Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00585.3
CDS Infomation

gene=orange1.1t00585
Sequence

ATGATGAACTTTGTGCAAGAAGAAAAAGGTAATAGCAATAATAATAATGAAGAAGATCAA
GATGAAGATCATCAGAAAGAGAGAATTAAGCTCCCTTTTTCCGTTTCTTCTTCATCTTCA
TCTGTCTCTTCTTCAAAGTACAAAGCTTTTGTCCCGCATCACCACCAAAACTCATGGCTG
CTGGGCCCCATTGATTCTCAAGAAGCAGCCACCAATTTTGACAACAGAGAAGACCTCATG
GACTTATCACTTGGAAACAACAACAACAATAATGAAGATCAACCACACAAACACAGCGGT
AATATAAATAATGCTAATGTTGCTAACGGTACTGGTAGTAGTACCACTGGTGAGAGCAGT
GGCATGTATAGGTCCATCGAGAAAGAACACATGTTCGATAAAGTTGTCACACCAAGCGAT
GTGGGCAAACTAAACCGACTTGTGATACCGAAACAACACGCCGAGAAGTACTTCCCGCTT
GACTCTTCGTCGAACGAAAAAGGCCTTCTTTTGAACTTCGAGGATCGGAACGGCAAGGCC
TGGAGGTTCAGGTATTCGTACTGGAACAGCAGCCAGAGCTATGTGATGACTAAAGGCTGG
AGCCGCTTTGTGAAGGATAAGAAGCTTGATGCTGGCGACACCGTGTCCTTTCAGCGCGGC
GTTGGGGAGCTGGGGAAAGATCGCCTGTACATTGATTGGAGGCGCAGGCCTGATGTTCAT
CATGTTCCAGATCCCACGACGCTTGCACAAATGCAGTTTCAAAATCAGCTCCGCTTTCAG
CAGTCGCTGCGCTGGGGCACCAGGCTCTACTCGCTCCCCCAATCTTTGTCAAATTATGGT
CCTTTCAGTTACAATACGATTCACAATCCTTATTACCAACATCATCAACAACAACAGATT
CTTGGTTTTGGTGGCAATGCGTCATCGACGATGCCGGTACAGTATTACCTAAGGCCATCG
TCAGTTTCACAGCAAATTGAGGGAGGGCATATGCCGATGGTGATTGATTCTGTGCCTGTC
GTTGTTCCGGGCAAAACTGCCAGCTCTACTGCAGCAAAGCGGCTAAGGCTGTTCGGGGTA
AACATGGACTGCCCTACACAAGATGATCAATCTCCAGCCACTAGTAGTAGTTCCACAAGG
CAAGCTGCAGCATCTGAGTATTCAAGCAAAGGAAAATCTTCCTTGTCTTTTGATTTGGAT
CTATAA

Peptide Sequence

PEP ID

orange1.1t00585.3
PEP Infomation
Sequence

MMNFVQEEKGNSNNNNEEDQDEDHQKERIKLPFSVSSSSSSVSSSKYKAFVPHHHQNSWL
LGPIDSQEAATNFDNREDLMDLSLGNNNNNNEDQPHKHSGNINNANVANGTGSSTTGESS
GMYRSIEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFPLDSSSNEKGLLLNFEDRNGKA
WRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDTVSFQRGVGELGKDRLYIDWRRRPDVH
HVPDPTTLAQMQFQNQLRFQQSLRWGTRLYSLPQSLSNYGPFSYNTIHNPYYQHHQQQQI
LGFGGNASSTMPVQYYLRPSSVSQQIEGGHMPMVIDSVPVVVPGKTASSTAAKRLRLFGV
NMDCPTQDDQSPATSSSSTRQAAASEYSSKGKSSLSFDLDL*

Transcript Sequence

Transcript ID

orange1.1t00585.3
Transcript Infomation

gene=orange1.1t00585 CDS=407-1612
Sequence

AACGCCCCTTACCCCTTAATTCTCTCTCATCTCATTCTCAATTTTCATGGGTATCTATCC
ATCCATCTATCTCTCTTTAAGAACCCAAAAAGCAAAACAAATTTTTTCGCTTCACTTGTT
TTTCCAAGTGACTAATATTTGCTTCTTTAATTTCCTTCTAACCGAGCTCTTCTCATATAA
TATGTGTCCACTACAACAAACAACTTGGTGCTTTAATTTGTTGAATCTTCCATGGCCCTG
TCTTGTTTAGGGTTTTGGGTTTTCTTGGTCAAAGAAGAAGAAGAAGAAGAAGGCAGCGAG
TCTCTCGTCCGTTTTTGCATTGAGAGTTATCTCTGTGTTATTTGGCTCTTCAAGGATCTG
ACACAGCAAGATCATATATAGCAAGAATTCACAGCAGGTGTGGATCATGATGAACTTTGT
GCAAGAAGAAAAAGGTAATAGCAATAATAATAATGAAGAAGATCAAGATGAAGATCATCA
GAAAGAGAGAATTAAGCTCCCTTTTTCCGTTTCTTCTTCATCTTCATCTGTCTCTTCTTC
AAAGTACAAAGCTTTTGTCCCGCATCACCACCAAAACTCATGGCTGCTGGGCCCCATTGA
TTCTCAAGAAGCAGCCACCAATTTTGACAACAGAGAAGACCTCATGGACTTATCACTTGG
AAACAACAACAACAATAATGAAGATCAACCACACAAACACAGCGGTAATATAAATAATGC
TAATGTTGCTAACGGTACTGGTAGTAGTACCACTGGTGAGAGCAGTGGCATGTATAGGTC
CATCGAGAAAGAACACATGTTCGATAAAGTTGTCACACCAAGCGATGTGGGCAAACTAAA
CCGACTTGTGATACCGAAACAACACGCCGAGAAGTACTTCCCGCTTGACTCTTCGTCGAA
CGAAAAAGGCCTTCTTTTGAACTTCGAGGATCGGAACGGCAAGGCCTGGAGGTTCAGGTA
TTCGTACTGGAACAGCAGCCAGAGCTATGTGATGACTAAAGGCTGGAGCCGCTTTGTGAA
GGATAAGAAGCTTGATGCTGGCGACACCGTGTCCTTTCAGCGCGGCGTTGGGGAGCTGGG
GAAAGATCGCCTGTACATTGATTGGAGGCGCAGGCCTGATGTTCATCATGTTCCAGATCC
CACGACGCTTGCACAAATGCAGTTTCAAAATCAGCTCCGCTTTCAGCAGTCGCTGCGCTG
GGGCACCAGGCTCTACTCGCTCCCCCAATCTTTGTCAAATTATGGTCCTTTCAGTTACAA
TACGATTCACAATCCTTATTACCAACATCATCAACAACAACAGATTCTTGGTTTTGGTGG
CAATGCGTCATCGACGATGCCGGTACAGTATTACCTAAGGCCATCGTCAGTTTCACAGCA
AATTGAGGGAGGGCATATGCCGATGGTGATTGATTCTGTGCCTGTCGTTGTTCCGGGCAA
AACTGCCAGCTCTACTGCAGCAAAGCGGCTAAGGCTGTTCGGGGTAAACATGGACTGCCC
TACACAAGATGATCAATCTCCAGCCACTAGTAGTAGTTCCACAAGGCAAGCTGCAGCATC
TGAGTATTCAAGCAAAGGAAAATCTTCCTTGTCTTTTGATTTGGATCTATAATTTGCTAT
ATGCATTAATATAATTTCAAGGATAATTACTTTTATAGAAACTCGTATCAATTAATTTTT
AAGTGCATCACATTATTTAGTTGAGGGGGTGTAACAAATTAATATATTTATAAATAATAT
AATATCAAGCA