Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00526.1
CDS Infomation

gene=orange1.1t00526
Sequence

ATGATTACTGAGCTCTTCACTTCTGGAAATCTGCGGCAATATCGTAAGAAGCACAAAAAT
GTTGATATAAAGGTCATAAAGAACTGGGCAAGGCAGATTCTTCATGGTTTAGTCTATCTC
CACAGTCACAATCCACCGATTATTCATAGGGACTTAAAATGTGACAATATCTTTGTTAAT
GGCAATCACGGAGAGGTTAAAATTGGAGACCTCGGATTGGCAATTGCCATGCAACAGCCT
ACCGCCAGAAGTGTCATTGGAACTCCTGAATTTATGGCTCCAGAGCTGTATGAGGAGGAA
TATAATGAACTTGTTGACATTTATTCTTTTGGGATGTGCATATTAGAGATGGTTACTTTT
GAGTATCCATATAGCGAATGCAAAAATCCAGCTCAAATTTTTAAGAAGGTTACCTCTGGC
ATCAAACCTGCCTCTCTTGCTAAGGTGAATGATCCCCAAATTAAGGGATTTATTGAGAAA
TGTCTGGTTCCGGCCTCTGAGAGATTGTCTGCAAAAGATCTTTTGAAAGATCCATTCCTG
CAAGTGGAGAATCAAAAGGAACCTATTTGCGATCCCCTGAAGTTACCTATTCAAAGTCTG
AAAATGTTACGTTTACCCATGTCTGGACCCTCTTCCATGGATATAGACTCAGACTATAAG
CAGCTCTCTTTAAGCACATGTACAGAAAGCAACAATGGAAGCCCACATTGTCCAGTTTTG
GAATTTCAGAGGATGCATAAGAACAATGAGTTTAGGCTGAGAGGGACAAAAAATGATGAC
ACCTCTGTATCATTGACCTTGCGTATTGCTGACTCATCAGGTCGGGTGAGGAATATACAT
TTCCTCTTTTACCTTGACAGTGATACTGCACTGTCAGTGGCAGGAGAGATGGTTGAACAA
CTAGACTTGGCGGATCATGATGTGGCCTTCATAGCTGAATTTATTGATTACTTGATAATG
AAACTATTGCCTGGTTGGAAACCCTCATATGATTATTCCTCCAGTGGAGCATTAAGTTTC
TATAGTGTGTCTCCCATCCTGGGAAACGGCAAAACCTCAACACCATCCCCATGGGATGCA
ATGGGCGCTGGTGTTCCTTCTGAGTTTGTGGTTAAGCAAGATGTTGTCTCTGGGCCTACT
AGAAATCCTTCCCAAGATCTTGCACCAGCACAAGGTGAAAACCTTCATGATAACGCCGGT
GGAGGAGGTATTTCTTCTCCAAGTTTGGCCAAATTGGAAGATCAAGAGTCACAATCGTCA
GTTGCTTCAGATATTTTTGTTGACGATACTTCCACAAAAAATGATAAAGCATCTGAATTT
TCTGACTACAGTACTGATAGAAGCTATAAGGACTTGAATGGTTATGTATCTGAGTTAGAA
CTAGGGGATTTGTGTTATGATGAGTGTAAATTGCAAGGAAACTATAGCGAGGATGGAGAA
GACATCTTACTTTACCAATTTGTGAAAAATTCAAAGCTGACGTTCCCCAACCTGAGCACA
GTATTGAGCTTGACAAGCAGCTATTCATCTCTGTCCTTGACTGGCAAAGATGTAGATGAG
CTAAAGATGGAAATCGATGCAATTGAGGCTCAATATGAGCACTGGTTCCAAGAATTATCT
AAGATGAAAGAAGAGGCATTGGAGGCCTCCAGAAAGAGATGGATGGCAAAGAAGAGGCTG
CCCGTTAATTGA

Peptide Sequence

PEP ID

orange1.1t00526.1
PEP Infomation
Sequence

MITELFTSGNLRQYRKKHKNVDIKVIKNWARQILHGLVYLHSHNPPIIHRDLKCDNIFVN
GNHGEVKIGDLGLAIAMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMVTF
EYPYSECKNPAQIFKKVTSGIKPASLAKVNDPQIKGFIEKCLVPASERLSAKDLLKDPFL
QVENQKEPICDPLKLPIQSLKMLRLPMSGPSSMDIDSDYKQLSLSTCTESNNGSPHCPVL
EFQRMHKNNEFRLRGTKNDDTSVSLTLRIADSSGRVRNIHFLFYLDSDTALSVAGEMVEQ
LDLADHDVAFIAEFIDYLIMKLLPGWKPSYDYSSSGALSFYSVSPILGNGKTSTPSPWDA
MGAGVPSEFVVKQDVVSGPTRNPSQDLAPAQGENLHDNAGGGGISSPSLAKLEDQESQSS
VASDIFVDDTSTKNDKASEFSDYSTDRSYKDLNGYVSELELGDLCYDECKLQGNYSEDGE
DILLYQFVKNSKLTFPNLSTVLSLTSSYSSLSLTGKDVDELKMEIDAIEAQYEHWFQELS
KMKEEALEASRKRWMAKKRLPVN*

Transcript Sequence

Transcript ID

orange1.1t00526.1
Transcript Infomation

gene=orange1.1t00526 CDS=695-2386
Sequence

CCATTTCAAACTTTAATCAAACGCTTTTGCTAACTACTTAGCTTCTTTTCTCACGTCTCC
AAATTTGCCTTATAAATTTTTATTTTTTATTAAATAAAAATAAAAATAAAAATTAGATTT
AATTATTTTGGAGCAAAATGTTATTGGAGAATTGGATAAAGTTGGGTTTGGTATGAGAAT
GACGGATTTGAATTGCGGAGGGGACAGTGGGGTTATGAATAGTCAAGATTATTCATCGCC
TCTGGAAAACGACATCGTAATCGAATGCCGCTTCCGTTTGAAATCGGCGGCATTCGATTC
CTTTTGGATTGCCTCCGAATCATTCTCCGACTACAAACGTCGCCGTTTCACCCCCAATTC
CTAAAAACGAAAAATATTAAACCCATAATTGCCGTTTTCTTTTTGGTAGCTGTTTGGTTC
TTGTCAGGAATGTTGGGAACAGCAGAGCCACCCGATGCGGATTCTGATTTCGTCGAGAAG
GATCCCAGCGGTCGATACGTAAGGTTACAAGGCATTTGATGAATTCGCTGGGATAGAAGT
TGCTTGGAGCCGAGTGAAGATTGATGATGTCTTGCAGTTGCCAGGAGATTTGCAAAAATT
GTATTCAGAGGTTCATTTGCTGAAATCTCTGAAAGATGATAATGTTGTTAAGTTTTATAA
GTCATGGGTGGATGACAAGAAGAAAACTGTTAACATGATTACTGAGCTCTTCACTTCTGG
AAATCTGCGGCAATATCGTAAGAAGCACAAAAATGTTGATATAAAGGTCATAAAGAACTG
GGCAAGGCAGATTCTTCATGGTTTAGTCTATCTCCACAGTCACAATCCACCGATTATTCA
TAGGGACTTAAAATGTGACAATATCTTTGTTAATGGCAATCACGGAGAGGTTAAAATTGG
AGACCTCGGATTGGCAATTGCCATGCAACAGCCTACCGCCAGAAGTGTCATTGGAACTCC
TGAATTTATGGCTCCAGAGCTGTATGAGGAGGAATATAATGAACTTGTTGACATTTATTC
TTTTGGGATGTGCATATTAGAGATGGTTACTTTTGAGTATCCATATAGCGAATGCAAAAA
TCCAGCTCAAATTTTTAAGAAGGTTACCTCTGGCATCAAACCTGCCTCTCTTGCTAAGGT
GAATGATCCCCAAATTAAGGGATTTATTGAGAAATGTCTGGTTCCGGCCTCTGAGAGATT
GTCTGCAAAAGATCTTTTGAAAGATCCATTCCTGCAAGTGGAGAATCAAAAGGAACCTAT
TTGCGATCCCCTGAAGTTACCTATTCAAAGTCTGAAAATGTTACGTTTACCCATGTCTGG
ACCCTCTTCCATGGATATAGACTCAGACTATAAGCAGCTCTCTTTAAGCACATGTACAGA
AAGCAACAATGGAAGCCCACATTGTCCAGTTTTGGAATTTCAGAGGATGCATAAGAACAA
TGAGTTTAGGCTGAGAGGGACAAAAAATGATGACACCTCTGTATCATTGACCTTGCGTAT
TGCTGACTCATCAGGTCGGGTGAGGAATATACATTTCCTCTTTTACCTTGACAGTGATAC
TGCACTGTCAGTGGCAGGAGAGATGGTTGAACAACTAGACTTGGCGGATCATGATGTGGC
CTTCATAGCTGAATTTATTGATTACTTGATAATGAAACTATTGCCTGGTTGGAAACCCTC
ATATGATTATTCCTCCAGTGGAGCATTAAGTTTCTATAGTGTGTCTCCCATCCTGGGAAA
CGGCAAAACCTCAACACCATCCCCATGGGATGCAATGGGCGCTGGTGTTCCTTCTGAGTT
TGTGGTTAAGCAAGATGTTGTCTCTGGGCCTACTAGAAATCCTTCCCAAGATCTTGCACC
AGCACAAGGTGAAAACCTTCATGATAACGCCGGTGGAGGAGGTATTTCTTCTCCAAGTTT
GGCCAAATTGGAAGATCAAGAGTCACAATCGTCAGTTGCTTCAGATATTTTTGTTGACGA
TACTTCCACAAAAAATGATAAAGCATCTGAATTTTCTGACTACAGTACTGATAGAAGCTA
TAAGGACTTGAATGGTTATGTATCTGAGTTAGAACTAGGGGATTTGTGTTATGATGAGTG
TAAATTGCAAGGAAACTATAGCGAGGATGGAGAAGACATCTTACTTTACCAATTTGTGAA
AAATTCAAAGCTGACGTTCCCCAACCTGAGCACAGTATTGAGCTTGACAAGCAGCTATTC
ATCTCTGTCCTTGACTGGCAAAGATGTAGATGAGCTAAAGATGGAAATCGATGCAATTGA
GGCTCAATATGAGCACTGGTTCCAAGAATTATCTAAGATGAAAGAAGAGGCATTGGAGGC
CTCCAGAAAGAGATGGATGGCAAAGAAGAGGCTGCCCGTTAATTGA