Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00601.6
CDS Infomation

gene=orange1.1t00601
Sequence

ATGGGGTCTCTTCTACTTCGTGAATGGGCGGGGTTTCAACAGTTTCCTTCTGCAACTCAG
AACAAATTGATCGAATTACTGTCCAAATTGAAGCAAGAGAATGTAAACACGTTGACAATT
CTTGTCATGGGCAAAGGTGGTGTTGGAAAATCTTCAACTGTGAATTCTGTTATCGGTGAA
CGAGTAGTCACTGTTAATTCTTTCCAGTCCGAAGCGCTGAGACCAGTAATGGTTTCTCGT
TCCAAAGGAGGTTTCACATTGAACATCATTGATACTCCAGGCCTTGTAGAGGCTGGTTAT
GTTAATTACCAAGCTCTTGAGTTGATTAAAGGGTTTCTTTTGAATAAGACCATAGATGTT
CTGCTATATGCTGACCGTTTGGATGCATATAGAGTAGATGACTTGGATAGACAAATTATT
AAGGCTGTCACCGGAACTTTTGGCAAACAAATATGGCGCAAAAGTTTACTTGTTCTCACT
CATGCACAACTCTGCCCTCCTGATGGACTGAACTATGATGTTTACTGCTCTAAACGATCC
GATGCTCTTTTAAAGACTATTCGTCTAGGAGCTGGACTCGGGAAACATGAATTTGAGGAT
TATGCTGTTCCAGTCGCTTTGGTTGAGAACAGCGGCAGATGCAGTAAAAATGAGAATGAT
GAGAAGATTCTTCCAAATGGTAATGCGTGGATTCCAACCTTGGTTAAAGGGATCACAGAT
GTTGCGACAAATAAGAGCAAATCTATTGTAGTTGACAAGAAGCTGATTGACGGATCTGGC
TCTGATGATAAGGGGAAAATGTGGATCCCTGCCGTTATTGGGCTTCAGGTAAAGCTCATT
ATTTACTTCTTCTCTTTCTACTGTCCAAAACATGCTGGCCATTCTAAGTTCTGGGGTTGG
ATCAGGCTTTCCGTAATTTTTGGGATCTCAGTTGACTGA

Peptide Sequence

PEP ID

orange1.1t00601.6
PEP Infomation
Sequence

MGSLLLREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGE
RVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDV
LLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRS
DALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPTLVKGITD
VATNKSKSIVVDKKLIDGSGSDDKGKMWIPAVIGLQVKLIIYFFSFYCPKHAGHSKFWGW
IRLSVIFGISVD*

Transcript Sequence

Transcript ID

orange1.1t00601.6
Transcript Infomation

gene=orange1.1t00601 CDS=288-1226
Sequence

GCTAGACACACTTTCGTTTCAGGACTGTGATCTCTTTGGAAACATTATTGTTTATTTATT
TATTTTAAGTAAATAGTGATTGCAAATTAAGTTATGATTTTTATAATAATATTTTTCGAA
ATTAATTGAGGAAGAAATTAAGTCGGTCGAAATTTTGCTGGGCGGAAAATACAAACACTG
TAAAGTCCGACCACCCAGGCGAGGTAAGAAGATAACGGCTTTACTCCCTCAGTTTGGACG
CAACTAGAAGAAGAAACAACATTTACGCAAACAGCCCGAAGAAATCAATGGGGTCTCTTC
TACTTCGTGAATGGGCGGGGTTTCAACAGTTTCCTTCTGCAACTCAGAACAAATTGATCG
AATTACTGTCCAAATTGAAGCAAGAGAATGTAAACACGTTGACAATTCTTGTCATGGGCA
AAGGTGGTGTTGGAAAATCTTCAACTGTGAATTCTGTTATCGGTGAACGAGTAGTCACTG
TTAATTCTTTCCAGTCCGAAGCGCTGAGACCAGTAATGGTTTCTCGTTCCAAAGGAGGTT
TCACATTGAACATCATTGATACTCCAGGCCTTGTAGAGGCTGGTTATGTTAATTACCAAG
CTCTTGAGTTGATTAAAGGGTTTCTTTTGAATAAGACCATAGATGTTCTGCTATATGCTG
ACCGTTTGGATGCATATAGAGTAGATGACTTGGATAGACAAATTATTAAGGCTGTCACCG
GAACTTTTGGCAAACAAATATGGCGCAAAAGTTTACTTGTTCTCACTCATGCACAACTCT
GCCCTCCTGATGGACTGAACTATGATGTTTACTGCTCTAAACGATCCGATGCTCTTTTAA
AGACTATTCGTCTAGGAGCTGGACTCGGGAAACATGAATTTGAGGATTATGCTGTTCCAG
TCGCTTTGGTTGAGAACAGCGGCAGATGCAGTAAAAATGAGAATGATGAGAAGATTCTTC
CAAATGGTAATGCGTGGATTCCAACCTTGGTTAAAGGGATCACAGATGTTGCGACAAATA
AGAGCAAATCTATTGTAGTTGACAAGAAGCTGATTGACGGATCTGGCTCTGATGATAAGG
GGAAAATGTGGATCCCTGCCGTTATTGGGCTTCAGGTAAAGCTCATTATTTACTTCTTCT
CTTTCTACTGTCCAAAACATGCTGGCCATTCTAAGTTCTGGGGTTGGATCAGGCTTTCCG
TAATTTTTGGGATCTCAGTTGACTGAGGTTAGCATAACCAATTTTCTGTATGCTGGTCTT
GTCTTTTCATGTTGCAGTGGCTCATCCTGAAATGGATTGAAGGAGCAATAAAAAGTGATA
TTGCAAAGGATAAGAAGCCTTACTGAGAACTGCATGTATTGATCTCGCCAATTTTCAGTC
GTAATCGTCATCTTATGGTTCTTTATTGAGCTGCTTCTGAATATTTTGTTTATTGTATTT
ATTAGTTCTGCATTATGCGGATATTAGTTATAGAGTCTGTAACAGTTCCTATCGGCTACG
CGCTGAACAAACAGGAAAGCTATAAGTCATTAAGTTGGATGTCAGATAATAGAGATTTGT
TTGAACCATCTTAGTTTGTGTCAAGATAATTGAAATCTTTTTTATTTTAAGTTGGAGTTC
TCTCTCTGTCCCTTCAGATGTTTCATGTTGGGTTGTTTCTTCGTTTAGTCACAGTCCTTG
TTGCGAGTTTGCTAATAGCTATATATGGGATGACATCATTGGGGTTAGTTCAGCAATTTT
TCATCCCCTTTTTCTGCCTCCATTGTAG