Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00538.1
CDS Infomation

gene=orange1.1t00538
Sequence

ATGTTGCCAAGTAAAGTTAATAAGTCGTTGCAAAAGGGGCCCGCGCAAAAGCCAACCAAT
TTTAAGGGGCAATCCCATCTTCAGATTCCCACTTCCTTATCTTCTCTCATAGCCCTGTTA
TCCCGTATCATGGCGGCCACGCTTAGCCTTCTTAGACTTCCAATTCTTGCCCAGAATCAA
CAACACTCTCACTCCCAATCTGGCTCAAAGCTCTCCACCTCAACTCAACTAAACTGTATC
CGTAAAGACTCGAATAATCAACAAACACTCGTCAATGAGACCCTTGTTCGCTTCAAATCA
GCTGTTCTTCCCGTTACAACGATCACATTGCCATTCCTTTTAGATACAAAGGATGCGCTT
GCTGTTAATGGGGAATTTGGAATTTTGGAGGGCAGGAGTGTTGCACTTGTGCACCCCATT
GTTATGGGTAGTTTGCTCGTGTACACTCTCTGGGCCGGGTATCTGGGCTGGCAATGGAGG
CGGGTTCGGACTATCCAGACCGATATTAATGAGCTCAAGAAGCAAGTGAAGCCTACTCCA
GTTACTCCTGATGGAGCACCTGCGGAAACAGCCCCATCACCTGTTGAAATTAAAATTCAG
CAACTCACTGAGGAGAGGAAGGAGTTACTGAAAGGGTCTTACAGGGATAGACACTACAAT
GCAGGATCGATATTGTTAGGCTTTGGGGTGTTGGAGTCTGTTGGTGGAGGAGTCAACACT
TACTTGAGAGCAGGAAAGTTATTTCCAGGCCCCCATTTGTTTGCAGGAGCAGCCATTACT
GTGCTGTGGGCACTGGCGGCAGCTCTGGTACCTGCAATGCAGAAAGGGAGTGAGACTGCG
AGGAATCTTCACATTGCCTTGAATGCATTAAATATTCTGCTATTTATATGGCAAATTCCT
ACTGGAATTGATATCGTTTTTAAAGTGCTTGAGTTTACTAAATGGCCTTGA

Peptide Sequence

PEP ID

orange1.1t00538.1
PEP Infomation
Sequence

MLPSKVNKSLQKGPAQKPTNFKGQSHLQIPTSLSSLIALLSRIMAATLSLLRLPILAQNQ
QHSHSQSGSKLSTSTQLNCIRKDSNNQQTLVNETLVRFKSAVLPVTTITLPFLLDTKDAL
AVNGEFGILEGRSVALVHPIVMGSLLVYTLWAGYLGWQWRRVRTIQTDINELKKQVKPTP
VTPDGAPAETAPSPVEIKIQQLTEERKELLKGSYRDRHYNAGSILLGFGVLESVGGGVNT
YLRAGKLFPGPHLFAGAAITVLWALAAALVPAMQKGSETARNLHIALNALNILLFIWQIP
TGIDIVFKVLEFTKWP*

Transcript Sequence

Transcript ID

orange1.1t00538.1
Transcript Infomation

gene=orange1.1t00538 CDS=357-1307
Sequence

TTCCAATGTAACAACAACGACGCGCCCGCTTTGCTCAAAATATCTGGTGTTGGGGGATTG
CCCGAGTCCCACACAGCATTGCTCTTCTAATTATAATTCAACACGCGCACAGTGACGCAC
CAAAAAACGGAACCGCACACCCTCGATCATTATTACACATTTTCACGTGCTGCAGACTGC
TGTGCTGGGGCCTGTGCCCAAGTGCCCAAAACCAAAAGTGTTACAGAGTCCGGCCCAGCC
CACAACATTAATTTCCAGTTTCCCTCGCATGTACAGACTACAGACACGTCTCCTGACTTT
AGGGAGACTATTTTTCTCTGGTGCCACCTGGGGGAGAAACGTTTGATCCCATGTAGATGT
TGCCAAGTAAAGTTAATAAGTCGTTGCAAAAGGGGCCCGCGCAAAAGCCAACCAATTTTA
AGGGGCAATCCCATCTTCAGATTCCCACTTCCTTATCTTCTCTCATAGCCCTGTTATCCC
GTATCATGGCGGCCACGCTTAGCCTTCTTAGACTTCCAATTCTTGCCCAGAATCAACAAC
ACTCTCACTCCCAATCTGGCTCAAAGCTCTCCACCTCAACTCAACTAAACTGTATCCGTA
AAGACTCGAATAATCAACAAACACTCGTCAATGAGACCCTTGTTCGCTTCAAATCAGCTG
TTCTTCCCGTTACAACGATCACATTGCCATTCCTTTTAGATACAAAGGATGCGCTTGCTG
TTAATGGGGAATTTGGAATTTTGGAGGGCAGGAGTGTTGCACTTGTGCACCCCATTGTTA
TGGGTAGTTTGCTCGTGTACACTCTCTGGGCCGGGTATCTGGGCTGGCAATGGAGGCGGG
TTCGGACTATCCAGACCGATATTAATGAGCTCAAGAAGCAAGTGAAGCCTACTCCAGTTA
CTCCTGATGGAGCACCTGCGGAAACAGCCCCATCACCTGTTGAAATTAAAATTCAGCAAC
TCACTGAGGAGAGGAAGGAGTTACTGAAAGGGTCTTACAGGGATAGACACTACAATGCAG
GATCGATATTGTTAGGCTTTGGGGTGTTGGAGTCTGTTGGTGGAGGAGTCAACACTTACT
TGAGAGCAGGAAAGTTATTTCCAGGCCCCCATTTGTTTGCAGGAGCAGCCATTACTGTGC
TGTGGGCACTGGCGGCAGCTCTGGTACCTGCAATGCAGAAAGGGAGTGAGACTGCGAGGA
ATCTTCACATTGCCTTGAATGCATTAAATATTCTGCTATTTATATGGCAAATTCCTACTG
GAATTGATATCGTTTTTAAAGTGCTTGAGTTTACTAAATGGCCTTGATTTACATCTACTG
TATAAGAGATTGACCTACTAGATGTACTCTGTTTCGTAGTATTTTTGGTTGTAAATTTCA
ATGATATGATACATGTGGTTCAGATTGTAATCTCATGTATTCTTTCCTTGGATTGTGTAG
ATTGTATCATTTTCTGGGACACAGAATATAGTCAATGTTCTGTCCTAGCAGACTATTTTT
TCTGTTGTGCACTTAAATCAAAGTGCAAAATTGTGCATTGTATTTTGAGTCCCTCAAAAA
TGATGGAATTTTCATCGGTGTTTCTTTCATAATATAAGTAACAAGGTTGCATCAGTGAAG
GATACTGTTACTTATTGAATACTTCATA