Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00500.2
CDS Infomation

gene=orange1.1t00500
Sequence

ATGGAACTGCATAGCATTGAATGTGTGCCATCCTCAGATTTGACTGATGAGGATGAGATC
CATCACCATCGCCCCCATCAGTTTCCTTCTATTTCAAAGCCTCACAATAACTGCAATAAT
AATAACACTAGTCTCGCTTCTGTTATTAATCCTGGCACCACCAGTGTCCATGAACTTCTT
GAATGTCCAGTTTGTACTAATTCAATGTATCCTCCTATTCATCAGTGCCACAATGGGCAT
ACGCTCTGTTCAACCTGTAAAACAAGAGTACATAATCGGTGCCCCACTTGTAGGCAGGAG
CTTGGTGATATAAGGTGTCTAGCATTAGAGAAGGTGGCTGAATCACTTGAACTACCCTGC
AAATACATGTCGCTTGGATGCCCAGAGATCTTCCCTTATTACAGCAAACTTAAGCATGAG
GCTATATGTAACTTCAGACCTTACAATTGTCCATATGCTGGATCAGAGTGCTCCATAGTT
GGTGATATTCCCTTCCTTGTTGCTCATCTGAGGGATGATCACAAAGTAGATATGCATTCT
GGGTGCACTTTCAACCATCGCTATGTCAAGTCTAATCCTCATGAAGTAGAAAATGCCACA
TGGATGTTAACTGTTTTCCACTGTTTTGGCCAGTACTTCTGCCTACATTTTGAAGCTTTC
CAGCTGGGGATGGCTCCAGTGTACATGGCATTCCTCCGATTCATGGGTGATGAGACAGAA
GCCAGGAATTACACCTACAGTCTAGAGGTTGGAGGAAATGGACGGAAGCTTACTTGGGAA
GGCACCCCACGGAGCATCAGAGACAGTCACAAGAAGGTTAGAGACAGTCATGATGGTCTA
ATTATACAGCGTAATATGGCTCTTTTTTTCTCTGGAGGGGACCGGAAAGAGTTGAAGCTG
CGAGTTACCGGACGGATATGGAAAGAACAGCAGAGCCCAGAAGGCGGCGCCTGCATACCC
AACCTCTGTAGTTAG

Peptide Sequence

PEP ID

orange1.1t00500.2
PEP Infomation
Sequence

MELHSIECVPSSDLTDEDEIHHHRPHQFPSISKPHNNCNNNNTSLASVINPGTTSVHELL
ECPVCTNSMYPPIHQCHNGHTLCSTCKTRVHNRCPTCRQELGDIRCLALEKVAESLELPC
KYMSLGCPEIFPYYSKLKHEAICNFRPYNCPYAGSECSIVGDIPFLVAHLRDDHKVDMHS
GCTFNHRYVKSNPHEVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDETE
ARNYTYSLEVGGNGRKLTWEGTPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKL
RVTGRIWKEQQSPEGGACIPNLCS*

Transcript Sequence

Transcript ID

orange1.1t00500.2
Transcript Infomation

gene=orange1.1t00500 CDS=199-1173
Sequence

CCCCCCCCCAAAAAAAAGGACTCATCATTCACTCGCAATTTTACATGTAACAATCATACC
CATCAAGCAAAATTGCCCTCTTTGTTCATAAATTCATCTTCGTCTGCGTTTTGTGCTTTC
AACAGCCCCAATAGAATCATATCCTTGTACGAATTTGCCATAAACTTGGTGAATTTTGGT
TCTCTTTCTGTTATATGAATGGAACTGCATAGCATTGAATGTGTGCCATCCTCAGATTTG
ACTGATGAGGATGAGATCCATCACCATCGCCCCCATCAGTTTCCTTCTATTTCAAAGCCT
CACAATAACTGCAATAATAATAACACTAGTCTCGCTTCTGTTATTAATCCTGGCACCACC
AGTGTCCATGAACTTCTTGAATGTCCAGTTTGTACTAATTCAATGTATCCTCCTATTCAT
CAGTGCCACAATGGGCATACGCTCTGTTCAACCTGTAAAACAAGAGTACATAATCGGTGC
CCCACTTGTAGGCAGGAGCTTGGTGATATAAGGTGTCTAGCATTAGAGAAGGTGGCTGAA
TCACTTGAACTACCCTGCAAATACATGTCGCTTGGATGCCCAGAGATCTTCCCTTATTAC
AGCAAACTTAAGCATGAGGCTATATGTAACTTCAGACCTTACAATTGTCCATATGCTGGA
TCAGAGTGCTCCATAGTTGGTGATATTCCCTTCCTTGTTGCTCATCTGAGGGATGATCAC
AAAGTAGATATGCATTCTGGGTGCACTTTCAACCATCGCTATGTCAAGTCTAATCCTCAT
GAAGTAGAAAATGCCACATGGATGTTAACTGTTTTCCACTGTTTTGGCCAGTACTTCTGC
CTACATTTTGAAGCTTTCCAGCTGGGGATGGCTCCAGTGTACATGGCATTCCTCCGATTC
ATGGGTGATGAGACAGAAGCCAGGAATTACACCTACAGTCTAGAGGTTGGAGGAAATGGA
CGGAAGCTTACTTGGGAAGGCACCCCACGGAGCATCAGAGACAGTCACAAGAAGGTTAGA
GACAGTCATGATGGTCTAATTATACAGCGTAATATGGCTCTTTTTTTCTCTGGAGGGGAC
CGGAAAGAGTTGAAGCTGCGAGTTACCGGACGGATATGGAAAGAACAGCAGAGCCCAGAA
GGCGGCGCCTGCATACCCAACCTCTGTAGTTAGCGACCGTTGGATCTCATGCATGTCCAG
GCCCACTTGCAGAATTTGTTGTAATATTATTAGCAGATGCAGAAATTACTGAGGATATCT
GAAATATGTATGGATGCTGGAGGCTTAAAGCTGTTATAAATTGTGAATAAGCTTCCTTTT
TCATTGCAGAAATTGGAGTTCTTCTGGCTATATGGCTTCATCAGTGTTGGATGCTGCAGT
CATGATCCTAGGCTATCATTTTTCTGACTAAGACCAACTTTTCTTGATGAGAAATTGCTC
TGCTGGTTTCCAGTCAAACGTAATATAAAATGTTGGCAGGATTCCAAGCTGATAGCTAGC
TTTAGTTAGTTTGTTTCAATCTATGATCCAAATAAATTTAGGTATTTTTGGAAGTCAAGA
TGCTGGTGGAGCTTTGAAGTCAAGTGCTGCCCTGGTTTTGACATTCGAATACAATCCCTT
CAGTTTTGCGAGGTTGAACCAAACAGATTACCTGACAACATGAAGGGATTCAAATCATGG
CTGAGCAAAAGACCTAGGTGGATGTTGAGTTCAATCTAAGTTTGTCACCTCAGTTTTTGT
GCATGGGCGAAGATTTCAGTTTTGAGTGTCAAATGCATTTCAATTTAGTTTAGAGCGAGG
AAAATGATTTCCGTTGTTGAGAATACGAAGAGAGAAATGAAAAACATCAATATATGAGAT
TTACA