Gene sequences

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SNP Detection
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Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	orange1.1t00602.1
CDS Infomation	gene=orange1.1t00602
Sequence	ATGTCGAGTAGATTGTTCAAGAAAGTTGTCAAAGAACAAGAACAGCAACAGCTAGAAGAA GAAGAGCAGCTGAAAGACGATGAATCAGAGTCTCCTGATTCGGCTCCTCGTTCTTCCATA AACCCCTTCGACCTCCTCCACGACGGTGATGATGACCCGGACCAGGAGACAGAGGTTGCT GATGAAGCCTCGAGCAGAGATGGGGATAAGAAGGAACTGTCTGCACAGCAAAGTACCAGA GATGTTGTACCAACATCCAATCAGAAGTCAAAGAAAAAGAAAAAGAAGAAAAGCAAGGAG GGTTCTACTTCAAATACTGATAAAGCTGAATGGCAATTGGATGAGGATTTAGATTCTTTA TCTTTGGGTATTGACTCTTCTACTAATCAACCTGGGCCTTCAAAAGCTAAACTAGAGAAT GCTAAAGTTCGTAGTAATGTAGTAAAACAGCATCCACCTTCTGTATATCAAATAGATCCC AAGTATTTGAATGTTGAAAATGAGCTGCGAAGAATATTTGGATCCAAAGTGGTGAAGTCA TTTGAGAGAAATCAACAGAGTGGCAGTTCTAGACCAGTGCGTGGGGCAAGACGTGTCACT CATCATATTAGAAAGACTATATTAGTCTCTCCATCTGACCATTGGCCTCGTTGGGACGCA AGTTTTTCAATGGAATTTCTGGAAAGCAAGGATGGATACAACTACTTCAGATATGTTCAC TCACCTACTTATGGTCAAGCTCAGAGAGCATTTGAAGCTGCCCAAGCTATTCACGATCTC AATGGTGTAGCAAGTGTTTTGATGTATCATCCTTATCATTTGGATTCATTGATAACGATG TCGGACTATTTTAAATTTGTGGCTGAACATCAGATGGCTGCAGATGCTGTTGCGAAGTGT CTATATGCCTTAGAATGTGCATGGAATCCAATGTTCACCCCTTTGCAGGGGAATTGCCAA TTGAAATTCAGCCATGAAACAAACAAACCATTGTTCAAGGCACTTTTCACTCACATGATA AACATGGACAGACGTGGCTGTCATCGATCTGCCTTGGAAGTGTGCAAACTGTTACTTTCT CTTGATTCTGAAGATCCAATGGGGGCCTTGTTCTGCATTGACTACTTTGCTGTAAGGGCT GGGGAATATTCATGGTTAGAACAGTTCTCTGAAGACTATAAAAGTGATAATTCTTTGTGG TTGTTCCCCAATTTCTCATATTCCCTTTCTATTTGTCGGTTTTATCTTGAGCGAGAGCAA ACGTCACAAGATGCTCATAAAGATAATACAAAGGCTACTTCAGCTGATCTTATGAAGCAA GCTCTGATGCTTCACCCTTCAGTTCTTAAGAAACTAGTGGCAAAGGTACCTTTAAAAGAT CAGGCATGGACAAAAATACTTGCGCACAGTTACTTCCATTCAGATGAAACCAAGATCCCC TCCTTGGATCACCTGATCAATATATATGTGGAGAGGAGCTATATTATATGGAGGCTTCCA GATCTACAAAAATTGCTTCGAGACACCGCAAAGCTGGTTATTGAAACATTGGAACACAAT AGAAGTGAAGCCAAGGACTGGGCCTGTGTAAGAGAGGAAGCATTCTCATCTGAAAAAAAT GAGTATGCTCATTTATTGGTTCAGGATTTCTCTGATGCAGTTTCATCTCTTCCACCTGAT AACCTACAAAACTTTGTGGTTGATGCAAGGATGGGGGAAGCCATGCATAATGCGATCCAC GCCGGTAATCCTCATGACGTCGGCCAAGCTCCACCCCCACGTGATGTTGCAAATCGCAAT CCTTTGGCTGTCTTGTTTGAGTCAATGCTTCCTTGGGTTAATTATGGGGATGGAGGAGAT GGTATTGCAGCTGATGAGGACTACCAAATTAATGGGCATTTTCAAGAGAATCAGGAAGAT TGA

Peptide Sequence

PEP ID	orange1.1t00602.1
PEP Infomation
Sequence	MSSRLFKKVVKEQEQQQLEEEEQLKDDESESPDSAPRSSINPFDLLHDGDDDPDQETEVA DEASSRDGDKKELSAQQSTRDVVPTSNQKSKKKKKKKSKEGSTSNTDKAEWQLDEDLDSL SLGIDSSTNQPGPSKAKLENAKVRSNVVKQHPPSVYQIDPKYLNVENELRRIFGSKVVKS FERNQQSGSSRPVRGARRVTHHIRKTILVSPSDHWPRWDASFSMEFLESKDGYNYFRYVH SPTYGQAQRAFEAAQAIHDLNGVASVLMYHPYHLDSLITMSDYFKFVAEHQMAADAVAKC LYALECAWNPMFTPLQGNCQLKFSHETNKPLFKALFTHMINMDRRGCHRSALEVCKLLLS LDSEDPMGALFCIDYFAVRAGEYSWLEQFSEDYKSDNSLWLFPNFSYSLSICRFYLEREQ TSQDAHKDNTKATSADLMKQALMLHPSVLKKLVAKVPLKDQAWTKILAHSYFHSDETKIP SLDHLINIYVERSYIIWRLPDLQKLLRDTAKLVIETLEHNRSEAKDWACVREEAFSSEKN EYAHLLVQDFSDAVSSLPPDNLQNFVVDARMGEAMHNAIHAGNPHDVGQAPPPRDVANRN PLAVLFESMLPWVNYGDGGDGIAADEDYQINGHFQENQED*

Transcript Sequence

Transcript ID	orange1.1t00602.1
Transcript Infomation	gene=orange1.1t00602 CDS=134-2056
Sequence	ATCTACATACTGTCTTCCCTAAATTATATTCCCTAAATGCCCCCCGTCCTCTGTTCTTCC CCGGTAGGACGCATATAAAATCTACACTACACATGATAACTGAAACCTCGAATCAAATTT GTAAGAGCCAATAATGTCGAGTAGATTGTTCAAGAAAGTTGTCAAAGAACAAGAACAGCA ACAGCTAGAAGAAGAAGAGCAGCTGAAAGACGATGAATCAGAGTCTCCTGATTCGGCTCC TCGTTCTTCCATAAACCCCTTCGACCTCCTCCACGACGGTGATGATGACCCGGACCAGGA GACAGAGGTTGCTGATGAAGCCTCGAGCAGAGATGGGGATAAGAAGGAACTGTCTGCACA GCAAAGTACCAGAGATGTTGTACCAACATCCAATCAGAAGTCAAAGAAAAAGAAAAAGAA GAAAAGCAAGGAGGGTTCTACTTCAAATACTGATAAAGCTGAATGGCAATTGGATGAGGA TTTAGATTCTTTATCTTTGGGTATTGACTCTTCTACTAATCAACCTGGGCCTTCAAAAGC TAAACTAGAGAATGCTAAAGTTCGTAGTAATGTAGTAAAACAGCATCCACCTTCTGTATA TCAAATAGATCCCAAGTATTTGAATGTTGAAAATGAGCTGCGAAGAATATTTGGATCCAA AGTGGTGAAGTCATTTGAGAGAAATCAACAGAGTGGCAGTTCTAGACCAGTGCGTGGGGC AAGACGTGTCACTCATCATATTAGAAAGACTATATTAGTCTCTCCATCTGACCATTGGCC TCGTTGGGACGCAAGTTTTTCAATGGAATTTCTGGAAAGCAAGGATGGATACAACTACTT CAGATATGTTCACTCACCTACTTATGGTCAAGCTCAGAGAGCATTTGAAGCTGCCCAAGC TATTCACGATCTCAATGGTGTAGCAAGTGTTTTGATGTATCATCCTTATCATTTGGATTC ATTGATAACGATGTCGGACTATTTTAAATTTGTGGCTGAACATCAGATGGCTGCAGATGC TGTTGCGAAGTGTCTATATGCCTTAGAATGTGCATGGAATCCAATGTTCACCCCTTTGCA GGGGAATTGCCAATTGAAATTCAGCCATGAAACAAACAAACCATTGTTCAAGGCACTTTT CACTCACATGATAAACATGGACAGACGTGGCTGTCATCGATCTGCCTTGGAAGTGTGCAA ACTGTTACTTTCTCTTGATTCTGAAGATCCAATGGGGGCCTTGTTCTGCATTGACTACTT TGCTGTAAGGGCTGGGGAATATTCATGGTTAGAACAGTTCTCTGAAGACTATAAAAGTGA TAATTCTTTGTGGTTGTTCCCCAATTTCTCATATTCCCTTTCTATTTGTCGGTTTTATCT TGAGCGAGAGCAAACGTCACAAGATGCTCATAAAGATAATACAAAGGCTACTTCAGCTGA TCTTATGAAGCAAGCTCTGATGCTTCACCCTTCAGTTCTTAAGAAACTAGTGGCAAAGGT ACCTTTAAAAGATCAGGCATGGACAAAAATACTTGCGCACAGTTACTTCCATTCAGATGA AACCAAGATCCCCTCCTTGGATCACCTGATCAATATATATGTGGAGAGGAGCTATATTAT ATGGAGGCTTCCAGATCTACAAAAATTGCTTCGAGACACCGCAAAGCTGGTTATTGAAAC ATTGGAACACAATAGAAGTGAAGCCAAGGACTGGGCCTGTGTAAGAGAGGAAGCATTCTC ATCTGAAAAAAATGAGTATGCTCATTTATTGGTTCAGGATTTCTCTGATGCAGTTTCATC TCTTCCACCTGATAACCTACAAAACTTTGTGGTTGATGCAAGGATGGGGGAAGCCATGCA TAATGCGATCCACGCCGGTAATCCTCATGACGTCGGCCAAGCTCCACCCCCACGTGATGT TGCAAATCGCAATCCTTTGGCTGTCTTGTTTGAGTCAATGCTTCCTTGGGTTAATTATGG GGATGGAGGAGATGGTATTGCAGCTGATGAGGACTACCAAATTAATGGGCATTTTCAAGA GAATCAGGAAGATTGAGTGGCATTGAGGTTAATGCTTCAAGCAAAAGTTTCCCTTTCCTG GTTTGGTCACTGTTGAATATCCATTACTTGTAAAGATTTTGATAGGGCATCTGAGAGGAA CTTGCATGTAGCAAGTGATCTGTCCAGCCAATTTTACCTAGCTATTTGTTATCCTTAGAT TTTATGCTCAACTGGGTGTGGAACTTGTTATGAAAGTCGATTTAGTATATTTTCTTTACA TAGCATTTCAACAAAGTGATTATACCAAAGCAGAGGTGTCTTCTGTGTTTGATAAATGCA CCATAGATTACTTGAGAATTGTTTTGTTTAAGTTCATTAGTTAAACCAAACACTCGCAGA TATGCAAGCAAATCATGGCGGACTTCAGACTTATTTTTCTCATCCTCTTCACCTTCAAAA GTTGTGCACGATAACATTTAAGAATTTCCTAGCATGTTACTTAAGGCCTGTGACTGGTAT TCTGCAAGTTATGACACAAAAATATGAATCCACTGCTGAACACTTGTTACATCACAAATT TGAAATCACGATTCCACACCCCAAGATTTTAGAGCCTTTAGAGAAAGCAAGGATAGGAAC TGATGTCAGGTAGCTGTAGAGTTGACAGGCTCATTGTAATCTTTAGCGATATTTCCAGCA ATTGTCGGAGCTGAGGGAAGATCAGAGC