Gene sequences

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Trait-Related Loci

Citrus sinensis

CDS Sequence

CDS ID	orange1.1t00535.3
CDS Infomation	gene=orange1.1t00535
Sequence	ATGATGGCACTGGATGTGGTTACTAGTGCTTCAACTGTTCCAGCTTCGGAAGCGCTTTCT CAGATTGTAGAGGCCATTCTAGAGGTGATGATTGCTTCTAATAATGTTCTCATTAAGAAG GAGAGTTTTAAGGAACTTGCAGCTTATTTGGAAAGGATTGTCCCAGTCCTAAAAGAGCTG AATAAAAGAGATCTCAGTCATTCTGAGGGCTTAAATAGTGCTATAGAGATTCTCAATCGA GAAATAAAAGGTGCAAAGGAACTTACGACAGAGTGCAGCAAGAGAAACAAAGTGTATCTC TTAATGAATTGCCGGGCAATAGTTAAGCGCTTAAAGGACACTGCTAGAGAGATCAGCCAG GCACTAGGTATCCTTCCTTTGGCCTCCCTAGATCTTTCAACAGATATAATTGAAGAGATT GAGAAGGTCTGTGACAATATGCAGAGAGCTGAATTTAGGGCAGCTATAGCTGAAGAAGAA ATTTTGGAGAAAGTTGAGTCTGGAATACAGGAAAGGAATGTTGATCGTTCTTATGCCAAT CATTTACTATCTCTGATAGCAGATGCTGTTGGTATCTCAACTGAGAGGTCAGCGTTGAAA AAGGAATTTGATGAATTCAAGAGTGAGATTGAAAATTCCCGGATGAGAAAGGATCAAGCA GAGGCTGTACAAATGGATCAGATTATTGCTTTACTAGAAAGGGCCGATGCAGCTTCATCT CCAAGGGAGAAGGAGATGAAGTATTTCTCCAAGCGGAAGTCTTTGGGTAGCCAGCCTTTG GAACCTCTCCAATCATTTTATTGCCCAATCACGCGGGATGTCATGGTGGACCCTGTGGAG ACTTCTTCGGGACAGACATTTGAGAGAAGTGCTATAGAAAAATGGTTTTCAGATGGGAAC AACTTGTGTCCCCTAACCATGACTGTTCTAGACACATCAATTCTAAGGCCAAATAAAACC CTGAGGCAATCGATTGAAGAATGGAAGGATAGAAACACCATGATTACAATTGCTTCCATG AAACCAAAACTCGTGTCCACGGAGGTTGAAGAAGTGCTTCATTGCCTGGAACAGCTACAA GATCTCTGTCAACAAAGAGACCAGCACCGGGAATGGGTAATATTGGAGAACTACATACCA AAACTTATTTATTTACTTGGTTCCAAAAATCGTGATGTAAGGAATCGTGCTCTTATCATT CTTCACATTTTGGTAAAAGATAGCAATGATACTAAGGAAAGACTCGCAAATGGTGATGAT GCAGTTGAATCTATTGTTCGATCTCTTGGGCGTCGTATTGAGGAAAGGAAGTTGGCAGTT GCATTACTTTTGGAATTATCCACTTGTAATACATTACGAGACCAGATTGGGGACGTTCAG GGCTGCATTCTCCTCTTGGTGACTATGGCAAGCAGTGATGACAATCAAGCTTCCAGAGAT GCACAAGAACTATTGGAGAACCTCTCATTCTCTGACGATAATGTGGTTCAGATGGCAAAA GCAAATTATTTTAAACATTTGCTTCAACGGCTTTCTGCAGGACCTGAAAGTGTAAAAATG CGCATGGCAACAACCTTGGCTGAAATGGAGTTGACTGACCACCACAAAGCATCTTTGCTT GAAGGAAATGTACTGGGTCCACTTCTTCACTTGGTTTCTCGTGGTGACATTCAAATGAAA AAAGTGGCCGTTAAAGCTCTTCGGAATCTTTCAAGTGTGCCCCAAAATGGATTGCAGATG ATAAAAGAAGGTGCTGTTGGACCGTTAGTAGATCTTCTCCTTCATCACAGCTCATCATCC TCTAGCTTACGTGAAGAGACAGCAACTGCAATTATGCATCTTGCAGTATCAACCATGTAC CAAGAGTCCAGCCAGACACCAGTTACGCTGCTGGAATCTGATAAAGAAATTTTTATGCTC TTCTCTTTAATTAATTTGACCGGGCCAAATGTGCAACAAAGAATTTTACAAACCTTCAAT GCTTTGTGTCGATCTCCTTCTGCAGGAAATATCAAGACCACATTAACACAGTGTTCGGCT ATTCCAGTTCTAGTTCAGCTATGTGAGCATGATAACGAAAATGTCAGAGCAAATGCAGTG AAGTTGTTCTGTTGCTTGGTAGATGATGGAGATGAAGCAATCATCCGGGAGCATGTGGGT CAGAAATGCCTTGAGACCTTAGTCACCATCATCCAATCTTCTCACAATGAGGAAGAGATT GCCTCCGCAATGGGAATTCTCTCTAAACTTCCGGAAGTACCTCAATTCACTCAGTGGCTT CTGGATGCCGGTGCACTTCCGATTGTTTTAAATTTTCTGAAAAATGGAAGGCAGAATGAT CCAAATAGATTTCAAGTCGTTGAAAATGCTGTTGGAGCCTTACGGCGTTTCACTGCTCCG ACAAACTTGGAATGGCAAAAGAGAGCAGCTGAAGCTGGTGTTATTCCCAAGTTGGTTCAG TTACTAGAGTATGGAACCACCCTGACAAAAGAACATGCAGCCACGTCTCTTGCTCGTTTT TCAAAAAATTCCCTTGGGCTAAGTCGACCAATACCGAAGCGTAAGGGGTTCTGGTGTTTC TCACCTCCACCAGAAATTGGCTGCCAGGTTCATGGAGGATTATGTGGCATTGAATCATCT TTTTGCCTTTTGGAGGCTAATGCAGTTAGACCACTTGTTAGGGTTCTTGAAGATCCAGAT CATGGGGCCTGTGAGGCTTCTTTAGATGCATTAGTAACATTAATTGAAGGTGAAAGACTA CAGAATGGCAGCAAGGTGCTTGAAGATGCAAATGCCATAGACCGTATGGTAAGATTTCTT AGTTCACCCTCTCCAAAATTGCAGGAGAAGGCTCTGGATTCTGTAGAAAGGATTTTCCGA CTGCCAGAGTTTAAACAAAAGTACGGGAAATCTGCTCAGATGCCGTTGGTCGACTTAACA CAACGAGGCAACAGTAGTATGAAGTCTCTTTCAGCCAGAGTACTGGCTCATTTGAATGTG CTCCAAGATCAGTCTTCTTATTTCTAA

Peptide Sequence

PEP ID	orange1.1t00535.3
PEP Infomation
Sequence	MMALDVVTSASTVPASEALSQIVEAILEVMIASNNVLIKKESFKELAAYLERIVPVLKEL NKRDLSHSEGLNSAIEILNREIKGAKELTTECSKRNKVYLLMNCRAIVKRLKDTAREISQ ALGILPLASLDLSTDIIEEIEKVCDNMQRAEFRAAIAEEEILEKVESGIQERNVDRSYAN HLLSLIADAVGISTERSALKKEFDEFKSEIENSRMRKDQAEAVQMDQIIALLERADAASS PREKEMKYFSKRKSLGSQPLEPLQSFYCPITRDVMVDPVETSSGQTFERSAIEKWFSDGN NLCPLTMTVLDTSILRPNKTLRQSIEEWKDRNTMITIASMKPKLVSTEVEEVLHCLEQLQ DLCQQRDQHREWVILENYIPKLIYLLGSKNRDVRNRALIILHILVKDSNDTKERLANGDD AVESIVRSLGRRIEERKLAVALLLELSTCNTLRDQIGDVQGCILLLVTMASSDDNQASRD AQELLENLSFSDDNVVQMAKANYFKHLLQRLSAGPESVKMRMATTLAEMELTDHHKASLL EGNVLGPLLHLVSRGDIQMKKVAVKALRNLSSVPQNGLQMIKEGAVGPLVDLLLHHSSSS SSLREETATAIMHLAVSTMYQESSQTPVTLLESDKEIFMLFSLINLTGPNVQQRILQTFN ALCRSPSAGNIKTTLTQCSAIPVLVQLCEHDNENVRANAVKLFCCLVDDGDEAIIREHVG QKCLETLVTIIQSSHNEEEIASAMGILSKLPEVPQFTQWLLDAGALPIVLNFLKNGRQND PNRFQVVENAVGALRRFTAPTNLEWQKRAAEAGVIPKLVQLLEYGTTLTKEHAATSLARF SKNSLGLSRPIPKRKGFWCFSPPPEIGCQVHGGLCGIESSFCLLEANAVRPLVRVLEDPD HGACEASLDALVTLIEGERLQNGSKVLEDANAIDRMVRFLSSPSPKLQEKALDSVERIFR LPEFKQKYGKSAQMPLVDLTQRGNSSMKSLSARVLAHLNVLQDQSSYF*

Transcript Sequence

Transcript ID	orange1.1t00535.3
Transcript Infomation	gene=orange1.1t00535 CDS=294-3320
Sequence	TTTTGATTCGGCAATTTTATTTTTCTTGGTCCTCCATATTCTCAGAAACTAATTTGTGGC TTATAGGACGAATTCATTTTTAGACTCTCGAGTCGTGATTATTCCAATCAAATTGCTGGC TGACTTATTTCAAATTGGAACTGAATGTAGGCATATCAAGTGAAAGTTTAGCAGGGTGAT TTAGGCATCAGACAGTCGACAATTGCCATACAATTTGACTCCTGCCATTTGTAGTTGCTA TTGGCATGGAAAGAGAAGGTTTTGCTGCCTAGCTTTTGCTGGGTTGTTTTGATATGATGG CACTGGATGTGGTTACTAGTGCTTCAACTGTTCCAGCTTCGGAAGCGCTTTCTCAGATTG TAGAGGCCATTCTAGAGGTGATGATTGCTTCTAATAATGTTCTCATTAAGAAGGAGAGTT TTAAGGAACTTGCAGCTTATTTGGAAAGGATTGTCCCAGTCCTAAAAGAGCTGAATAAAA GAGATCTCAGTCATTCTGAGGGCTTAAATAGTGCTATAGAGATTCTCAATCGAGAAATAA AAGGTGCAAAGGAACTTACGACAGAGTGCAGCAAGAGAAACAAAGTGTATCTCTTAATGA ATTGCCGGGCAATAGTTAAGCGCTTAAAGGACACTGCTAGAGAGATCAGCCAGGCACTAG GTATCCTTCCTTTGGCCTCCCTAGATCTTTCAACAGATATAATTGAAGAGATTGAGAAGG TCTGTGACAATATGCAGAGAGCTGAATTTAGGGCAGCTATAGCTGAAGAAGAAATTTTGG AGAAAGTTGAGTCTGGAATACAGGAAAGGAATGTTGATCGTTCTTATGCCAATCATTTAC TATCTCTGATAGCAGATGCTGTTGGTATCTCAACTGAGAGGTCAGCGTTGAAAAAGGAAT TTGATGAATTCAAGAGTGAGATTGAAAATTCCCGGATGAGAAAGGATCAAGCAGAGGCTG TACAAATGGATCAGATTATTGCTTTACTAGAAAGGGCCGATGCAGCTTCATCTCCAAGGG AGAAGGAGATGAAGTATTTCTCCAAGCGGAAGTCTTTGGGTAGCCAGCCTTTGGAACCTC TCCAATCATTTTATTGCCCAATCACGCGGGATGTCATGGTGGACCCTGTGGAGACTTCTT CGGGACAGACATTTGAGAGAAGTGCTATAGAAAAATGGTTTTCAGATGGGAACAACTTGT GTCCCCTAACCATGACTGTTCTAGACACATCAATTCTAAGGCCAAATAAAACCCTGAGGC AATCGATTGAAGAATGGAAGGATAGAAACACCATGATTACAATTGCTTCCATGAAACCAA AACTCGTGTCCACGGAGGTTGAAGAAGTGCTTCATTGCCTGGAACAGCTACAAGATCTCT GTCAACAAAGAGACCAGCACCGGGAATGGGTAATATTGGAGAACTACATACCAAAACTTA TTTATTTACTTGGTTCCAAAAATCGTGATGTAAGGAATCGTGCTCTTATCATTCTTCACA TTTTGGTAAAAGATAGCAATGATACTAAGGAAAGACTCGCAAATGGTGATGATGCAGTTG AATCTATTGTTCGATCTCTTGGGCGTCGTATTGAGGAAAGGAAGTTGGCAGTTGCATTAC TTTTGGAATTATCCACTTGTAATACATTACGAGACCAGATTGGGGACGTTCAGGGCTGCA TTCTCCTCTTGGTGACTATGGCAAGCAGTGATGACAATCAAGCTTCCAGAGATGCACAAG AACTATTGGAGAACCTCTCATTCTCTGACGATAATGTGGTTCAGATGGCAAAAGCAAATT ATTTTAAACATTTGCTTCAACGGCTTTCTGCAGGACCTGAAAGTGTAAAAATGCGCATGG CAACAACCTTGGCTGAAATGGAGTTGACTGACCACCACAAAGCATCTTTGCTTGAAGGAA ATGTACTGGGTCCACTTCTTCACTTGGTTTCTCGTGGTGACATTCAAATGAAAAAAGTGG CCGTTAAAGCTCTTCGGAATCTTTCAAGTGTGCCCCAAAATGGATTGCAGATGATAAAAG AAGGTGCTGTTGGACCGTTAGTAGATCTTCTCCTTCATCACAGCTCATCATCCTCTAGCT TACGTGAAGAGACAGCAACTGCAATTATGCATCTTGCAGTATCAACCATGTACCAAGAGT CCAGCCAGACACCAGTTACGCTGCTGGAATCTGATAAAGAAATTTTTATGCTCTTCTCTT TAATTAATTTGACCGGGCCAAATGTGCAACAAAGAATTTTACAAACCTTCAATGCTTTGT GTCGATCTCCTTCTGCAGGAAATATCAAGACCACATTAACACAGTGTTCGGCTATTCCAG TTCTAGTTCAGCTATGTGAGCATGATAACGAAAATGTCAGAGCAAATGCAGTGAAGTTGT TCTGTTGCTTGGTAGATGATGGAGATGAAGCAATCATCCGGGAGCATGTGGGTCAGAAAT GCCTTGAGACCTTAGTCACCATCATCCAATCTTCTCACAATGAGGAAGAGATTGCCTCCG CAATGGGAATTCTCTCTAAACTTCCGGAAGTACCTCAATTCACTCAGTGGCTTCTGGATG CCGGTGCACTTCCGATTGTTTTAAATTTTCTGAAAAATGGAAGGCAGAATGATCCAAATA GATTTCAAGTCGTTGAAAATGCTGTTGGAGCCTTACGGCGTTTCACTGCTCCGACAAACT TGGAATGGCAAAAGAGAGCAGCTGAAGCTGGTGTTATTCCCAAGTTGGTTCAGTTACTAG AGTATGGAACCACCCTGACAAAAGAACATGCAGCCACGTCTCTTGCTCGTTTTTCAAAAA ATTCCCTTGGGCTAAGTCGACCAATACCGAAGCGTAAGGGGTTCTGGTGTTTCTCACCTC CACCAGAAATTGGCTGCCAGGTTCATGGAGGATTATGTGGCATTGAATCATCTTTTTGCC TTTTGGAGGCTAATGCAGTTAGACCACTTGTTAGGGTTCTTGAAGATCCAGATCATGGGG CCTGTGAGGCTTCTTTAGATGCATTAGTAACATTAATTGAAGGTGAAAGACTACAGAATG GCAGCAAGGTGCTTGAAGATGCAAATGCCATAGACCGTATGGTAAGATTTCTTAGTTCAC CCTCTCCAAAATTGCAGGAGAAGGCTCTGGATTCTGTAGAAAGGATTTTCCGACTGCCAG AGTTTAAACAAAAGTACGGGAAATCTGCTCAGATGCCGTTGGTCGACTTAACACAACGAG GCAACAGTAGTATGAAGTCTCTTTCAGCCAGAGTACTGGCTCATTTGAATGTGCTCCAAG ATCAGTCTTCTTATTTCTAAAGAACTTTTAGTAGGTTGAACCAATTTGAATTTTATAGAA ATTTTTGCGCTGATGAGATAATGATGGCGTACCTCTCCTTGATGCTTTCACAAAGGCAGC ACCCAGAATCATCGAACAATTGGAGGATGACTTGCGCGTGCAAAAGCATGAGAGTTTGCA TGTCTAAATCTGAACAGAGCATGCCTTTCATCTTAGGACAGGACATGATGGTGGTTCATT TCAAAGCCAATACCAATGTAGTTTTCTGAAACGACTTCTTATTTAAGAAGAACATTTGCA GTGTGTCCTTCTGGTGGTAATGAAAACCATTATTGGAGGGGTGAGATTCCATTATTTTAG CGCCGTAAGGTTTGATCTTGTCTGTACAGTTGAATTGAAGCCCAATTGGTAATTGATTTC ATTGGAGGAGGAGAAAAGTCGGCGTTAATGTCCCCAATATTAGACTATTATTCATAGTGA ATTTTATTTTTTCAGAGCTGGATTCTTTTCCTACCTCCTTTTCTTTCTTTGTGTTATAGC CTCTGCAATAATCCGCGTGTATGCTATCACAAGTCTTCTAATGAAATACTTTGTGATTTT GTGAAAG