Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00566.5
CDS Infomation

gene=orange1.1t00566
Sequence

ATGGCTACCGCTGTAGCCGCTTCAAGCTTCGTCTCAAGGAGTTATGGACATGAGGTAGCT
TCAGGATTGAATAGTAAGGCATCACAGATGAAATTTAGGTGTATGAAGCACAGTGGGCTG
AGAAGTTTAAATATCATAGACGATCTCCAAGTGAAAACAATGGCATCGAAACTAGCCACC
AGCAGGCAAGCTGGGAGGAATGGATTTAGAAGCCAGAACGGGCCATCCTTAATGATTGTT
TGTGGGGTTGGCCTGAATATCCTCTTTGTTGGAACAGAGGTTGCTCCTTGGAGTAAAACT
GGGGGACTTGGTGATGTTCTTGGAGGTCTGCCACCAGCACTGGCCGCCAATGGGCACCGT
GTCATGACGATTGCACCCCGATATGACCAGTACAAAGATGCTTGGGATACTGATGTTGTA
ATTGAGCTGAAAGTTGGAGACAAAATTGAAAAAGTTCGCTTCTTTCATTGCCACAAGAGA
GGAGTTGATCGGGTGTTTGTGGATCATCCTTGGTTTCTTGCGAAGGTGTGGGGTAAAACC
CAATCCAAAATCTATGGGCCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTC
AGCTTGTTGTGCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACAAA
TATTTCTCTGGACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGACTGGCATACTTCC
CTTATCCCTTGTTACCTGAAAACTATGTATAAGCCCAAAGGGATGTACAAAAGTGCCAAA
GTTGTTTTTTGTATCCACAATATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGA
CTTCTCAACCTTCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAA
CCTGTGAGAGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGGTC
TTAACTGTGAGCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGACAAAGGAGTAGAA
TTGGATAATATCATCCGTAAAACTGGCATTAAGGGAATTGTGAACGGGATGGATGTCCAG
GAGTGGAACCCCTTGACTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATG
GATGCGAAGCCTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGA
AATATTCCTGTCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGATATTCTT
GCAGCTGCCATTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGTACTGGC
AAAAAACCAATGGAGAAGCAGCTTGAACAGTTGGAGATACTGTACCCTGAGAAAGCCAGA
GGAGTAGCGAAATTCAATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATT
TTGATTCCAAGCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGA
ACCGTACCTATCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACA
GGATTCCAGATGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGGCT
GCAGTGTCCACAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAAGCTTTGGCTGAA
ATGATGAAAAATGGCATGGCTCAAGATCTTTCATGGAAAGTGAGTATTGGAACTGTGCAA
GAAGAAGACTCTTTAATTTAG

Peptide Sequence

PEP ID

orange1.1t00566.5
PEP Infomation
Sequence

MATAVAASSFVSRSYGHEVASGLNSKASQMKFRCMKHSGLRSLNIIDDLQVKTMASKLAT
SRQAGRNGFRSQNGPSLMIVCGVGLNILFVGTEVAPWSKTGGLGDVLGGLPPALAANGHR
VMTIAPRYDQYKDAWDTDVVIELKVGDKIEKVRFFHCHKRGVDRVFVDHPWFLAKVWGKT
QSKIYGPRTGEDYQDNQLRFSLLCQAALEAPRILNLNSNKYFSGPYGEDVVFVANDWHTS
LIPCYLKTMYKPKGMYKSAKVVFCIHNIAYQGRFAFEDFGLLNLPAQFKSSFDFIDGYNK
PVRGRKINWMKAGILESDMVLTVSPHYAQELVSGEDKGVELDNIIRKTGIKGIVNGMDVQ
EWNPLTDKYIGVKYDASTVMDAKPLLKEALQAEVGLPVDRNIPVIGFIGRLEEQKGSDIL
AAAIPHFIKENVQIIVLGTGKKPMEKQLEQLEILYPEKARGVAKFNIPLAHMIIAGADFI
LIPSRFEPCGLIQLHAMRYGTVPIVASTGGLVDTVEEGFTGFQMGSFSVDCEAVDPVDVA
AVSTTVRRALATYGTQALAEMMKNGMAQDLSWKVSIGTVQEEDSLI*

Transcript Sequence

Transcript ID

orange1.1t00566.5
Transcript Infomation

gene=orange1.1t00566 CDS=291-2051
Sequence

TTTTGTTCGTATATGCCTTCTTTCATCCAACTGTCTTAACATCTCTCGCAACTTGAAGTG
AAGTTGTAAACCGCGAGAAAATCCTGCGGTTCGTATTAACCACGAATCTCTAGTAAGTGA
TTTCCCATGTGCAAGGCACGGCACGGCAACAACTCTACAAAAGAGCAAAGAGCGAAGTCA
GCTGATGTTCACTTCACGTTCATTCATAGACGCCTGAGCACCAGATTTCATCAGGAAACT
AAGAGGGAAACAAATCTTCAGCAGAGACTACAAACATAATAATATCAGCTATGGCTACCG
CTGTAGCCGCTTCAAGCTTCGTCTCAAGGAGTTATGGACATGAGGTAGCTTCAGGATTGA
ATAGTAAGGCATCACAGATGAAATTTAGGTGTATGAAGCACAGTGGGCTGAGAAGTTTAA
ATATCATAGACGATCTCCAAGTGAAAACAATGGCATCGAAACTAGCCACCAGCAGGCAAG
CTGGGAGGAATGGATTTAGAAGCCAGAACGGGCCATCCTTAATGATTGTTTGTGGGGTTG
GCCTGAATATCCTCTTTGTTGGAACAGAGGTTGCTCCTTGGAGTAAAACTGGGGGACTTG
GTGATGTTCTTGGAGGTCTGCCACCAGCACTGGCCGCCAATGGGCACCGTGTCATGACGA
TTGCACCCCGATATGACCAGTACAAAGATGCTTGGGATACTGATGTTGTAATTGAGCTGA
AAGTTGGAGACAAAATTGAAAAAGTTCGCTTCTTTCATTGCCACAAGAGAGGAGTTGATC
GGGTGTTTGTGGATCATCCTTGGTTTCTTGCGAAGGTGTGGGGTAAAACCCAATCCAAAA
TCTATGGGCCTAGGACTGGAGAGGACTACCAGGACAACCAACTTCGCTTCAGCTTGTTGT
GCCAGGCAGCTCTTGAAGCACCGAGAATTCTGAATCTTAACAGCAACAAATATTTCTCTG
GACCATATGGTGAAGATGTCGTTTTTGTTGCTAATGACTGGCATACTTCCCTTATCCCTT
GTTACCTGAAAACTATGTATAAGCCCAAAGGGATGTACAAAAGTGCCAAAGTTGTTTTTT
GTATCCACAATATTGCTTACCAAGGAAGATTTGCATTTGAGGATTTTGGACTTCTCAACC
TTCCAGCTCAATTCAAAAGCTCTTTTGACTTTATTGATGGATACAATAAACCTGTGAGAG
GAAGAAAAATCAACTGGATGAAAGCTGGAATATTAGAATCAGACATGGTCTTAACTGTGA
GCCCACACTATGCCCAAGAACTTGTTTCTGGTGAAGACAAAGGAGTAGAATTGGATAATA
TCATCCGTAAAACTGGCATTAAGGGAATTGTGAACGGGATGGATGTCCAGGAGTGGAACC
CCTTGACTGACAAATATATAGGTGTCAAATATGATGCTTCAACTGTGATGGATGCGAAGC
CTCTTCTGAAGGAAGCCCTCCAAGCAGAAGTTGGGTTGCCTGTCGATAGAAATATTCCTG
TCATAGGCTTCATTGGTAGACTTGAAGAGCAGAAAGGCTCAGATATTCTTGCAGCTGCCA
TTCCCCATTTCATCAAAGAGAATGTTCAGATAATAGTCCTTGGTACTGGCAAAAAACCAA
TGGAGAAGCAGCTTGAACAGTTGGAGATACTGTACCCTGAGAAAGCCAGAGGAGTAGCGA
AATTCAATATTCCTCTGGCGCATATGATAATAGCAGGAGCTGATTTTATTTTGATTCCAA
GCAGATTTGAACCTTGTGGTCTCATTCAATTACATGCCATGCGTTATGGAACCGTACCTA
TCGTGGCTTCCACTGGTGGTTTGGTTGACACTGTGGAAGAAGGCTTTACAGGATTCCAGA
TGGGAAGCTTCAGTGTTGACTGTGAGGCTGTGGATCCAGTAGATGTGGCTGCAGTGTCCA
CAACCGTCAGAAGAGCTCTTGCAACCTATGGTACTCAAGCTTTGGCTGAAATGATGAAAA
ATGGCATGGCTCAAGATCTTTCATGGAAAGTGAGTATTGGAACTGTGCAAGAAGAAGACT
CTTTAATTTAGTGGCTTCAGTTGAAACCTGTCTTTTCAATTCGTTCAAAAGATATCTGAG
CTGATATGTTTTTTAATGGGACAGGGACCAGCTAAGAAATGGGAGGAGACCCTACTTAAC
CTGGAAGTTGCTGGTAGTGAACCTGGAATTGACGGCGAAGAAATTGCTCCTCTTGCCAAG
GAAAATGTGGCCACTCCTTGATCGAGGCTACAAAAATCTCCACTTTTATTTTGGACCGCA
AACATGTTCCTGTAATTCTCCACAACCCAAGATATTACTTAGGAAATAACATAGGTTGGC
AGTATATGCAGCATGCGCTATTTTCAATAATGGTTTGGAGTTGAGACATTAGTGTTTACC
TTGTATAATGAAATATTAAGTTCTGTTTTACAGTTTTGTAAAAGGGCTCTGAGGGCTGTC
GCCACTCTCCTGAAATGAAAAAGTTCAACTGAACAAGTTTATAGATTCAACGCTTAACAT
CAATGTTTTTTTTTTTTTTTTTTCACTTTTTCTCTCGTGTATGCGCGGAGGATTCTACAA
ACATATTAGAATCTAAAATCTACTAGAATTTAGATCC