Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00537.1
CDS Infomation

gene=orange1.1t00537
Sequence

ATGATGAGGGCGATAATCGTATTGTTGGTAATTGGTTGTTTATTGTTTATGATTCGCGTG
TTATTGTTCAAGACCGGTTTGATATTTGTGGCGAAAAAATGGTGGAGATTCATCGAAGAT
TGTTTGCACGTGCACCAGTTCTTCAAGGTACCAGAATTCAACGAAGGCATGCAGGAGAAT
CAACTCTACCGCAAAGTGTATGCTTATTTAAATTCTTTAACTTCAATCGAAGACTCAGAT
TTCACCAACCTCTTCACCGGCAAGAAATCAAACGACATCGTCCTCGGCCTCGATCCAAAC
CAGCTCATCCAAGACAATTTCCTCGGAGCTCCACTTTCTTGGGCCAACCAGGACGACTCC
GCCACCGCCAGAACCCTCGTTTTGAAGCTCAGGAAAGCCGACAGACGAAGAATCCTCCGC
CCTTATCTCCAACACATACACGCGGTTTCCGACGAGCTCGAGCAGAAGAAAAAGAGAGAT
TTGAGGCTCTTCGTCAATCTCAGAAACGATCGTGATGGCTGCTGCGGGCGGTGGAGATCT
GTTCCATTCACGCATCCCTCCACTTTTGACACGATTTCCATGGAGACCGATCTCAAAAAT
CGGGTCAAATCCGATCTTGAGTCTTTCCTCAAGGCCAAGCACTATTACCATCGGTTGGGC
CGTGTCTGGAAACGGAGTTATCTACTGTACGGCCCCTCCGGAACCGGGAAATCAAGCTTC
GCGGCTGCCATGGCTAGTTTCATGTCCTACGACGTGTACGATGTCGATCTTTCCAGAGTC
GCTGATGACGCGGATCTCAAATCCCTGTTACTGCAAACCACGAGCAAGTCGGTGATATTG
ATCGAGGATCTTGATCGGTTTCTGGTTGAGAAACCAGCGGCTGTGAGCTTATCGGGTGTA
TTGAACTTCATGGACGGGGTTTTGAATTCCTGCTGCTTCGAGGAGCGAGTGATGGTCTTC
ACGATGAACAGCAAAGATCACGTTGACCAGGCCCTTTTAAGACCCGGACGCATTGACGTT
CACATTCATTTTCCTCTGTGCGATTTTTCTTCGTTTAAAACACTAGCGAGCAGTTATTTA
GGGCTGAAAGATCACAAGTTGTTTCCTCAAGTGGAAGAGATCTTTCAAAACGGTTCGAGT
TTGAGCCCGGCGGAGATCGGCGAGCTGATGATTGCGAACCGGAACTCGCCTAGTCGGGCG
TTGAAATCGGTGATCACGGCTTTGCAAACCGACGGCGAGGGGAGGGGGGCAGCGAATGCC
GGACGGCGCTTGGATAAAAGCGGGTCAAAGAAGTCAACGGATGCCGATTCGGGTGAACAC
GGTGGGGTATTTAGCAGAGAAAATACTGTCAAGGAGTTTAGAAAGTTGTACGGTTTATTG
ACGTTGAAGAATAGTAGAAAATCTCAGTCGTTCGATTTGGCTGCAGCCGAAAACCATAGT
TGA

Peptide Sequence

PEP ID

orange1.1t00537.1
PEP Infomation
Sequence

MMRAIIVLLVIGCLLFMIRVLLFKTGLIFVAKKWWRFIEDCLHVHQFFKVPEFNEGMQEN
QLYRKVYAYLNSLTSIEDSDFTNLFTGKKSNDIVLGLDPNQLIQDNFLGAPLSWANQDDS
ATARTLVLKLRKADRRRILRPYLQHIHAVSDELEQKKKRDLRLFVNLRNDRDGCCGRWRS
VPFTHPSTFDTISMETDLKNRVKSDLESFLKAKHYYHRLGRVWKRSYLLYGPSGTGKSSF
AAAMASFMSYDVYDVDLSRVADDADLKSLLLQTTSKSVILIEDLDRFLVEKPAAVSLSGV
LNFMDGVLNSCCFEERVMVFTMNSKDHVDQALLRPGRIDVHIHFPLCDFSSFKTLASSYL
GLKDHKLFPQVEEIFQNGSSLSPAEIGELMIANRNSPSRALKSVITALQTDGEGRGAANA
GRRLDKSGSKKSTDADSGEHGGVFSRENTVKEFRKLYGLLTLKNSRKSQSFDLAAAENHS
*

Transcript Sequence

Transcript ID

orange1.1t00537.1
Transcript Infomation

gene=orange1.1t00537 CDS=429-1871
Sequence

TTTTAATGACTTCTTATTTAGGCTGGTTGGCTGGCTAGCAGCTAGCTACAATTTTGACGG
AGATACAAATAGCAATTTTATCTTATTTTATTTTATTTATTATTAATCGATCATCATCAT
CATCATCTCCAATTCTCCATCCTCTCCCCTCATATGCCGTCTAATAAATTAACACAATAG
GTTGATAAAATTAGTCGTCGTATTAATTAGTAGTTGTTGTAATTCGTCTCTCGTTCCTGC
CTCTACCTCTTTTTTGACATTGCCGGCAATCCGCCGCCGCCTGTCTCCTCTTTTAGGGAT
CATCTCTCATTTGATTGATTTGAACCGGGTTCCGTCGTTCGGTCTTCTTTTGAGAATTAA
TTCAATCTCAACATGAGTTAGGCTTTTGTGATTGTATAGCCAGCTGCTTGCCTCGTCAGT
CGTGAGTCATGATGAGGGCGATAATCGTATTGTTGGTAATTGGTTGTTTATTGTTTATGA
TTCGCGTGTTATTGTTCAAGACCGGTTTGATATTTGTGGCGAAAAAATGGTGGAGATTCA
TCGAAGATTGTTTGCACGTGCACCAGTTCTTCAAGGTACCAGAATTCAACGAAGGCATGC
AGGAGAATCAACTCTACCGCAAAGTGTATGCTTATTTAAATTCTTTAACTTCAATCGAAG
ACTCAGATTTCACCAACCTCTTCACCGGCAAGAAATCAAACGACATCGTCCTCGGCCTCG
ATCCAAACCAGCTCATCCAAGACAATTTCCTCGGAGCTCCACTTTCTTGGGCCAACCAGG
ACGACTCCGCCACCGCCAGAACCCTCGTTTTGAAGCTCAGGAAAGCCGACAGACGAAGAA
TCCTCCGCCCTTATCTCCAACACATACACGCGGTTTCCGACGAGCTCGAGCAGAAGAAAA
AGAGAGATTTGAGGCTCTTCGTCAATCTCAGAAACGATCGTGATGGCTGCTGCGGGCGGT
GGAGATCTGTTCCATTCACGCATCCCTCCACTTTTGACACGATTTCCATGGAGACCGATC
TCAAAAATCGGGTCAAATCCGATCTTGAGTCTTTCCTCAAGGCCAAGCACTATTACCATC
GGTTGGGCCGTGTCTGGAAACGGAGTTATCTACTGTACGGCCCCTCCGGAACCGGGAAAT
CAAGCTTCGCGGCTGCCATGGCTAGTTTCATGTCCTACGACGTGTACGATGTCGATCTTT
CCAGAGTCGCTGATGACGCGGATCTCAAATCCCTGTTACTGCAAACCACGAGCAAGTCGG
TGATATTGATCGAGGATCTTGATCGGTTTCTGGTTGAGAAACCAGCGGCTGTGAGCTTAT
CGGGTGTATTGAACTTCATGGACGGGGTTTTGAATTCCTGCTGCTTCGAGGAGCGAGTGA
TGGTCTTCACGATGAACAGCAAAGATCACGTTGACCAGGCCCTTTTAAGACCCGGACGCA
TTGACGTTCACATTCATTTTCCTCTGTGCGATTTTTCTTCGTTTAAAACACTAGCGAGCA
GTTATTTAGGGCTGAAAGATCACAAGTTGTTTCCTCAAGTGGAAGAGATCTTTCAAAACG
GTTCGAGTTTGAGCCCGGCGGAGATCGGCGAGCTGATGATTGCGAACCGGAACTCGCCTA
GTCGGGCGTTGAAATCGGTGATCACGGCTTTGCAAACCGACGGCGAGGGGAGGGGGGCAG
CGAATGCCGGACGGCGCTTGGATAAAAGCGGGTCAAAGAAGTCAACGGATGCCGATTCGG
GTGAACACGGTGGGGTATTTAGCAGAGAAAATACTGTCAAGGAGTTTAGAAAGTTGTACG
GTTTATTGACGTTGAAGAATAGTAGAAAATCTCAGTCGTTCGATTTGGCTGCAGCCGAAA
ACCATAGTTGATCGTGTGGTTCATATTTTGTAATCGACGATGTAAAAAATTGGCACCATG
GTAAGCTTTAATTTGAGGGTGGTGATTATACATAGGAACAACATAAATTAATAGATACGA
TATTCTATTTTTCATCTTTAATTTGTTGCCTTGATGTTTTTGTTGAAATCGATTAATTTC
TCTCTTCAAAATATGTATCTTAATAATATGTACTCAAAAACCCAGATATATAGTGCGCCC
CATTGAGTGAGGGGGCTGAAATTAGAGATCGGTGCTGATCTTTTTTGCAAGTGGTCCGAA
CCACTGACTACTAGAACTGAGTCACTGAACCTCTATGATTTAGTAGGGAAATTCGTCCAT
TACTCTATTCTCGTTGCGATGCTGCTCCTTTTCTGCTACGGATTGCCAAGGAGTTTTCAT
CATTTTCTAACTATTCTTGTGGTAGTCATCTTTTCTTTAGACACATACTGTTGGACCAAA
GCATAGCCAAGAATCATGAATGTGGCTGTACGTGGAACATAGTTCATTATTCGTTACCCA
AAATTAAAAAAATGAATGTGAGGAGGGTTTGTCTCATTGGCTGTCAACTTCTTCTTCTTT
TTTTTTTTTTTAATTTTTATAGT