Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00544.1
CDS Infomation

gene=orange1.1t00544
Sequence

ATGTTAGATGGGGGCGAATATTCTCCGGCGGCTGAGCCATACAGCTGCATGAACGAGATC
ACAACAACAACGACAACCAGAAAGAAGAAGTGCAAGAACAAGAGGAGGTTCAGTGATGAA
CAGATCAGATCATTGGAACTCATGTTTGAAAACGAAACTAGACTCGAGCCTCGAAAGAAG
CTGCAGTTGGCTAAAGAACTTGGGTTGCAGCCTCGTCAGGTTGCAATATGGTTTCAGAAT
AAGAGAGCTAGATGGAAGTCGAAGCAGCTTGAACGAGACTACAACATACTTCAAGCCAAT
TTCAATAACCTTGCTTCAAGGTTCGAAGCTCTGAAGAAAGAAAAACAAGCCTTGGTTATT
CAGTTGCAAAAGACGAATGAGTTGTTGCAAAATAAGCCACGACGGGAGGATCAGAGTCCG
AGTGAGAGGCAGTGTTGCGGTCAAGTTGAAGGTGTAAACAGCATGGAGAGCGAATTGGAC
AATGGAGACAGGGACACCAACAAGTGTGAATCAGAAGTGAAGCCAAGCTTGTCAGCAGAA
CTGAGGCTAGGTGTTTTGTCAGATGATGATAGCAGTATTAAGACAGAGTATTTTGGACTC
CATGAAGATGAGCCTAATCTTATGACTATGGTGGAACCTGCAGAGAGTTCCATGACTTCA
CCAGAAGATTGGGGCAATTTTGAGTCAGATGGTCTCTTCGATCAATCTAGTAGTGAATAT
CAGTGGTGGGACTTCTGGTCATGA

Peptide Sequence

PEP ID

orange1.1t00544.1
PEP Infomation
Sequence

MLDGGEYSPAAEPYSCMNEITTTTTTRKKKCKNKRRFSDEQIRSLELMFENETRLEPRKK
LQLAKELGLQPRQVAIWFQNKRARWKSKQLERDYNILQANFNNLASRFEALKKEKQALVI
QLQKTNELLQNKPRREDQSPSERQCCGQVEGVNSMESELDNGDRDTNKCESEVKPSLSAE
LRLGVLSDDDSSIKTEYFGLHEDEPNLMTMVEPAESSMTSPEDWGNFESDGLFDQSSSEY
QWWDFWS*

Transcript Sequence

Transcript ID

orange1.1t00544.1
Transcript Infomation

gene=orange1.1t00544 CDS=242-985
Sequence

AGAAATAGCATACGTTATCAGGTTGGATATAAATGGAAAGTGAGAAACTCAGCCCCCCCC
GTCAGTCTTAGAAACAAAACCGTGATATGCACACAATAAGCAAATATAATTAAAACATGC
ACAGAGCACTCGACACAGCTTAAACATCCCCCAAAAACACAGCCCCCTCTTTGAATGATT
TTTTTTAAAAAATTAGAATATACAAAAATTATCTAGTCACCAGCACAAATTCCGACTAAA
GATGTTAGATGGGGGCGAATATTCTCCGGCGGCTGAGCCATACAGCTGCATGAACGAGAT
CACAACAACAACGACAACCAGAAAGAAGAAGTGCAAGAACAAGAGGAGGTTCAGTGATGA
ACAGATCAGATCATTGGAACTCATGTTTGAAAACGAAACTAGACTCGAGCCTCGAAAGAA
GCTGCAGTTGGCTAAAGAACTTGGGTTGCAGCCTCGTCAGGTTGCAATATGGTTTCAGAA
TAAGAGAGCTAGATGGAAGTCGAAGCAGCTTGAACGAGACTACAACATACTTCAAGCCAA
TTTCAATAACCTTGCTTCAAGGTTCGAAGCTCTGAAGAAAGAAAAACAAGCCTTGGTTAT
TCAGTTGCAAAAGACGAATGAGTTGTTGCAAAATAAGCCACGACGGGAGGATCAGAGTCC
GAGTGAGAGGCAGTGTTGCGGTCAAGTTGAAGGTGTAAACAGCATGGAGAGCGAATTGGA
CAATGGAGACAGGGACACCAACAAGTGTGAATCAGAAGTGAAGCCAAGCTTGTCAGCAGA
ACTGAGGCTAGGTGTTTTGTCAGATGATGATAGCAGTATTAAGACAGAGTATTTTGGACT
CCATGAAGATGAGCCTAATCTTATGACTATGGTGGAACCTGCAGAGAGTTCCATGACTTC
ACCAGAAGATTGGGGCAATTTTGAGTCAGATGGTCTCTTCGATCAATCTAGTAGTGAATA
TCAGTGGTGGGACTTCTGGTCATGAATCATCCACCAAAGGCATTTGTTTTAGCTTATTAA
GAAGAGAAATCTCAGCGAACCATGATGAGGTGGAGGAATTATTTTGCGGACCATTAATTG
AATCTCTATCAGTTTTTGGTGCCATTGCAAAAGCTGTCAATGAGTCAACAACAACCCCAC
TTCACAAAATCTGCTACATATGCAGTTGCTGTAATAACTGGTTTGGGCCAGGAATGAGAT
GATTTGACTAGTTTAGAGAAGCATTTAGTAGGATTGTGTGTAGTTAAGTTATAGCTAGCT
AGGAAGAGCCTTCAAAGAGCCGGATTGAAGGGCTTAAATTAGAAAAACATCCGCTTGTTT
GTTGGGGTTGGTGCGTATTACTGTGTAACCAGAGGAAAGAGAGATTGATTCTGCTGCGTT
TCCCTCCCAACAAATTAAGAGAGATGTCATCCAACATCATTCAGCTAGAGCCTTGGAGGC
ACGATAACGAACTCCGTTTGTGTTTCTCTTGCCCCCTCCTTTTTAGGTGCCTAAATTTCA
ATTTGTTATTTCTCTCTTTTCTTAGTCTTCTAATGGCTTGTGTATTGTTATTGATATGAT
TATTTGTCCACATACATATTACATAGAACAGAGTTTCATGTCATATGTACCGCGTTCCGC
GTAGGATCAGAGACATGCTTTATTAATAATCTATCGCCAGTAATTTCAAAGTGAGAGCAG
TGAGGCGATCAAAGAAATTGCAGAAATGAAGAGTCAATTAACTATGATGTGCTGGTGCTA
CATCGAAACGGCCAAAAATATTCCAAGTGATTTTCTCATCAGAGGAACAGAGCAAAAAAT
TAGAAATAAACAGCTGAATTATGAAAATAACTAGAGAGTCAACTTGATTTATTAATCATT
TAATTAGATTAGAACACCCTCTTCTTTCCTGCCTCTGCGCATTAGATACTCCTCATCTCT
AACTGATTACAGAAACATAAGATAAGAGATCCATTATCTGACTCTGAGGTCTGACCCTTC
AAATTCACAACGCGTGCTCATTAACTTTGATGTAGATGTTTGATATTTTTAGCATAACAA
CAATATTCGCAAAACACAATTAAAGCAGAAAGAATCACATGTACGTTCATTCTCATTGAA
ATTGAAAGGGATGACTGAAATGTGAGACTGAGAGCAGGACACAATTCGATTAGAGGTGTT
GATGGTCTGGGACTGACCAATGGCATCGC