Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00498.1
CDS Infomation

gene=orange1.1t00498
Sequence

ATGGACGCTCTTACAATAAAACCAACTTCGAACTCTCTCCGTTTCGGCAAAACCAAACCT
CTGCCGCCAACTCGCTTGTCTTTCTTCAAATTCACTCATTTTAACAAACTCAGAGCCTCT
TCCGTCATCGCCTTTTGCGTCAAAGGTACACCTTCAAATCCCCAAAACCGCCAGCCAGAA
TATAACAATAACAACGATACTGATAATCATAATCATAAAAGGAATTTCCCTGTAAACCCT
TTTTGTGTTTTGTTCCCAATCTTGCAGTCCATCAAAGGCTTGGCCTCTTCGCAAACTAAG
AAATGGGCTTCACGTTTACAAGCTCATAGCAGTCAGTTAGAGAACATCAATGTCATAGAC
CAAAACAGCAACGACTACTTACAAACCGGAGCGTTTGGGGCGGCTTTATTAAGCGTGACG
TCAACCGCTAAAGTCAAAATCAGTCCTTTCGTCGCGACATTGGCGGCGAACCCCACGTTT
GTGTCTGGTTTGTTTGCGTGGATGATAGCGCAATCGACAAAAGTGTTTTTGAATTTCTTT
GTGGAGAGAAAATGGGATTTGAGGTTGTTGTTTGCTTCTGGAGGAATGCCGTCTTCGCAT
TCGGCTCTTTGTACAGCTTTGACTACGTCAGTGGCGCTTTGTCATGGAGTGGCAGACTCG
TTATTTCCTGTTTGTTTGGGGTTTAGTTTGATTGTTATGTATGATGCTATTGGTGTTAGA
CGCCATGCTGGGATGCAAGCTGAGGTTCTTAATATGATTGTTGAGGACTTGTTTCAGGGT
CATCCCATCAGTCAAAGAAAACTTAAGGAACTTCTTGGCCACACCCCATCCCAGGTCTTT
GCTGGAGCTATGCTAGGTATTCTAGTGGCTTGTTTCTGCTGTCAGAGTTGCTCAGTTGCA
ACCTAA

Peptide Sequence

PEP ID

orange1.1t00498.1
PEP Infomation
Sequence

MDALTIKPTSNSLRFGKTKPLPPTRLSFFKFTHFNKLRASSVIAFCVKGTPSNPQNRQPE
YNNNNDTDNHNHKRNFPVNPFCVLFPILQSIKGLASSQTKKWASRLQAHSSQLENINVID
QNSNDYLQTGAFGAALLSVTSTAKVKISPFVATLAANPTFVSGLFAWMIAQSTKVFLNFF
VERKWDLRLLFASGGMPSSHSALCTALTTSVALCHGVADSLFPVCLGFSLIVMYDAIGVR
RHAGMQAEVLNMIVEDLFQGHPISQRKLKELLGHTPSQVFAGAMLGILVACFCCQSCSVA
T*

Transcript Sequence

Transcript ID

orange1.1t00498.1
Transcript Infomation

gene=orange1.1t00498 CDS=137-1042
Sequence

CATTCGGCAAATGCTCTCTTCTCCAACAATCCAGGCCAGTTTCTTTTCTTCACACACAAG
TACACGACCTTCCCAATTCTCTCCTTGAAATGCAATCTGAACTTTTAAGACGCAAAAACA
TTATCTCCCGACTTCCATGGACGCTCTTACAATAAAACCAACTTCGAACTCTCTCCGTTT
CGGCAAAACCAAACCTCTGCCGCCAACTCGCTTGTCTTTCTTCAAATTCACTCATTTTAA
CAAACTCAGAGCCTCTTCCGTCATCGCCTTTTGCGTCAAAGGTACACCTTCAAATCCCCA
AAACCGCCAGCCAGAATATAACAATAACAACGATACTGATAATCATAATCATAAAAGGAA
TTTCCCTGTAAACCCTTTTTGTGTTTTGTTCCCAATCTTGCAGTCCATCAAAGGCTTGGC
CTCTTCGCAAACTAAGAAATGGGCTTCACGTTTACAAGCTCATAGCAGTCAGTTAGAGAA
CATCAATGTCATAGACCAAAACAGCAACGACTACTTACAAACCGGAGCGTTTGGGGCGGC
TTTATTAAGCGTGACGTCAACCGCTAAAGTCAAAATCAGTCCTTTCGTCGCGACATTGGC
GGCGAACCCCACGTTTGTGTCTGGTTTGTTTGCGTGGATGATAGCGCAATCGACAAAAGT
GTTTTTGAATTTCTTTGTGGAGAGAAAATGGGATTTGAGGTTGTTGTTTGCTTCTGGAGG
AATGCCGTCTTCGCATTCGGCTCTTTGTACAGCTTTGACTACGTCAGTGGCGCTTTGTCA
TGGAGTGGCAGACTCGTTATTTCCTGTTTGTTTGGGGTTTAGTTTGATTGTTATGTATGA
TGCTATTGGTGTTAGACGCCATGCTGGGATGCAAGCTGAGGTTCTTAATATGATTGTTGA
GGACTTGTTTCAGGGTCATCCCATCAGTCAAAGAAAACTTAAGGAACTTCTTGGCCACAC
CCCATCCCAGGTCTTTGCTGGAGCTATGCTAGGTATTCTAGTGGCTTGTTTCTGCTGTCA
GAGTTGCTCAGTTGCAACCTAACAAGCAGGCAATATTTTGCAAGATTTTTTATGTCATGG
TCAAATTGCTTTTGCTCTTTTGTATGCCCTGCTGAGTTATATTGTATCCTATTGAGTATA
AATGACCTGAAACTGTAGTAAAAAATGGTAGAATTTTTTTGTTTCCATAACTGGAATCAT
ATTTCTTGGTACCCTACTGTGATGCTTAAAAGTAATTCAAATCAAATATAAACAGTATGA
ACAATGTGCTTAACA