Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00556.1
CDS Infomation

gene=orange1.1t00556
Sequence

ATGGATAGAGTAGAGATTGATAGAGAGAGATTGACGGCGGAGATGGCCTTTAAAGAGGAC
TCCTCCGCCGTCATCAAGATTCGACAACGCTTGCCGGATTTTCTACAATCCGTGAAGCTC
AAGTATGTGAAGCTAGGATATGGGTACTCATGCAATTTTGCAACAATTATCATGTTTGTT
CTTATAGTACCTCTGTCCATAGCTACCGTAATACAGCTCAGCGGTCTGAAATTGGACCGG
ATTCTGGAGTTGTTATCTAAGGAAAAGCTTCAACTCAACATGATCATTGATGCAGCCAGT
GATCAGTTAGCAGTTTCAACAATGTTATTTTTCCTCTTCGGCCTTTACTGGTCGAAGCGT
TCGAGTCCAGTTTATCTCGTGGACTTCTCGTGTTACAAACCGGCTGATGAACGTAAAATG
TCTATGGAGGCGTTCTTGAAAATGAGTGAAGAAAGCAGCTTCTTCCAAGAAGAGTCGCTG
CAGTTCCAGAAGCGCATAGCGAGCCGGGCAAGTGTTGGTGACGAAACATATTTATCAAGA
GGAATAACTTCCAGACCACCAAATATTTGCATTCACGAGGCCAGGGTGGAGGCTGACGAG
GTCATGTTTGGCGCACTGGATTCTCTTTTTGAGAAGACTGGTGTTGAACCTAGTGACGTG
GGAATACTTATAGTGAACTGCAGTTTATTCAATCCCGTCCCGTCTCTCTCTTCGATGATA
GTGAACCATTACAAGCTCAGAGATGATATCAAGACTTACAATCTTGGGGGCATGGGTTGC
AGTGCAGGCCTTATTTCCATCGAGCTTGCTAAGAACCTCCTCAAGGCAAATCCTAACTCG
TATGCAGTTGTGGTAAGCACCGAAAACATTACTCAGAATTGGTATTCCGGCAATGACCGT
TCCATGCTGTTATGCAACTGTCTATTCCGCATGGGTGGTGCTGCCGTGCTTTTATCAAAC
AAGGCTCGAGACCGGTCCCGCTCCAAGTACGAGCTGGTTCATTTAGTTCGGACTCACAAA
GGCGCCGATGATAAGCACTTCAATTGTGTCCGCCAAGCAGAGGATGACCAAGGAATAGTT
GGAGTTTCACTCTCCAGAGATTTAATGGCTGTGGCTGGAGATGCATTAAAAACAAACATC
ACAACTTTGGGCCCTCTTGTCTTGCCGTGGATAGAGCAATTCAGGTTCTTTGTCACCCTC
GTTCGTAGGAAGATGTTCAAAGCTAAGGTTAAGCCTTATATACCTGATTTTAAACTTGCT
TTTGAACATTTTTGCATACATTCCGGTGGAAGGGCCGTTTTGGACGAGATACAGAAGAAC
TTGCAACTCCGTGATTGGCACATGGAACCGTCAAGAATGACACTGCATAGGTTTGGTAAC
ACTTCTAGTAGCTCACTTTGGTATGAACTGGCTTATACCGAGGGAAAGGGTCGGGTCGCC
AGAGGAGATCGGGTCTGGCAGATAGCTTTCGGTTCGGGTTTCAAGTGTAATAGTGCTGTT
TGGAGAGCGCTCATGGACATTCCCGTCGGTAATTGGCGAGGCAACGCCTGGGTTGATTCT
ATTGATAAGTATCCCGTCAAACTTAACGTTGCTTGA

Peptide Sequence

PEP ID

orange1.1t00556.1
PEP Infomation
Sequence

MDRVEIDRERLTAEMAFKEDSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNFATIIMFV
LIVPLSIATVIQLSGLKLDRILELLSKEKLQLNMIIDAASDQLAVSTMLFFLFGLYWSKR
SSPVYLVDFSCYKPADERKMSMEAFLKMSEESSFFQEESLQFQKRIASRASVGDETYLSR
GITSRPPNICIHEARVEADEVMFGALDSLFEKTGVEPSDVGILIVNCSLFNPVPSLSSMI
VNHYKLRDDIKTYNLGGMGCSAGLISIELAKNLLKANPNSYAVVVSTENITQNWYSGNDR
SMLLCNCLFRMGGAAVLLSNKARDRSRSKYELVHLVRTHKGADDKHFNCVRQAEDDQGIV
GVSLSRDLMAVAGDALKTNITTLGPLVLPWIEQFRFFVTLVRRKMFKAKVKPYIPDFKLA
FEHFCIHSGGRAVLDEIQKNLQLRDWHMEPSRMTLHRFGNTSSSSLWYELAYTEGKGRVA
RGDRVWQIAFGSGFKCNSAVWRALMDIPVGNWRGNAWVDSIDKYPVKLNVA*

Transcript Sequence

Transcript ID

orange1.1t00556.1
Transcript Infomation

gene=orange1.1t00556 CDS=171-1766
Sequence

CACGACTCCATCTCTTCCTCGCCTTATAAACTATATCAAGGCGTGTAGAGTTTGTTTTCG
TATTCAGCGATTGTTTTTGTTAGAGGGTACAGTTTATTATTAGTTCAGCTCCTTTACATT
CCCTTGTTCATAAGTTTAACAAAAAAAGAACACAGAGAGAGAGAGAGAACATGGATAGAG
TAGAGATTGATAGAGAGAGATTGACGGCGGAGATGGCCTTTAAAGAGGACTCCTCCGCCG
TCATCAAGATTCGACAACGCTTGCCGGATTTTCTACAATCCGTGAAGCTCAAGTATGTGA
AGCTAGGATATGGGTACTCATGCAATTTTGCAACAATTATCATGTTTGTTCTTATAGTAC
CTCTGTCCATAGCTACCGTAATACAGCTCAGCGGTCTGAAATTGGACCGGATTCTGGAGT
TGTTATCTAAGGAAAAGCTTCAACTCAACATGATCATTGATGCAGCCAGTGATCAGTTAG
CAGTTTCAACAATGTTATTTTTCCTCTTCGGCCTTTACTGGTCGAAGCGTTCGAGTCCAG
TTTATCTCGTGGACTTCTCGTGTTACAAACCGGCTGATGAACGTAAAATGTCTATGGAGG
CGTTCTTGAAAATGAGTGAAGAAAGCAGCTTCTTCCAAGAAGAGTCGCTGCAGTTCCAGA
AGCGCATAGCGAGCCGGGCAAGTGTTGGTGACGAAACATATTTATCAAGAGGAATAACTT
CCAGACCACCAAATATTTGCATTCACGAGGCCAGGGTGGAGGCTGACGAGGTCATGTTTG
GCGCACTGGATTCTCTTTTTGAGAAGACTGGTGTTGAACCTAGTGACGTGGGAATACTTA
TAGTGAACTGCAGTTTATTCAATCCCGTCCCGTCTCTCTCTTCGATGATAGTGAACCATT
ACAAGCTCAGAGATGATATCAAGACTTACAATCTTGGGGGCATGGGTTGCAGTGCAGGCC
TTATTTCCATCGAGCTTGCTAAGAACCTCCTCAAGGCAAATCCTAACTCGTATGCAGTTG
TGGTAAGCACCGAAAACATTACTCAGAATTGGTATTCCGGCAATGACCGTTCCATGCTGT
TATGCAACTGTCTATTCCGCATGGGTGGTGCTGCCGTGCTTTTATCAAACAAGGCTCGAG
ACCGGTCCCGCTCCAAGTACGAGCTGGTTCATTTAGTTCGGACTCACAAAGGCGCCGATG
ATAAGCACTTCAATTGTGTCCGCCAAGCAGAGGATGACCAAGGAATAGTTGGAGTTTCAC
TCTCCAGAGATTTAATGGCTGTGGCTGGAGATGCATTAAAAACAAACATCACAACTTTGG
GCCCTCTTGTCTTGCCGTGGATAGAGCAATTCAGGTTCTTTGTCACCCTCGTTCGTAGGA
AGATGTTCAAAGCTAAGGTTAAGCCTTATATACCTGATTTTAAACTTGCTTTTGAACATT
TTTGCATACATTCCGGTGGAAGGGCCGTTTTGGACGAGATACAGAAGAACTTGCAACTCC
GTGATTGGCACATGGAACCGTCAAGAATGACACTGCATAGGTTTGGTAACACTTCTAGTA
GCTCACTTTGGTATGAACTGGCTTATACCGAGGGAAAGGGTCGGGTCGCCAGAGGAGATC
GGGTCTGGCAGATAGCTTTCGGTTCGGGTTTCAAGTGTAATAGTGCTGTTTGGAGAGCGC
TCATGGACATTCCCGTCGGTAATTGGCGAGGCAACGCCTGGGTTGATTCTATTGATAAGT
ATCCCGTCAAACTTAACGTTGCTTGAAATTTGAATCTGAATGGGGACATGAAAAGAGAAA
ATGTAATGTGATGATGACGTGGTTGGATACTCTTTATTCTTTCCCTTATTTTTTTAACTT
TTACTGTTCGAAGTTCCCCTTACTTGTTAGTGATGTAAAAACCCCTGCACTGGTACTAAA
TATAGTACTATATCCAGATTAAAAATTTTCTTTTCGTTTTCAATTC