTTCTGC
ATCCATTTTGGCATGAACCTATCTCTATCAGTTAATGATCTTTTAGCCTGCTGTGGCTTT
TTGTGTGGAGATGGTTGTGACGGGGGTTATCCAATTTCTGCATGGCGATACTTTGTCCAC
CATGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTGATAGTACTGGCTGTTCCCACCCT
GGTTGTGAGCCGGCATATCCTACTCCAAAGTGTGTGAGGAAGTGCGTCAAGAAAAACCAG
CTTTGGAGGAATTCAAAGCACTACAGTATTAGTGCATATAGAATCAATTCTGATCCAGAG
GACATAATGGCAGAAATTTACAAGAATGGACCAGTTGAAGTTTCCTTCACAGTTTATGAG
GATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATGGGGGGT
CATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGGGTATGT
TGA

Peptide Sequence

PEP ID

orange1.1t00609.2
PEP Infomation
Sequence

MASSHLFLTTCLLILGVISSQTFAEGVVSKLKLDSHILQDSIIKEVNENPKAGWKAARNP
QFSNYTVGQFKHLLGVKPTPKGLLLGVPVKTHDKSLKLPKSFDARSAWPQCSTISRILDQ
GHCGSCWAFGAVEALSDRFCIHFGMNLSLSVNDLLACCGFLCGDGCDGGYPISAWRYFVH
HGVVTEECDPYFDSTGCSHPGCEPAYPTPKCVRKCVKKNQLWRNSKHYSISAYRINSDPE
DIMAEIYKNGPVEVSFTVYEDFAHYKSGVYKHITGDVMGGHAVKLIGWGTSDDGEDYWVC
*

Transcript Sequence

Transcript ID

orange1.1t00609.2
Transcript Infomation

gene=orange1.1t00609 CDS=187-1089
Sequence

GAATCAAGGGGAGGTTCTGATCCTGAATTCCGAGAGTTCTCCCTCTATTATTGGACTTTG
TCATTATTTTAATTAACCTAATCCTCTTGCTTCCCAATAAGAAGGGGCCCGGGGGGTTGG
CTCACAACACAAGAAAAGTGCTCTCTCCCATTTCTCCTCTCTTCGTCCTTCCCGAGCCAG
TCATCCATGGCTTCATCTCACCTCTTTCTTACTACATGTTTGTTAATTCTTGGCGTTATC
TCCTCCCAGACTTTTGCAGAGGGAGTGGTTTCCAAGCTCAAGCTTGATTCTCATATTCTC
CAGGATTCAATCATCAAAGAAGTGAATGAGAACCCTAAGGCTGGATGGAAAGCTGCCAGA
AATCCTCAATTTTCCAATTACACTGTTGGGCAATTTAAGCACCTTCTTGGAGTCAAGCCA
ACACCTAAAGGGCTGCTCTTGGGTGTCCCTGTTAAAACTCATGACAAATCCTTGAAGTTG
CCTAAAAGCTTTGATGCAAGGTCCGCTTGGCCACAATGCAGCACCATTAGTAGGATCCTA
GATCAGGGCCATTGTGGTTCTTGTTGGGCTTTTGGTGCTGTTGAAGCGCTATCTGATCGT
TTCTGCATCCATTTTGGCATGAACCTATCTCTATCAGTTAATGATCTTTTAGCCTGCTGT
GGCTTTTTGTGTGGAGATGGTTGTGACGGGGGTTATCCAATTTCTGCATGGCGATACTTT
GTCCACCATGGTGTTGTTACCGAAGAGTGTGATCCCTACTTTGATAGTACTGGCTGTTCC
CACCCTGGTTGTGAGCCGGCATATCCTACTCCAAAGTGTGTGAGGAAGTGCGTCAAGAAA
AACCAGCTTTGGAGGAATTCAAAGCACTACAGTATTAGTGCATATAGAATCAATTCTGAT
CCAGAGGACATAATGGCAGAAATTTACAAGAATGGACCAGTTGAAGTTTCCTTCACAGTT
TATGAGGATTTTGCTCACTACAAATCTGGGGTCTACAAACACATCACAGGCGATGTAATG
GGGGGTCATGCTGTTAAGCTTATTGGTTGGGGAACTAGTGATGATGGCGAGGATTACTGG
GTATGTTGACAATTTCTCTACTCGAACAACTTTTATAGTAATGACTATATAACTTATTGA
GATCATGTACGAGATAATATACCTTCTCTCTGTTACAGATTCTCGCTAATCAGTGGAATA
GAAGCTGGGGTGCGGATGGTTACTTCAAGATTAAAAGAGGATCAAATGAGTGTGGTATTG
AAGAGGATGTGGTTGCTGGTTTGCCTTCATCCAAAAATCTTGTCAAAGAGATTACAAGTG
CAGATATGTTTGAGGATGCTTCAGCTTGAGAGCAGACTTTGCTATACCTTCATGTTGTTA
TTTATATATCAAATGTGTAGCTATAGGGGTGTATCGTTGAACCTAAGCTATCAAGGCATG
AAATGGGAAGCTCCCGTCTTGCATAATTGAATGTATTAATGGAGTTTAATGTTGTGTGTA
AAAATAGAACCAGTTGTAATAACTTCGTTTCTCCTCGCCGAATTATTCGTTTAGATGAAA
AATGTCACATCATTGCTCCTGTCTTGCATACCTCTTAGCTTCTTTTGTGTAAAGGGAGAA
CAACAAAGGTGACATTGATAAAAAGAAGTGAGAGTTATTAGATTACCCCAAAAAAAAAAA
TTCCACGGCTTCATAATAAAGGATTTTTAAGCGGAAC