Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00502.1
CDS Infomation

gene=orange1.1t00502
Sequence

ATGGAAGGGAAAGCAAGAAACCATCTTCTCCTTCTCTTCTCCTTCTTCTTCACCGCCGCT
GCCTCTCTCCAGTATCAAACCTTCGTCCTTAACTCTCTCCCTACCCCATCCACTCTCTCT
TGGCCTGAATCCGTATCCGTTTCCGAATCCGAATCTTCACTCCCTCTACCAGCACCTGAC
GCAGAATCCTCGCTCTCCCTACGTTTACATCACGTAGACTCTCTGTCCTTCAACAGAACT
CCAGAGCACCTCTTCAACCTCCGCATCCAACGCGACGTCTTACGTGTCAAATCCTTAACC
GCCTTCGCTGAATCTGCCGTTCGTGTTCCCCCGCGCAACCGCTCCCGCGGGCGTGCCAAC
GGAGGCTTTAGTAGCTCCGTCATATCAGGGCTCGCACAAGGCAGCGGCGAGTACTTCACG
CGCCTCGGAGTTGGCACACCCCCTAGGTATGTCTACATGGTCTTAGACACCGGTAGCGAC
GTCGTTTGGATACAGTGCGCTCCGTGCAAGAAATGCTACTCTCAAACCGACCCTGTCTTC
GACCCTGCCAAGTCCCGCTCGTTTGCTACCGTACCCTGTCGGTCCCCTTTGTGCCGCAAG
CTCGACTCTTCTGGCTGTAACCGCAGGAACACGTGTCTTTACCAAGTCTCCTACGGAGAC
GGTTCTATCACCGTCGGTGATTTTTCCACTGAAACGCTGACGTTTCGTGGCACCAGAGTT
GCGCGCGTGGCCCTCGGTTGTGGACACGACAATGAGGGCCTCTTCGTTGCTGCTGCGGGC
TTATTGGGGCTCGGTCGTGGGAGGTTGTCATTTCCAACTCAAACCGGTCGCCGGTTCAAC
CGTAAGTTTTCTTACTGTTTAGTGGACCGATCCACTTCTGCTAAACCTTCATCGATGGTA
TTCGGTGACTCGGCCGTTTCACGAACCGCCCGGTTCACTCCGTTACTCGCAAACCCTAAG
CTCGACACATTCTACTATGTTGAACTAGTTGGAATCAGCGTCGGCGGTGCTCATGTCCGC
GGCATCACTGCTTCTTTGTTCAAACTCGATCCGGCCGGTAACGGTGGGGTCATCATAGAC
TCGGGTACGTCTGTGACCCGTTTGACCCGACCCGCTTACATCGCATTGCGTGATGCTTTC
CGAGCTGGAGCATCCTCCTTGAAGCGTGCGCCAGACTTTTCGCTGTTTGATACGTGCTTC
GATTTGTCGGGAAAGACGGAAGTGAAGGTGCCCACGGTGGTGTTGCATTTCAGAGGTGCA
GATGTGTCGTTGCCGGCGACTAATTATCTAATACCCGTGGATAGTAGCGGAACATTTTGC
TTTGCATTTGCAGGAACCATGAGCGGGTTGTCGATAATTGGAAATATTCAGCAACAGGGC
TTCCGGGTTGTTTATGACTTGGCCGCTTCACGGATCGGGTTTGCTCCGCGCGGGTGCGCT
TGA

Peptide Sequence

PEP ID

orange1.1t00502.1
PEP Infomation
Sequence

MEGKARNHLLLLFSFFFTAAASLQYQTFVLNSLPTPSTLSWPESVSVSESESSLPLPAPD
AESSLSLRLHHVDSLSFNRTPEHLFNLRIQRDVLRVKSLTAFAESAVRVPPRNRSRGRAN
GGFSSSVISGLAQGSGEYFTRLGVGTPPRYVYMVLDTGSDVVWIQCAPCKKCYSQTDPVF
DPAKSRSFATVPCRSPLCRKLDSSGCNRRNTCLYQVSYGDGSITVGDFSTETLTFRGTRV
ARVALGCGHDNEGLFVAAAGLLGLGRGRLSFPTQTGRRFNRKFSYCLVDRSTSAKPSSMV
FGDSAVSRTARFTPLLANPKLDTFYYVELVGISVGGAHVRGITASLFKLDPAGNGGVIID
SGTSVTRLTRPAYIALRDAFRAGASSLKRAPDFSLFDTCFDLSGKTEVKVPTVVLHFRGA
DVSLPATNYLIPVDSSGTFCFAFAGTMSGLSIIGNIQQQGFRVVYDLAASRIGFAPRGCA
*

Transcript Sequence

Transcript ID

orange1.1t00502.1
Transcript Infomation

gene=orange1.1t00502 CDS=292-1734
Sequence

CCGGGATTTTACCATCCCCAGTAAAGAGAGAGCACCGCACATAATAAATCCAAATGTAAA
AAAAAAAAAAAGGTTATTGACCCAAACCCCACCAACGGCCAACGGCCCACCCCTCAAAAC
GTGATAAGTGATAACGGGACTTTGAATCTTTGATTACCAGTATACCTCCTCCACCACTGT
TTCTTTCAACAGTTATAAGTAACAATAATAATATTGTATCACCCTCATCAGTCTCTCTCG
CACTCCAAAAGCAAAACACTCTGCTGTCCCTCAACTCTCCCTTCAATTTCAATGGAAGGG
AAAGCAAGAAACCATCTTCTCCTTCTCTTCTCCTTCTTCTTCACCGCCGCTGCCTCTCTC
CAGTATCAAACCTTCGTCCTTAACTCTCTCCCTACCCCATCCACTCTCTCTTGGCCTGAA
TCCGTATCCGTTTCCGAATCCGAATCTTCACTCCCTCTACCAGCACCTGACGCAGAATCC
TCGCTCTCCCTACGTTTACATCACGTAGACTCTCTGTCCTTCAACAGAACTCCAGAGCAC
CTCTTCAACCTCCGCATCCAACGCGACGTCTTACGTGTCAAATCCTTAACCGCCTTCGCT
GAATCTGCCGTTCGTGTTCCCCCGCGCAACCGCTCCCGCGGGCGTGCCAACGGAGGCTTT
AGTAGCTCCGTCATATCAGGGCTCGCACAAGGCAGCGGCGAGTACTTCACGCGCCTCGGA
GTTGGCACACCCCCTAGGTATGTCTACATGGTCTTAGACACCGGTAGCGACGTCGTTTGG
ATACAGTGCGCTCCGTGCAAGAAATGCTACTCTCAAACCGACCCTGTCTTCGACCCTGCC
AAGTCCCGCTCGTTTGCTACCGTACCCTGTCGGTCCCCTTTGTGCCGCAAGCTCGACTCT
TCTGGCTGTAACCGCAGGAACACGTGTCTTTACCAAGTCTCCTACGGAGACGGTTCTATC
ACCGTCGGTGATTTTTCCACTGAAACGCTGACGTTTCGTGGCACCAGAGTTGCGCGCGTG
GCCCTCGGTTGTGGACACGACAATGAGGGCCTCTTCGTTGCTGCTGCGGGCTTATTGGGG
CTCGGTCGTGGGAGGTTGTCATTTCCAACTCAAACCGGTCGCCGGTTCAACCGTAAGTTT
TCTTACTGTTTAGTGGACCGATCCACTTCTGCTAAACCTTCATCGATGGTATTCGGTGAC
TCGGCCGTTTCACGAACCGCCCGGTTCACTCCGTTACTCGCAAACCCTAAGCTCGACACA
TTCTACTATGTTGAACTAGTTGGAATCAGCGTCGGCGGTGCTCATGTCCGCGGCATCACT
GCTTCTTTGTTCAAACTCGATCCGGCCGGTAACGGTGGGGTCATCATAGACTCGGGTACG
TCTGTGACCCGTTTGACCCGACCCGCTTACATCGCATTGCGTGATGCTTTCCGAGCTGGA
GCATCCTCCTTGAAGCGTGCGCCAGACTTTTCGCTGTTTGATACGTGCTTCGATTTGTCG
GGAAAGACGGAAGTGAAGGTGCCCACGGTGGTGTTGCATTTCAGAGGTGCAGATGTGTCG
TTGCCGGCGACTAATTATCTAATACCCGTGGATAGTAGCGGAACATTTTGCTTTGCATTT
GCAGGAACCATGAGCGGGTTGTCGATAATTGGAAATATTCAGCAACAGGGCTTCCGGGTT
GTTTATGACTTGGCCGCTTCACGGATCGGGTTTGCTCCGCGCGGGTGCGCTTGAGGTTGC
ATTGCGCGTGGGTGTAGTTGTAAGGGAAAAACTCTCTTTTCCTGTTAATTATTCTGTCTC
TGCGTGTTTTGTTTTATTTTATTTCTTTTTTTTTTGGGGAATATGAAAAAAATCTTTCCT
GGATATGAGTCTGAGAAAGGAGATGGAGAAGAGAAGGGGGAAAAATGATAAAATAATCAG
AGTGCAGGTGATAAGGTTTATAATTCACATATTTGTCTCTGTTAAATTATGAAATGCTTT
TAATCAGTCTTCTAAAAGAAAAAAAAAATCATAACTCTAGTACAAGGGTAAGATGGTTAA
TTTAAAAAAAAATTGTCAAATTGAACTTTTAATAATAAAATACTATTCACAGTTTTTTTT
TTTTTTCCTTTGCTTTGATTTGGAAGTGTACACCGTTTATTTGCAATTTAACTGACGTTT
AGTTCAGCAATCATCGGAGATTTAACTCCTGAGGATAGGCATTGATATTTGCTGCGTATG
CTTTTAGGACGACCCACTACCCCCATTACACTATATATCATTTGGAGGGCAGTCGGTGGT
GCCATCGCCACCCGGTCTGGCCGGTTAAATAAACGGCTGGAATGTCATTATATGTTTTCC
TCCCCTCCCAGGAAGCAAATGAAAT