Plant GARDEN
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TOP > About the Species(Citrus sinensis ) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Citrus sinensis

CDS Sequence

CDS ID

orange1.1t00472.1
CDS Infomation

gene=orange1.1t00472
Sequence

ATGAAAAGGTCGACGATGGATAGGGATCAAAATATTCTTATTACTGAGCTAGCACAAGGG
AAAGAGCTAGCTAAGCGGCTTAGGAATCATCTGAATCCATCTTCCTCTCCAGAAACTCGC
GAATTCTTAGTACAAGAGATTCTTTCTTCTTATGAGAAAGCACTTTCAATGCTAAATTAT
AGTCATTCTCTCCAGTCCAATAAGCTCGACATCACCATGGTTGAATCACCACGTTCTTTT
CCCAACACTGCTACTAGCCCAAGAAGCGATGCTTCTGATCAAGACTATTGTAAAGATGTC
GTATCCAAGAAGAGAAAGACAATGCCTCAATGGACTGAACAAGTAAAGGTTACCTCGGGG
ACAGCATTGGAAGGGACTCTTGATGATGGTTATTGCTGGAGAAAATATGGCCAGAAAGAT
ATTCTTGGTCGTAATTTTCCAAGAGGGTATTACAGGTGCACCCATCGTCATGCCCGAGGT
TGTTTAGCAACTAAACAAGTTCAAAGATCCGACGATGACCCTTCAATGTTTGAAGTGACA
TATCGAGGGAGACATAAGTGTAGCCAAAACTCTCATTTAGCATTGGCTTCGACTTCATCA
ACAAAGCAAGTGTCCATTGATCAGAAGAATCCTTGTTGCAATCAACAAAAAGAGAGTGAA
GAAAAGCCGAAAGAAGCAAATGGGGTAATGCTCAACTTTGGAGCAGAGCTTAGAGTTAAG
AGTGAGGACTTGGACGCCGCAGAGAGCATCTTTTCTCCATTTTCTTTTCCACATGAATCA
ATTGGACAAGAAAATATTAATGTTGAAGACAACTTGTTTTTGGATGGTATGATAGACAAC
AATTTCATGGGTGGTTTTTCGCCAACGTTTATTTCACCGGCAACATCAGAATCCAACTAC
TTCTCAATGTCACCGTGCCACATGACCAACTTTGGACTTGGCTACGATGTGCAAACTCCG
GAGTCTGATCTCAAAGCTGAGATAATTTCAACTCCAACTTCAGTCATCAACTCACCATTT
GGGGACTTTGATTTCTCGCTTACAAAGGAAGATTTGGACCCAAATTTTCAGTTTGACGAC
TTGGATTGCTTCTAG

Peptide Sequence

PEP ID

orange1.1t00472.1
PEP Infomation
Sequence

MKRSTMDRDQNILITELAQGKELAKRLRNHLNPSSSPETREFLVQEILSSYEKALSMLNY
SHSLQSNKLDITMVESPRSFPNTATSPRSDASDQDYCKDVVSKKRKTMPQWTEQVKVTSG
TALEGTLDDGYCWRKYGQKDILGRNFPRGYYRCTHRHARGCLATKQVQRSDDDPSMFEVT
YRGRHKCSQNSHLALASTSSTKQVSIDQKNPCCNQQKESEEKPKEANGVMLNFGAELRVK
SEDLDAAESIFSPFSFPHESIGQENINVEDNLFLDGMIDNNFMGGFSPTFISPATSESNY
FSMSPCHMTNFGLGYDVQTPESDLKAEIISTPTSVINSPFGDFDFSLTKEDLDPNFQFDD
LDCF*

Transcript Sequence

Transcript ID

orange1.1t00472.1
Transcript Infomation

gene=orange1.1t00472 CDS=685-1779
Sequence

CGCGGAACAAGCTTTGAAGATTCTTATTTCTTGGTTCCAACTTCCACGTCACTCACTTTC
TTTTCGCTAAATAATTTTAGATTTTCTTTTCTTTTCACTTTTCTTCGTTGTTATATTCTT
CAACTTCAATCAGTGATTCATACACTAAACTAAAGAATAAAAAGGGGAGAGAGAAGGGGT
TGAATCGGTCACCATTAGACATTTGGACCTTCTCTCGCTCACTACTGTTCAGTATTATTA
AATACTTAAAGGTGCATCTCTCTCTCTCTCTCCATAGACATGTATAAAACAACCCCACTC
CCATGACCGGAAAGAACGTAGTTCATTTCAGGAAATCAAAAAACACGACTCAGTCAAAAG
TTGATCTCTCTTCCTTCTTATTTCTGTCCAATATCCTCTACTCTTTCGCCTCAGCTTCAA
CTCTCGTTCACTACGAAAGCACTTTTCTTCTTTTCTTAATCTTCTTCCTTCAAGTAATCA
ATTCGCATGATCTTGATTACTAGAGCACTTGTGTAACCGAATAAAACAAAATTCAAGATT
TAGAGTGGTTTTGGTCACATCCTAGCTCACATTTTGGTTCCTTTGCTCGTATGAATTGGA
CTTGCTAGTGATCTCTCTGCTCAGACTCGTACGGATTCCGGTACTTAGTGTTTCGTCAAT
TGGTTGCTAGGGAATTGTTCAGATATGAAAAGGTCGACGATGGATAGGGATCAAAATATT
CTTATTACTGAGCTAGCACAAGGGAAAGAGCTAGCTAAGCGGCTTAGGAATCATCTGAAT
CCATCTTCCTCTCCAGAAACTCGCGAATTCTTAGTACAAGAGATTCTTTCTTCTTATGAG
AAAGCACTTTCAATGCTAAATTATAGTCATTCTCTCCAGTCCAATAAGCTCGACATCACC
ATGGTTGAATCACCACGTTCTTTTCCCAACACTGCTACTAGCCCAAGAAGCGATGCTTCT
GATCAAGACTATTGTAAAGATGTCGTATCCAAGAAGAGAAAGACAATGCCTCAATGGACT
GAACAAGTAAAGGTTACCTCGGGGACAGCATTGGAAGGGACTCTTGATGATGGTTATTGC
TGGAGAAAATATGGCCAGAAAGATATTCTTGGTCGTAATTTTCCAAGAGGGTATTACAGG
TGCACCCATCGTCATGCCCGAGGTTGTTTAGCAACTAAACAAGTTCAAAGATCCGACGAT
GACCCTTCAATGTTTGAAGTGACATATCGAGGGAGACATAAGTGTAGCCAAAACTCTCAT
TTAGCATTGGCTTCGACTTCATCAACAAAGCAAGTGTCCATTGATCAGAAGAATCCTTGT
TGCAATCAACAAAAAGAGAGTGAAGAAAAGCCGAAAGAAGCAAATGGGGTAATGCTCAAC
TTTGGAGCAGAGCTTAGAGTTAAGAGTGAGGACTTGGACGCCGCAGAGAGCATCTTTTCT
CCATTTTCTTTTCCACATGAATCAATTGGACAAGAAAATATTAATGTTGAAGACAACTTG
TTTTTGGATGGTATGATAGACAACAATTTCATGGGTGGTTTTTCGCCAACGTTTATTTCA
CCGGCAACATCAGAATCCAACTACTTCTCAATGTCACCGTGCCACATGACCAACTTTGGA
CTTGGCTACGATGTGCAAACTCCGGAGTCTGATCTCAAAGCTGAGATAATTTCAACTCCA
ACTTCAGTCATCAACTCACCATTTGGGGACTTTGATTTCTCGCTTACAAAGGAAGATTTG
GACCCAAATTTTCAGTTTGACGACTTGGATTGCTTCTAGGTTATTAAATAAATATGGGAT
AGATGTTGCACTTGGAGACCCTAGCCAGCGTATACTCAAATTAATTGTACAATAAGATAA
GAAAGTCTCCATTTATATGGAGCTGGCCAAGAGAGTTTTCTTGATTTGGCAGTTGATTTT
GGAAATTATATAAATTGTAACTTTTTTTTTTCTTTTTTCTTCTCTTCTCTTCTCTTCTCT
CCATTGTTGTTTGAATCTAGGCAATAAATTATTTGTCTCGTGTAAAATTTTCTGACTAAT
AAGCTACATCACTGCTACATATTTCTTACGCTTGAAAAGGAAAAATGATTTTAAGATTTA
AAATGATCCAATTACAAAGTTCATATATTCACTCACAATACAAATCTACGGTATTGTTTG
CGGC